Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold68G22836 Striga asiatica HOM05D035048 ORTHO05D000004 2.3e-173 612.1 294 100.0
SGA_v2.0_scaffold52G18930 Striga asiatica HOM05D035048 ORTHO05D012821 2.8e-14 83.6 94 37.2
SGA_v2.0_scaffold242G44251 Striga asiatica HOM05D023911 ORTHO05D000004 6.3e-14 82.4 88 45.5
SGA_v2.0_scaffold26G11219 Striga asiatica HOM05D035048 ORTHO05D000004 4.5e-12 76.3 85 35.3
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 1.0e-11 75.1 88 37.5
PSO478G1708 Papaver somniferum HOM05D000003 ORTHO05D006738 3.8e-11 73.2 116 32.8
SGA_v2.0_scaffold140G35467 Striga asiatica HOM05D000003 ORTHO05D000004 3.8e-11 73.2 75 45.3
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 1.9e-10 70.9 95 31.6
BcaB08g34297 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-10 70.1 93 38.7
SGA_v2.0_scaffold191G40503 Striga asiatica HOM05D000003 ORTHO05D000004 1.2e-09 68.2 95 35.8
Aa31LG8G11190 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.1e-09 67.4 118 29.7
RcHm_v2.0_Chr4g0417671 Rosa chinensis HOM05D000003 ORTHO05D000004 2.1e-09 67.4 95 36.8
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 2.1e-09 67.4 95 34.7
FvH4_7g10351 Fragaria vesca HOM05D000003 ORTHO05D000004 8.0e-09 65.5 93 39.8
BcaC04g23343 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-08 64.7 96 37.5
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 1.4e-08 64.7 91 39.6
Aa31LG8G12700 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.8e-08 64.3 155 27.7
Rhsim01G0174200 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.8e-08 64.3 129 27.1
Atru.chr5.2535 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-08 63.9 92 37.0
Aa31sc808G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.3e-08 63.9 92 33.7
Rhsim05G0074900 Rhododendron simsii HOM05D000542 ORTHO05D000202 2.3e-08 63.9 99 36.4
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 3.0e-08 63.5 95 30.5
SGA_v2.0_scaffold275G46581 Striga asiatica HOM05D000003 ORTHO05D000004 3.0e-08 63.5 95 34.7
BcaC09g49394 Brassica carinata HOM05D000003 ORTHO05D000411 6.7e-08 62.4 105 29.5
Manes.12G101201 Manihot esculenta HOM05D000003 ORTHO05D000004 6.7e-08 62.4 98 33.7
Sed0007758 Sechium edule HOM05D000003 ORTHO05D000004 6.7e-08 62.4 92 33.7
Aa31LG3G5890 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.8e-08 62.0 154 27.3
PSO675G5546 Papaver somniferum HOM05D000003 ORTHO05D000004 8.8e-08 62.0 128 26.6
TAR536G0009 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.2e-07 61.6 89 32.6
BcaC07g39692 Brassica carinata HOM05D000003 ORTHO05D001091 1.5e-07 61.2 95 29.5
PSO017G1214 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-07 61.2 88 36.4
BraA04t16803Z Brassica rapa HOM05D000003 ORTHO05D001498 2.0e-07 60.8 100 31.0
CANSAT11G1105 Cannabis sativa HOM05D000003 ORTHO05D000004 2.0e-07 60.8 96 33.3
Sed0010093 Sechium edule HOM05D000003 ORTHO05D000004 2.0e-07 60.8 92 33.7
CANSAT54G1058 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-07 60.5 92 31.5
Manes.10G073737 Manihot esculenta HOM05D000003 ORTHO05D000004 2.6e-07 60.5 98 33.7
QL12p023981 Quercus lobata HOM05D000003 ORTHO05D000004 2.6e-07 60.5 87 34.5
Rhsim11G0146500 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.6e-07 60.5 95 32.6
Aa31LG11G5340 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.3e-07 60.1 96 27.1
Aa31LG9G3910 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.3e-07 60.1 107 28.0
PSO210G3379 Papaver somniferum HOM05D000003 ORTHO05D000004 3.3e-07 60.1 95 30.5
Atru.chr10.527 Acer truncatum HOM05D000003 ORTHO05D000004 4.4e-07 59.7 92 34.8
Aa31LG2G18130 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.4e-07 59.7 96 27.1
Aa31LG7G12310 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.4e-07 59.7 95 33.7
Aa31LG8G12860 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.4e-07 59.7 95 29.5
