Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold68G22804 Striga asiatica HOM05D005491 ORTHO05D006973 4.1e-113 411.4 203 100.0
SGA_v2.0_scaffold4G02103 Striga asiatica HOM05D005491 ORTHO05D006973 2.0e-67 259.6 201 66.2
Migut.D00894 Erythranthe guttata HOM05D005491 ORTHO05D006973 1.9e-54 216.5 200 56.0
SalBow7G0632 Salvia bowleyana HOM05D005491 ORTHO05D006973 7.6e-51 204.5 201 54.7
Dinv20356 Davidia involucrata HOM05D005491 ORTHO05D006973 3.8e-50 202.2 199 52.8
GSVIVG01016137001 Vitis vinifera HOM05D005491 ORTHO05D006973 3.9e-47 192.2 192 52.1
PGR102G1295 Punica granatum HOM05D005491 ORTHO05D006973 6.6e-47 191.4 193 54.4
Potri.010G250200 Populus trichocarpa HOM05D005491 ORTHO05D006973 8.7e-47 191.0 196 51.0
TAR383G0879 Trochodendron aralioides HOM05D005491 ORTHO05D006973 1.1e-46 190.7 194 51.5
Eucgr.F04012 Eucalyptus grandis HOM05D005491 ORTHO05D006973 2.5e-46 189.5 200 50.5
A05p27490 Brassica napus HOM05D005491 ORTHO05D006973 3.3e-46 189.1 194 48.5
BraA05t21640Z Brassica rapa HOM05D005491 ORTHO05D006973 3.3e-46 189.1 194 48.5
Carub.0003s2116 Capsella rubella HOM05D005491 ORTHO05D006973 5.6e-46 188.3 194 49.0
RcHm_v2.0_Chr2g0150111 Rosa chinensis HOM05D005491 ORTHO05D006973 5.6e-46 188.3 202 50.0
CSS0040638 Camellia sinensis var. sinensis HOM05D005491 ORTHO05D006973 9.6e-46 187.6 195 51.8
Nitab4.5_0002885g0050 Nicotiana tabacum HOM05D005491 ORTHO05D006973 9.6e-46 187.6 198 50.0
vmacro17061 Vaccinium macrocarpon HOM05D005491 ORTHO05D006973 2.1e-45 186.4 200 48.5
C01p43060 Brassica napus HOM05D005491 ORTHO05D006973 3.6e-45 185.7 194 49.5
BolC1t04253H Brassica oleracea HOM05D005491 ORTHO05D006973 3.6e-45 185.7 194 49.5
BcaC09g49056 Brassica carinata HOM05D005491 ORTHO05D006973 6.2e-45 184.9 194 49.0
CARHR097080 Cardamine hirsuta HOM05D005491 ORTHO05D006973 1.4e-44 183.7 194 48.5
COL.COLO4_31205 Corchorus olitorius HOM05D005491 ORTHO05D006973 1.4e-44 183.7 193 47.7
Thecc.06G064400 Theobroma cacao HOM05D005491 ORTHO05D006973 1.4e-44 183.7 192 49.5
CAN.G790.23 Capsicum annuum HOM05D005491 ORTHO05D006973 1.8e-44 183.3 195 49.7
Ciclev10026115m.g Citrus clementina HOM05D005491 ORTHO05D006973 1.8e-44 183.3 192 52.1
Nitab4.5_0001691g0110 Nicotiana tabacum HOM05D005491 ORTHO05D006973 1.8e-44 183.3 198 49.0
BcaC05g28263 Brassica carinata HOM05D005491 ORTHO05D006973 2.4e-44 183.0 194 47.9
C05p42580 Brassica napus HOM05D005491 ORTHO05D006973 2.4e-44 183.0 194 47.9
BolC5t32978H Brassica oleracea HOM05D005491 ORTHO05D006973 2.4e-44 183.0 194 47.9
Oeu023761.1 Olea europaea HOM05D005491 ORTHO05D006973 2.4e-44 183.0 180 55.0
Rhsim12G0214300 Rhododendron simsii HOM05D005491 ORTHO05D006973 2.4e-44 183.0 195 49.7
AL3G35200 Arabidopsis lyrata HOM05D005491 ORTHO05D006973 3.1e-44 182.6 197 47.7
