Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold67G22735 Striga asiatica HOM05D006656 ORTHO05D008208 3.8e-120 434.9 222 100.0
MSTRG.4156 Avicennia marina HOM05D006656 ORTHO05D008208 1.7e-72 276.6 212 69.3
SalBow3G1837 Salvia bowleyana HOM05D006656 ORTHO05D008208 1.2e-70 270.4 204 70.1
Migut.G00494 Erythranthe guttata HOM05D006656 ORTHO05D008208 5.7e-68 261.5 211 67.8
COL.COLO4_15934 Corchorus olitorius HOM05D006656 ORTHO05D008208 4.7e-62 241.9 202 63.9
Gohir.D09G229300 Gossypium hirsutum HOM05D006656 ORTHO05D008208 2.3e-61 239.6 197 65.5
Gorai.006G252000 Gossypium raimondii HOM05D006656 ORTHO05D008208 2.3e-61 239.6 197 65.5
Dinv29827 Davidia involucrata HOM05D006656 ORTHO05D008208 4.0e-61 238.8 194 66.5
Dinv27090 Davidia involucrata HOM05D006656 ORTHO05D008208 5.2e-61 238.4 191 66.0
Ciclev10006077m.g Citrus clementina HOM05D006656 ORTHO05D008208 8.8e-61 237.7 197 64.5
Thecc.04G260300 Theobroma cacao HOM05D006656 ORTHO05D008208 8.8e-61 237.7 197 65.0
CSS0031602 Camellia sinensis var. sinensis HOM05D006656 ORTHO05D008208 1.5e-60 236.9 198 63.6
Lj6g0027143 Lotus japonicus HOM05D006656 ORTHO05D008208 1.5e-60 236.9 194 65.5
CAN.G220.47 Capsicum annuum HOM05D006656 ORTHO05D008208 2.0e-60 236.5 195 64.6
Glyma.10G005200 Glycine max HOM05D006656 ORTHO05D008208 2.0e-60 236.5 190 65.8
arahy.Tifrunner.gnm1.ann1.CLZM2Q Arachis hypogaea HOM05D006656 ORTHO05D008208 3.4e-60 235.7 190 65.8
Gohir.A09G228200 Gossypium hirsutum HOM05D006656 ORTHO05D008208 3.4e-60 235.7 194 65.5
HanXRQChr01g0022881 Helianthus annuus HOM05D006656 ORTHO05D008208 4.4e-60 235.3 201 62.2
Medtr1g041795 Medicago truncatula HOM05D006656 ORTHO05D008208 5.7e-60 235.0 190 65.3
Solyc09g090430.3 Solanum lycopersicum HOM05D006656 ORTHO05D008208 5.7e-60 235.0 195 63.6
Sopen09g033350 Solanum pennellii HOM05D006656 ORTHO05D008208 5.7e-60 235.0 195 63.6
PGSC0003DMG400017160 Solanum tuberosum HOM05D006656 ORTHO05D008208 7.5e-60 234.6 195 64.1
Nitab4.5_0013448g0010 Nicotiana tabacum HOM05D006656 ORTHO05D008208 9.8e-60 234.2 195 64.1
Eucgr.H02989 Eucalyptus grandis HOM05D006656 ORTHO05D008208 1.3e-59 233.8 201 61.2
FvH4_4g04220 Fragaria vesca HOM05D006656 ORTHO05D008208 1.3e-59 233.8 192 65.1
Peaxi162Scf00602g00515 Petunia axillaris HOM05D006656 ORTHO05D008208 1.3e-59 233.8 197 64.5
RcHm_v2.0_Chr4g0394701 Rosa chinensis HOM05D006656 ORTHO05D008208 2.8e-59 232.6 192 65.1
Hund11920 Selenicereus undatus HOM05D006656 ORTHO05D008208 3.7e-59 232.3 190 64.2
TPR.G25151 Trifolium pratense HOM05D006656 ORTHO05D008208 3.7e-59 232.3 190 65.3
HanXRQChr04g0115371 Helianthus annuus HOM05D006656 ORTHO05D008208 4.9e-59 231.9 204 61.8