BcaC06g36308 Brassica carinata HOM05D000003 ORTHO05D001091 4.4e-07 59.7 95 29.5
CANSAT56G2394 Cannabis sativa HOM05D000003 ORTHO05D000004 4.4e-07 59.7 92 31.5
Atru.chr2.2758 Acer truncatum HOM05D000003 ORTHO05D000167 5.7e-07 59.3 158 25.3
Atru.chr5.2450 Acer truncatum HOM05D000003 ORTHO05D000004 5.7e-07 59.3 92 35.9
Aa31LG5G21260 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.7e-07 59.3 97 32.0
CiPaw.03G161400 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.7e-07 59.3 95 31.6
PSO478G5133 Papaver somniferum HOM05D008740 ORTHO05D006738 5.7e-07 59.3 105 34.3
Aa31LG3G12250 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.5e-07 58.9 96 33.3
Aa31sc113G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.5e-07 58.9 95 29.5
CANSAT64G1779 Cannabis sativa HOM05D000003 ORTHO05D000004 7.5e-07 58.9 91 30.8
FvH4_4g09142 Fragaria vesca HOM05D000003 ORTHO05D000004 9.7e-07 58.5 120 27.5
Aa31LG7G2740 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-06 58.2 96 29.2
AUR62003020 Chenopodium quinoa HOM05D000003 ORTHO05D000004 1.3e-06 58.2 99 33.3
SGA_v2.0_scaffold142G35659 Striga asiatica HOM05D016777 ORTHO05D026198 1.3e-06 58.2 96 29.2
Aa31LG7G3330 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-06 57.8 95 30.5
BcaC01g02801 Brassica carinata HOM05D000003 ORTHO05D000004 1.7e-06 57.8 95 31.6
BolC3t18275H Brassica oleracea HOM05D000003 ORTHO05D001498 1.7e-06 57.8 95 31.6
SGA_v2.0_scaffold43G16397 Striga asiatica HOM05D009140 ORTHO05D010215 1.7e-06 57.8 88 29.5
Aa31LG11G4970 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-06 57.4 126 27.0
BcaB01g02268 Brassica carinata HOM05D000003 ORTHO05D000411 2.2e-06 57.4 95 31.6
BcaB05g24532 Brassica carinata HOM05D000003 ORTHO05D001091 2.2e-06 57.4 95 28.4
BcaC08g47082 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-06 57.4 88 34.1
CiPaw.08G120100 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.2e-06 57.4 89 32.6
QL04p048956 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-06 57.4 81 38.3
SGA_v2.0_scaffold6G03466 Striga asiatica HOM05D000003 ORTHO05D000004 2.2e-06 57.4 96 31.2
Aa31LG11G9560 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.8e-06 57.0 106 28.3
Aa31sc165G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.8e-06 57.0 104 28.8
Aa31sc256G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.8e-06 57.0 95 32.6
Aqoxy7G01885 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.8e-06 57.0 85 35.3
CANSAT78G2405 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-06 57.0 96 29.2
CANSAT80G0055 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-06 57.0 95 30.5
Aa31LG2G13330 Aethionema arabicum HOM05D000003 ORTHO05D001091 3.7e-06 56.6 95 29.5
Aa31LG9G15190 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.7e-06 56.6 95 31.6
BraA06t23592Z Brassica rapa HOM05D001350 ORTHO05D001091 3.7e-06 56.6 80 28.8
CiPaw.10G104100 Carya illinoinensis HOM05D000003 ORTHO05D000167 3.7e-06 56.6 92 32.6
CiPaw.15G073500 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.7e-06 56.6 96 32.3
FvH4_4g08194 Fragaria vesca HOM05D000003 ORTHO05D000004 3.7e-06 56.6 95 29.5
PSO210G7063 Papaver somniferum HOM05D000003 ORTHO05D000004 3.7e-06 56.6 73 39.7
Aa31LG1G9570 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.8e-06 56.2 95 26.3
CANSAT78G2409 Cannabis sativa HOM05D000003 ORTHO05D000004 4.8e-06 56.2 96 36.5
SGA_v2.0_scaffold174G39221 Striga asiatica HOM05D000754 ORTHO05D000169 4.8e-06 56.2 66 36.4
BcaC03g16750 Brassica carinata HOM05D000003 ORTHO05D012821 6.3e-06 55.8 100 35.0
Atru.chr5.1666 Acer truncatum HOM05D000003 ORTHO05D000004 8.2e-06 55.5 95 34.7
Aa31sc407G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.2e-06 55.5 95 31.6
BraA06t25657Z Brassica rapa HOM05D000003 ORTHO05D000004 8.2e-06 55.5 156 23.7
CiPaw.16G041700 Carya illinoinensis HOM05D000003 ORTHO05D000004 8.2e-06 55.5 89 31.5


User provided reference genes

Program Settings