CANSAT01G1753 Cannabis sativa HOM05D005491 ORTHO05D006973 3.1e-44 182.6 193 49.7
Lj6C21T3 Lonicera japonica HOM05D005491 ORTHO05D006973 3.1e-44 182.6 199 47.2
PGSC0003DMG400009162 Solanum tuberosum HOM05D005491 ORTHO05D006973 4.0e-44 182.2 194 50.5
A01p33690 Brassica napus HOM05D005491 ORTHO05D006973 5.3e-44 181.8 193 49.2
MD09G1158800 Malus domestica HOM05D005491 ORTHO05D006973 5.3e-44 181.8 193 51.8
Sp3g19180 Schrenkiella parvula HOM05D005491 ORTHO05D006973 5.3e-44 181.8 194 46.9
MELO3C006296.2 Cucumis melo HOM05D005491 ORTHO05D006973 6.9e-44 181.4 192 50.0
Manes.16G045400 Manihot esculenta HOM05D005491 ORTHO05D006973 6.9e-44 181.4 193 52.3
Atru.chr1.2698 Acer truncatum HOM05D005491 ORTHO05D006973 1.2e-43 180.6 193 49.7
FvH4_6g37280 Fragaria vesca HOM05D005491 ORTHO05D006973 1.2e-43 180.6 192 51.0
Gorai.009G118600 Gossypium raimondii HOM05D005491 ORTHO05D006973 1.2e-43 180.6 189 49.7
BcaNung05297 Brassica carinata HOM05D005491 ORTHO05D006973 1.5e-43 180.3 194 47.4
BraA01t03481Z Brassica rapa HOM05D005491 ORTHO05D006973 1.5e-43 180.3 193 48.7
CsaV3_3G010780 Cucumis sativus L. HOM05D005491 ORTHO05D006973 1.5e-43 180.3 192 49.5
Gohir.D05G114500 Gossypium hirsutum HOM05D005491 ORTHO05D006973 1.5e-43 180.3 189 50.3
Hund18611 Selenicereus undatus HOM05D005491 ORTHO05D006973 1.5e-43 180.3 194 47.9
Sc15g0000930 Simmondsia chinensis HOM05D005491 ORTHO05D006973 1.5e-43 180.3 192 49.0
BcaB06g26202 Brassica carinata HOM05D005491 ORTHO05D006973 2.0e-43 179.9 194 47.9
Duzib192G0032 Durio zibethinus HOM05D005491 ORTHO05D006973 3.4e-43 179.1 193 48.2
AT3G21200 Arabidopsis thaliana HOM05D005491 ORTHO05D006973 4.5e-43 178.7 197 46.7
Ah.15g094670 Amaranthus hybridus HOM05D005491 ORTHO05D006973 7.6e-43 177.9 192 46.4
PSO063G4509 Papaver somniferum HOM05D005491 ORTHO05D006973 9.9e-43 177.6 194 47.9
Aa31LG8G7890 Aethionema arabicum HOM05D005491 ORTHO05D006973 1.7e-42 176.8 190 47.9
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 1.7e-42 176.8 198 46.0
CiPaw.02G049600 Carya illinoinensis HOM05D005491 ORTHO05D006973 2.2e-42 176.4 189 50.3
Sed0027406 Sechium edule HOM05D005491 ORTHO05D006973 2.2e-42 176.4 191 49.2
Thhalv10021146m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 2.9e-42 176.0 194 46.9
Thhalv10021148m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 2.9e-42 176.0 194 46.9
Sed0002659 Sechium edule HOM05D005491 ORTHO05D006973 2.9e-42 176.0 192 49.5
AUR62025582 Chenopodium quinoa HOM05D005491 ORTHO05D006973 3.8e-42 175.6 197 46.2
FAN02G3895 Fragaria x ananassa HOM05D005491 ORTHO05D006973 4.9e-42 175.3 204 49.0
VMungo0647G0411 Vigna mungo HOM05D005491 ORTHO05D006973 6.4e-42 174.9 200 47.0
FAN14G5581 Fragaria x ananassa HOM05D005491 ORTHO05D005725 8.4e-42 174.5 204 49.0
