Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 1.5e-184 649.4 331 100.0
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 1.9e-120 436.4 283 82.3
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 5.3e-118 428.3 283 79.5
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 9.9e-117 424.1 284 78.2
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 9.9e-117 424.1 283 78.8
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 3.2e-115 419.1 283 77.0
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 5.5e-115 418.3 283 77.7
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 2.7e-114 416.0 283 77.4
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 3.5e-114 415.6 283 76.7
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 4.6e-114 415.2 282 77.0
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 7.9e-114 414.5 283 75.3
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 6.7e-113 411.4 283 74.9
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 6.7e-113 411.4 283 76.3
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 6.7e-113 411.4 283 76.7
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 8.7e-113 411.0 285 76.8
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 8.7e-113 411.0 281 75.8
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 1.1e-112 410.6 283 76.3
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 2.5e-112 409.5 283 75.6
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 2.5e-112 409.5 283 76.0
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 4.3e-112 408.7 279 76.7
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 4.3e-112 408.7 283 76.0
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 4.3e-112 408.7 285 76.1
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 5.6e-112 408.3 285 75.4
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 7.4e-112 407.9 281 75.1
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 9.6e-112 407.5 283 75.3
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 1.6e-111 406.8 283 75.3
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 2.1e-111 406.4 297 72.7
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 2.8e-111 406.0 283 75.6
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 2.8e-111 406.0 283 73.5
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 4.8e-111 405.2 283 76.3
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 6.2e-111 404.8 283 76.0
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 8.1e-111 404.4 283 75.6
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 8.1e-111 404.4 283 76.0
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 1.1e-110 404.1 284 74.3
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 1.8e-110 403.3 283 76.0
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 2.4e-110 402.9 283 74.2
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 4.0e-110 402.1 283 75.6
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 4.0e-110 402.1 283 74.2
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 5.3e-110 401.7 283 74.9
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 5.3e-110 401.7 283 73.5
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 6.9e-110 401.4 283 75.3
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 6.9e-110 401.4 283 74.2
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 9.0e-110 401.0 283 74.2
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 9.0e-110 401.0 284 73.2
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 9.0e-110 401.0 283 74.2
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 3.4e-109 399.1 284 75.0
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 3.4e-109 399.1 284 74.3
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 4.5e-109 398.7 283 74.6
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 4.5e-109 398.7 283 74.9
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 4.5e-109 398.7 283 74.6
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 5.8e-109 398.3 283 74.6
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 5.8e-109 398.3 283 75.6
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 1.3e-108 397.1 283 72.4
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 1.3e-108 397.1 283 75.3
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 2.2e-108 396.4 283 74.2
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 2.9e-108 396.0 283 73.9
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 8.4e-108 394.4 283 73.1
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 1.9e-107 393.3 283 73.5
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 2.5e-107 392.9 291 72.5
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 2.5e-107 392.9 283 73.5
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 2.5e-107 392.9 283 72.8
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 2.5e-107 392.9 284 71.1
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 7.1e-107 391.3 283 73.1
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 9.3e-107 391.0 283 72.8
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 4.6e-106 388.7 283 72.4
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 4.6e-106 388.7 283 72.1
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 7.9e-106 387.9 283 71.7
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 3.9e-105 385.6 312 68.3
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 8.7e-105 384.4 283 70.7
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 1.1e-104 384.0 283 70.0
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 1.5e-104 383.6 283 70.7
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 1.5e-104 383.6 283 71.7
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 1.9e-104 383.3 281 71.5
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 2.5e-104 382.9 283 70.7
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 2.5e-104 382.9 314 65.6
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 7.4e-104 381.3 283 70.3
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 1.6e-103 380.2 283 70.7
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 2.8e-103 379.4 270 73.7
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 3.7e-103 379.0 283 68.9
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 4.8e-103 378.6 283 69.6
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 4.8e-103 378.6 280 71.8
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 3.1e-102 375.9 283 70.3
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 2.0e-101 373.2 285 69.8
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 3.4e-101 372.5 280 70.7
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 4.5e-101 372.1 280 70.7
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 4.5e-101 372.1 287 68.6
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 1.0e-100 370.9 287 68.6
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 5.0e-100 368.6 283 69.3
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 6.5e-100 368.2 280 70.4
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 2.2e-95 353.2 283 66.1
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 2.0e-93 346.7 285 64.2
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 2.6e-93 346.3 283 70.7
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 3.4e-93 345.9 303 64.7
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 2.2e-92 343.2 252 73.0
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 1.1e-91 340.9 283 64.0
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 1.9e-91 340.1 291 66.0
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 2.5e-91 339.7 283 64.7
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 6.1e-90 335.1 305 60.7
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 1.4e-89 334.0 283 66.1
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 4.1e-86 322.4 291 62.2
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 2.0e-85 320.1 244 71.7
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 5.3e-78 295.4 283 57.6
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 5.3e-78 295.4 208 74.5
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 4.5e-77 292.4 221 70.1
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.7e-76 290.4 207 73.9
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 2.5e-75 286.6 208 73.1
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 2.5e-75 286.6 256 61.7
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 7.5e-72 275.0 286 53.5
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 3.1e-70 269.6 309 51.1
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 3.7e-63 246.1 283 51.6
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 4.5e-61 239.2 285 49.1
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 3.2e-59 233.0 178 70.8
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 7.2e-59 231.9 176 68.2
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 1.9e-51 207.2 123 82.9
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 3.3e-51 206.5 285 42.1
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 4.9e-39 166.0 108 80.6
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 9.8e-32 141.7 127 59.1
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 2.4e-30 137.1 122 58.2
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 1.9e-27 127.5 114 60.5
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 2.8e-18 97.1 70 64.3
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 4.6e-13 79.7 49 77.6
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 3.6e-10 70.1 49 69.4
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 4.9e-07 59.7 33 72.7


User provided reference genes

Program Settings