Nitab4.5_0001425g0100 Nicotiana tabacum HOM05D006656 ORTHO05D008208 4.9e-59 231.9 197 63.5
Lalb_Chr03g0037311 Lupinus albus HOM05D006656 ORTHO05D008208 6.3e-59 231.5 200 63.5
Phvul.007G275000 Phaseolus vulgaris HOM05D006656 ORTHO05D008208 6.3e-59 231.5 190 65.3
Nn1g02903 Nelumbo nucifera HOM05D006656 ORTHO05D008208 1.1e-58 230.7 197 64.0
MD13G1218700 Malus domestica HOM05D006656 ORTHO05D008208 1.8e-58 229.9 191 64.4
MBI07_g22362_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 2.4e-58 229.6 195 63.1
Ca_12138_v3 Cicer arietinum L. HOM05D006656 ORTHO05D008208 3.1e-58 229.2 190 63.7
QL06p020043 Quercus lobata HOM05D006656 ORTHO05D008208 3.1e-58 229.2 194 63.4
ClCG05G004140 Citrullus lanatus HOM05D006656 ORTHO05D008208 5.4e-58 228.4 192 63.5
Manes.13G093430 Manihot esculenta HOM05D006656 ORTHO05D008208 5.4e-58 228.4 208 62.0
Potri.010G068200 Populus trichocarpa HOM05D006656 ORTHO05D008208 5.4e-58 228.4 183 66.1
DCAR_030758 Daucus carota HOM05D000730 ORTHO05D008208 7.0e-58 228.0 186 62.4
Sc25g0003620 Simmondsia chinensis HOM05D006656 ORTHO05D008208 7.0e-58 228.0 190 64.7
FAN12G3008 Fragaria x ananassa HOM05D006656 ORTHO05D008208 9.2e-58 227.6 192 63.5
PGR004G1080 Punica granatum HOM05D006656 ORTHO05D008208 9.2e-58 227.6 202 61.4
Cpa.g.sc44.21 Carica papaya HOM05D006656 ORTHO05D008208 1.6e-57 226.9 194 63.4
Actinidia39917 Actinidia chinensis HOM05D006656 ORTHO05D008208 2.0e-57 226.5 191 63.9
THA.LOC104804764 Tarenaya hassleriana HOM05D006656 ORTHO05D008208 2.0e-57 226.5 195 63.6
Hma1.2p1_0112F.1_g054500 Hydrangea macrophylla HOM05D006656 ORTHO05D008208 5.9e-57 224.9 193 63.2
Prupe.1G045500 Prunus persica HOM05D006656 ORTHO05D008208 7.7e-57 224.6 191 63.4
Sed0021014 Sechium edule HOM05D006656 ORTHO05D008208 1.0e-56 224.2 192 63.0
VMungo0720G2665 Vigna mungo HOM05D006656 ORTHO05D008208 1.0e-56 224.2 184 65.2
TWI09G0269 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 1.3e-56 223.8 191 63.4
TWI09G1522 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 1.3e-56 223.8 191 63.4
Rhsim02G0042500 Rhododendron simsii HOM05D006656 ORTHO05D008208 3.8e-56 222.2 192 63.5
CANSAT78G1635 Cannabis sativa HOM05D006656 ORTHO05D008208 8.6e-56 221.1 190 63.7
Aqoxy2G03715 Aquilegia oxysepala HOM05D006656 ORTHO05D008208 1.1e-55 220.7 192 60.9
CsaV3_3G011860 Cucumis sativus L. HOM05D006656 ORTHO05D008208 1.9e-55 219.9 197 59.9
HPP92_001387 Vanilla planifolia HOM05D006656 ORTHO05D008208 1.9e-55 219.9 189 63.0
ECA248G3216 Erigeron canadensis HOM05D006656 ORTHO05D008208 2.5e-55 219.5 196 61.2
MBI14_g30459_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 2.5e-55 219.5 195 61.0
