Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 8.6e-76 287.0 151 100.0
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 6.0e-53 211.1 152 73.0
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 2.6e-48 195.7 152 69.7
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 6.0e-45 184.5 167 61.1
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 2.1e-42 176.0 158 64.6
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 3.7e-42 175.3 188 55.9
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 6.3e-42 174.5 158 64.6
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 3.1e-41 172.2 124 75.0
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 2.6e-40 169.1 158 63.9
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 2.6e-40 169.1 158 63.9
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 3.8e-39 165.2 145 64.8
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 6.5e-39 164.5 124 68.5
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 1.1e-38 163.7 157 63.1
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 1.4e-38 163.3 158 62.0
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 3.2e-38 162.2 129 67.4
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 4.2e-38 161.8 135 65.9
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 7.2e-38 161.0 152 60.5
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 9.3e-38 160.6 127 66.9
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 9.3e-38 160.6 141 66.0
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 9.3e-38 160.6 117 72.6
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 2.1e-37 159.5 155 59.4
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 2.7e-37 159.1 151 60.9
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 3.6e-37 158.7 145 62.1
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 4.6e-37 158.3 151 58.9
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 6.1e-37 157.9 121 68.6
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 1.3e-36 156.8 125 66.4
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 1.8e-36 156.4 129 67.4
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.8e-36 156.4 145 60.7
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 1.8e-36 156.4 151 60.3
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 2.3e-36 156.0 149 61.1
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 5.1e-36 154.8 126 67.5
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 5.1e-36 154.8 147 61.9
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 5.1e-36 154.8 121 68.6
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 5.1e-36 154.8 154 59.1
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 6.7e-36 154.5 115 67.0
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 6.7e-36 154.5 116 69.0
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 6.7e-36 154.5 125 68.8
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 8.7e-36 154.1 141 61.7
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.9e-35 152.9 146 58.9
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 1.9e-35 152.9 155 57.4
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 1.9e-35 152.9 141 61.0
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 2.5e-35 152.5 152 61.8
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 2.5e-35 152.5 152 59.9
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 4.3e-35 151.8 146 58.9
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 4.3e-35 151.8 117 69.2
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 4.3e-35 151.8 123 68.3
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 5.7e-35 151.4 142 62.0
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 5.7e-35 151.4 141 63.8
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 7.4e-35 151.0 146 61.0
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 9.7e-35 150.6 116 68.1
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 9.7e-35 150.6 116 69.0
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 1.3e-34 150.2 123 65.0
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 1.6e-34 149.8 141 61.0
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 1.6e-34 149.8 123 65.9
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 1.6e-34 149.8 159 57.9
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 2.8e-34 149.1 153 58.2
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 2.8e-34 149.1 147 56.5
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 3.7e-34 148.7 146 58.2
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 3.7e-34 148.7 151 57.6
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 4.8e-34 148.3 154 58.4
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 6.3e-34 147.9 134 61.9
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 6.3e-34 147.9 133 59.4
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 8.2e-34 147.5 153 56.9
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 8.2e-34 147.5 154 57.1
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 1.1e-33 147.1 123 64.2
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 1.1e-33 147.1 126 61.1
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 1.4e-33 146.7 128 62.5
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 1.4e-33 146.7 125 64.0
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 1.4e-33 146.7 128 62.5
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 1.4e-33 146.7 117 66.7
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 1.8e-33 146.4 142 59.9
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 1.8e-33 146.4 154 55.8
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 2.4e-33 146.0 118 65.3
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 2.4e-33 146.0 125 64.8
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 2.4e-33 146.0 123 63.4
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 2.4e-33 146.0 157 57.3
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 3.1e-33 145.6 154 56.5
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 4.1e-33 145.2 116 65.5
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 5.3e-33 144.8 118 66.9
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 6.9e-33 144.4 129 62.8
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 6.9e-33 144.4 121 65.3
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 9.1e-33 144.1 119 66.4
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 1.2e-32 143.7 129 62.0
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.2e-32 143.7 126 62.7
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 1.5e-32 143.3 129 62.0
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 1.5e-32 143.3 122 62.3
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 1.5e-32 143.3 128 62.5
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 2.0e-32 142.9 131 60.3
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 2.0e-32 142.9 128 61.7
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 4.5e-32 141.7 123 62.6
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 4.5e-32 141.7 153 55.6
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 5.9e-32 141.4 128 60.9
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 1.0e-31 140.6 146 54.1
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 1.7e-31 139.8 147 53.7
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 2.2e-31 139.4 116 65.5
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 3.8e-31 138.7 120 60.0
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 3.8e-31 138.7 147 54.4
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 5.0e-31 138.3 134 57.5
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 5.0e-31 138.3 147 53.7
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 8.5e-31 137.5 153 55.6
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 8.5e-31 137.5 153 55.6
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 1.1e-30 137.1 77 88.3
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 1.1e-30 137.1 123 57.7
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 1.1e-30 137.1 123 61.0
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 1.4e-30 136.7 119 58.0
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 1.9e-30 136.3 84 78.6
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 4.2e-30 135.2 147 52.4
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 2.1e-29 132.9 104 68.3
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 3.6e-29 132.1 124 58.9
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 3.9e-28 128.6 154 53.9
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 8.8e-28 127.5 110 60.0
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 2.0e-27 126.3 81 77.8
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 5.7e-27 124.8 78 78.2
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 1.3e-26 123.6 79 78.5
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 3.7e-26 122.1 130 50.8
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 3.1e-25 119.0 75 73.3
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 2.9e-23 112.5 122 53.3
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 1.6e-21 106.7 123 47.2
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 2.1e-21 106.3 122 50.8
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 2.7e-21 105.9 114 53.5
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 6.1e-21 104.8 112 49.1
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 3.9e-20 102.1 75 64.0
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 6.3e-18 94.7 79 58.2
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 1.4e-17 93.6 93 58.1
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 7.7e-16 87.8 92 53.3
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 8.5e-15 84.3 125 41.6
MSTRG.9877 Avicennia marina HOM05D006230 ORTHO05D007598 3.6e-13 79.0 74 56.8
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 5.0e-07 58.5 36 80.6
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 1.1e-06 57.4 66 43.9


User provided reference genes

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