Glyma.08G222600 Glycine max HOM05D005491 ORTHO05D006973 1.1e-41 174.1 202 47.0
THA.LOC104817926 Tarenaya hassleriana HOM05D005491 ORTHO05D006973 1.1e-41 174.1 194 47.4
Lalb_Chr04g0264721 Lupinus albus HOM05D005491 ORTHO05D006973 1.4e-41 173.7 196 47.4
FAN09G1743 Fragaria x ananassa HOM05D005491 ORTHO05D006973 4.2e-41 172.2 204 48.5
Nn2g12576 Nelumbo nucifera HOM05D005491 ORTHO05D006973 4.2e-41 172.2 193 46.6
PSO782G2961 Papaver somniferum HOM05D005491 ORTHO05D006973 4.2e-41 172.2 194 46.9
Phvul.008G255600 Phaseolus vulgaris HOM05D005491 ORTHO05D006973 1.2e-40 170.6 200 46.0
TPR.G38706 Trifolium pratense HOM05D005491 ORTHO05D006973 1.2e-40 170.6 199 46.2
EL10Ac7g18224 Beta vulgaris HOM05D005491 ORTHO05D006973 1.6e-40 170.2 213 43.2
Lj6A3G42 Lonicera japonica HOM05D005491 ORTHO05D006973 2.1e-40 169.9 189 46.0
Psat7g263520 Pisum sativum HOM05D005491 ORTHO05D006973 6.0e-40 168.3 196 45.4
TWI18G1464 Tripterygium wilfordii HOM05D005491 ORTHO05D006973 6.0e-40 168.3 190 49.5
DCAR_007669 Daucus carota HOM05D005491 ORTHO05D006973 7.9e-40 167.9 194 46.9
BcaB04g20605 Brassica carinata HOM05D005491 ORTHO05D006973 1.3e-39 167.2 194 46.4
Cc04_g00370 Coffea canephora HOM05D005491 ORTHO05D006973 1.3e-39 167.2 205 46.8
Lj3g0002967 Lotus japonicus HOM05D005491 ORTHO05D006973 1.3e-39 167.2 206 44.2
ClCG05G003150 Citrullus lanatus HOM05D005491 ORTHO05D006973 3.0e-39 166.0 212 44.3
Peaxi162Scf00038g02533 Petunia axillaris HOM05D005491 ORTHO05D006973 3.9e-39 165.6 200 47.5
Sopen03g041620 Solanum pennellii HOM05D005491 ORTHO05D006973 6.7e-39 164.9 190 48.4
Ca_20955_v3 Cicer arietinum L. HOM05D005491 ORTHO05D006973 1.1e-38 164.1 212 42.0
Aqoxy7G03200 Aquilegia oxysepala HOM05D005491 ORTHO05D006973 1.9e-38 163.3 192 45.3
Lsat_1_v5_gn_4_88641 Lactuca sativa HOM05D005491 ORTHO05D006973 1.9e-38 163.3 193 44.6
Medtr4g006200 Medicago truncatula HOM05D005491 ORTHO05D006973 2.5e-38 162.9 199 45.2
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 5.6e-38 161.8 181 46.4
Solyc03g123880.3 Solanum lycopersicum HOM05D005491 ORTHO05D006973 5.6e-38 161.8 191 47.1
arahy.Tifrunner.gnm1.ann1.5V72PU Arachis hypogaea HOM05D005491 ORTHO05D006973 2.8e-37 159.5 203 43.8
arahy.Tifrunner.gnm1.ann1.PDFG4L Arachis hypogaea HOM05D005491 ORTHO05D006973 3.7e-37 159.1 203 43.8
CDE02G1684 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 2.0e-35 153.3 190 43.7
ATR0580G202 Amborella trichopoda HOM05D005491 ORTHO05D006973 4.5e-35 152.1 181 44.2
MBI14_g30702_MAGBIO Magnolia biondii HOM05D005491 ORTHO05D006973 2.5e-33 146.4 269 34.9
HanXRQChr09g0277401 Helianthus annuus HOM05D005491 ORTHO05D006973 7.1e-33 144.8 200 45.0
CDE05G1859 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 3.5e-32 142.5 179 42.5