arahy.Tifrunner.gnm1.ann1.DD5QG4 Arachis hypogaea HOM05D006656 ORTHO05D008208 3.3e-55 219.2 182 63.7
EL10Ac3g04969 Beta vulgaris HOM05D006656 ORTHO05D008208 3.3e-55 219.2 183 62.3
Ah.13g072350 Amaranthus hybridus HOM05D006656 ORTHO05D008208 9.5e-55 217.6 197 59.9
FAN17G2925 Fragaria x ananassa HOM05D006656 ORTHO05D008208 9.5e-55 217.6 182 64.8
Sabra10G0038900 Salix brachista HOM05D006656 ORTHO05D008208 1.2e-54 217.2 175 66.9
Lsat_1_v5_gn_1_75161 Lactuca sativa HOM05D006656 ORTHO05D008208 1.6e-54 216.9 190 60.5
BcaB06g26499 Brassica carinata HOM05D006656 ORTHO05D008208 3.6e-54 215.7 195 61.0
PSO447G0273 Papaver somniferum HOM05D006656 ORTHO05D008208 3.6e-54 215.7 191 59.7
Sp3g21170 Schrenkiella parvula HOM05D006656 ORTHO05D008208 3.6e-54 215.7 195 60.0
SpUn0047_0050 Schrenkiella parvula HOM05D006656 ORTHO05D008208 3.6e-54 215.7 195 60.0
arahy.Tifrunner.gnm1.ann1.C3VAXP Arachis hypogaea HOM05D006656 ORTHO05D008208 8.0e-54 214.5 184 62.0
CiPaw.01G180600 Carya illinoinensis HOM05D006656 ORTHO05D008208 8.0e-54 214.5 194 60.3
Atru.chr4.1959 Acer truncatum HOM05D006656 ORTHO05D008208 1.0e-53 214.2 185 61.6
AL3G38180 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 1.0e-53 214.2 192 59.9
AT3G23490 Arabidopsis thaliana HOM05D006656 ORTHO05D008208 1.0e-53 214.2 192 59.9
BcaC06g35534 Brassica carinata HOM05D006656 ORTHO05D008208 1.4e-53 213.8 195 60.5
BolC7t41871H Brassica oleracea HOM05D006656 ORTHO05D008208 1.4e-53 213.8 195 60.5
BraA07t28683Z Brassica rapa HOM05D006656 ORTHO05D008208 1.4e-53 213.8 195 60.5
AUR62002173 Chenopodium quinoa HOM05D006656 ORTHO05D008208 1.4e-53 213.8 186 62.4
PSO210G7176 Papaver somniferum HOM05D006656 ORTHO05D008208 1.4e-53 213.8 190 59.5
vmacro15465 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 1.4e-53 213.8 185 62.2
A07p08920 Brassica napus HOM05D006656 ORTHO05D008208 1.8e-53 213.4 195 60.0
C07p13760 Brassica napus HOM05D006656 ORTHO05D008208 1.8e-53 213.4 195 60.5
Os10g0471300 Oryza sativa ssp. japonica HOM05D006656 ORTHO05D008208 1.8e-53 213.4 202 56.4
Psat6g137160 Pisum sativum HOM05D006656 ORTHO05D008208 1.8e-53 213.4 184 60.3
MBI07_g15427_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 2.3e-53 213.0 200 58.0
Carub.0003s2372 Capsella rubella HOM05D006656 ORTHO05D008208 5.2e-53 211.8 192 59.9
CDE02G2281 Ceratophyllum demersum HOM05D006656 ORTHO05D008208 1.2e-52 210.7 186 61.3
Aa31LG8G9940 Aethionema arabicum HOM05D006656 ORTHO05D008208 2.0e-52 209.9 176 64.8
Thhalv10021585m.g Eutrema salsugineum HOM05D006656 ORTHO05D008208 2.0e-52 209.9 195 59.0
AUR62015536 Chenopodium quinoa HOM05D006656 ORTHO05D008208 2.6e-52 209.5 220 55.0
ATR0736G110 Amborella trichopoda HOM05D006656 ORTHO05D008208 1.3e-51 207.2 193 56.5
Lj3A676G52 Lonicera japonica HOM05D006656 ORTHO05D008208 3.7e-51 205.7 223 55.2
Zm00001eb046120 Zea mays HOM05D006656 ORTHO05D008208 8.3e-51 204.5 198 57.6
vmacro15466 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 1.9e-42 176.8 198 53.0
Cfa014756 Carpinus fangiana HOM05D006656 ORTHO05D008208 1.6e-41 173.7 110 80.0
Pp3c19_11440 Physcomitrium patens HOM05D006656 ORTHO05D008208 7.8e-41 171.4 196 47.4
Duzib151G0018 Durio zibethinus HOM05D006656 ORTHO05D008208 1.0e-40 171.0 120 72.5
Mapoly0080s0009 Marchantia polymorpha HOM05D006656 ORTHO05D008208 1.2e-38 164.1 194 45.9
Haze_11433 Corylus avellana HOM05D006656 ORTHO05D008208 1.4e-37 160.6 257 42.4
HPP92_000029 Vanilla planifolia HOM05D006656 ORTHO05D008208 1.4e-37 160.6 186 52.7
AL242U10020 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 1.8e-37 160.2 110 73.6
Cc03_g05940 Coffea canephora HOM05D006656 ORTHO05D008208 1.2e-36 157.5 129 63.6
GSVIVG01027874001 Vitis vinifera HOM05D006656 ORTHO05D008208 2.6e-36 156.4 131 62.6
AagrBONN_evm.TU.Sc2ySwM_344.2747 Anthoceros agrestis HOM05D006656 ORTHO05D008208 9.8e-36 154.5 197 44.2
MELO3C006399.2 Cucumis melo HOM05D000603 ORTHO05D003510 1.4e-34 150.6 184 47.3
CBR_g36666 Chara braunii HOM05D006656 ORTHO05D008208 6.8e-29 131.7 201 38.3
CBR_g71972 Chara braunii HOM05D006656 ORTHO05D008208 3.4e-28 129.4 198 40.4
PRCOL_00005673 Prasinoderma coloniale HOM05D006656 ORTHO05D008208 5.4e-26 122.1 190 38.4
arahy.Tifrunner.gnm1.ann1.USJ12Z Arachis hypogaea HOM05D006656 ORTHO05D008208 2.3e-24 116.7 82 72.0
Nitab4.5_0000014g0170 Nicotiana tabacum HOM05D006656 ORTHO05D008208 7.3e-23 111.7 74 74.3
SMO271G0046 Selaginella moellendorffii HOM05D006656 ORTHO05D008208 1.2e-20 104.4 176 34.7
BcaB02g10054 Brassica carinata HOM05D006656 ORTHO05D008208 9.6e-15 84.7 64 67.2
Gohir.A02G041301 Gossypium hirsutum HOM05D006656 ORTHO05D008208 1.8e-13 80.5 99 46.5
BcaB06g27105 Brassica carinata HOM05D006656 ORTHO05D008208 5.3e-13 79.0 43 81.4
BolC2t11169H Brassica oleracea HOM05D006656 ORTHO05D008208 6.9e-13 78.6 50 74.0
BcaC09g51699 Brassica carinata HOM05D006656 ORTHO05D008208 2.6e-12 76.6 45 77.8
AagrBONN_evm.TU.Sc2ySwM_344.2745 Anthoceros agrestis HOM05D006656 ORTHO05D008208 2.4e-10 70.1 112 36.6
C05p47480 Brassica napus HOM05D006656 ORTHO05D008208 9.3e-10 68.2 37 86.5
C03p47720 Brassica napus HOM05D006656 ORTHO05D008208 4.6e-09 65.9 37 83.8
HPP92_027915 Vanilla planifolia HOM05D003501 ORTHO05D004388 2.5e-07 60.1 64 57.8


User provided reference genes

Program Settings