HPP92_013427 Vanilla planifolia HOM05D005491 ORTHO05D006973 2.5e-30 136.3 194 38.1
Sabra10G0194700 Salix brachista HOM05D005491 ORTHO05D006973 1.3e-29 134.0 305 32.1
Gohir.A05G114100 Gossypium hirsutum HOM05D005491 ORTHO05D006973 8.2e-29 131.3 191 42.4
Zm00001eb319280 Zea mays HOM05D005491 ORTHO05D006973 5.0e-26 122.1 195 36.4
Actinidia00637 Actinidia chinensis HOM05D005491 ORTHO05D006973 3.2e-25 119.4 193 37.3
Cfa005563 Carpinus fangiana HOM05D005491 ORTHO05D006973 1.2e-24 117.5 94 64.9
Cpa.g.c38087 Carica papaya HOM05D005491 ORTHO05D006973 1.3e-23 114.0 100 59.0
Prupe.3G167000 Prunus persica HOM05D005491 ORTHO05D006973 5.1e-23 112.1 94 62.8
Haze_10765 Corylus avellana HOM05D005491 ORTHO05D006973 6.7e-23 111.7 95 63.2
Potri.008G008801 Populus trichocarpa HOM05D005491 ORTHO05D006973 8.7e-23 111.3 97 59.8
Actinidia31136 Actinidia chinensis HOM05D005491 ORTHO05D006973 5.7e-22 108.6 127 41.7
Pp3c7_5080 Physcomitrium patens HOM05D005491 ORTHO05D006973 1.6e-21 107.1 195 33.8
ECA232G0321 Erigeron canadensis HOM05D005491 ORTHO05D006973 4.8e-21 105.5 208 34.1
AagrBONN_evm.TU.Sc2ySwM_368.2001 Anthoceros agrestis HOM05D005491 ORTHO05D006973 4.1e-20 102.4 193 32.6
Mapoly0005s0279 Marchantia polymorpha HOM05D005491 ORTHO05D006973 9.4e-17 91.3 195 31.3
Pp3c11_26760 Physcomitrium patens HOM05D005491 ORTHO05D006973 2.3e-15 86.7 135 37.0
Zm00001eb170870 Zea mays HOM05D005491 ORTHO05D006973 2.3e-15 86.7 195 31.8
Glyma.14G098400 Glycine max HOM05D005491 ORTHO05D006973 1.5e-14 84.0 99 42.4
Haze_10760 Corylus avellana HOM05D005491 ORTHO05D006973 4.3e-14 82.4 96 44.8
Haze_10762 Corylus avellana HOM05D005491 ORTHO05D006973 1.7e-13 80.5 57 70.2
Gorai.002G157400 Gossypium raimondii HOM05D005491 ORTHO05D006973 1.1e-12 77.8 48 77.1
Gohir.D01G126833 Gossypium hirsutum HOM05D005491 ORTHO05D006973 1.4e-12 77.4 48 75.0
Gohir.D06G077900 Gossypium hirsutum HOM05D005491 ORTHO05D006973 1.4e-12 77.4 48 77.1
MD17G1145100 Malus domestica HOM05D005491 ORTHO05D006973 6.9e-12 75.1 127 33.9
Gorai.003G079200 Gossypium raimondii HOM05D005491 ORTHO05D006973 2.0e-11 73.6 48 70.8
SEGI_00240 Sequoiadendron giganteum HOM05D005491 ORTHO05D006973 3.4e-11 72.8 95 42.1
Gorai.012G122800 Gossypium raimondii HOM05D005491 ORTHO05D006973 7.7e-11 71.6 48 68.8
Gorai.013G054800 Gossypium raimondii HOM05D005491 ORTHO05D006973 1.3e-10 70.9 48 68.8
Nn6g35127 Nelumbo nucifera HOM05D005491 ORTHO05D006973 1.8e-07 60.5 41 70.7
Medtr4g005800 Medicago truncatula HOM05D005491 ORTHO05D006973 3.0e-07 59.7 69 40.6
Medtr3g006055 Medicago truncatula HOM05D005491 ORTHO05D006973 6.7e-07 58.5 99 34.3
MSTRG.4527 Avicennia marina HOM05D005491 ORTHO05D006973 3.3e-06 56.2 52 50.0


User provided reference genes

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