Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 1.7e-257 892.1 430 100.0
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 4.5e-162 575.1 430 64.2
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 4.7e-151 538.5 417 62.1
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 7.0e-147 524.6 432 58.8
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 5.9e-146 521.5 427 59.7
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 5.6e-144 515.0 432 58.1
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 1.0e-142 510.8 426 57.5
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 1.4e-142 510.4 431 57.8
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 2.0e-141 506.5 425 59.3
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 4.4e-141 505.4 431 57.3
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 1.7e-140 503.4 433 57.0
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 2.2e-140 503.1 423 59.3
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 2.9e-140 502.7 431 57.1
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 3.7e-140 502.3 425 57.6
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 1.1e-139 500.7 432 56.7
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 1.1e-139 500.7 421 58.4
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 5.4e-139 498.4 445 55.3
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 5.4e-139 498.4 434 56.9
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 9.2e-139 497.7 421 56.1
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 6.0e-138 495.0 426 55.6
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 1.0e-137 494.2 432 55.8
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 3.0e-137 492.7 423 56.7
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 5.0e-137 491.9 422 56.4
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 1.9e-136 490.0 428 55.4
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 7.3e-136 488.0 428 54.2
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 9.5e-136 487.6 425 57.2
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 9.5e-136 487.6 425 57.2
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 2.8e-135 486.1 435 54.9
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 6.2e-135 485.0 431 54.8
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 8.0e-135 484.6 427 54.8
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 8.0e-135 484.6 431 54.8
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 1.1e-134 484.2 441 53.7
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 1.4e-134 483.8 419 53.2
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 1.5e-133 480.3 424 56.8
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 2.0e-133 479.9 419 56.6
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 2.6e-133 479.6 427 54.3
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 2.6e-133 479.6 420 54.8
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 3.4e-133 479.2 441 54.2
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 3.4e-133 479.2 419 57.5
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 5.8e-133 478.4 423 55.6
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 9.8e-133 477.6 425 54.8
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 1.7e-132 476.9 434 54.4
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 1.4e-131 473.8 353 63.5
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 2.4e-131 473.0 658 41.6
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 3.2e-131 472.6 433 53.8
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 4.1e-131 472.2 385 58.7
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 5.4e-131 471.9 425 55.5
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 1.2e-130 470.7 434 54.6
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 2.1e-130 469.9 428 54.7
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 4.6e-130 468.8 419 53.5
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 6.0e-130 468.4 424 54.2
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 5.1e-129 465.3 427 54.3
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 8.6e-129 464.5 421 53.2
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 1.5e-128 463.8 407 55.5
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 1.5e-128 463.8 410 55.4
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 2.5e-128 463.0 439 54.7
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 2.5e-128 463.0 436 53.9
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 7.3e-128 461.5 382 57.3
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 9.5e-128 461.1 421 54.2
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 3.6e-127 459.1 530 47.0
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 1.4e-126 457.2 376 59.0
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 8.9e-126 454.5 449 51.4
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 4.4e-125 452.2 421 52.3
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 1.7e-124 450.3 430 53.5
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.2e-124 449.9 421 52.0
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 8.3e-124 448.0 433 52.9
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 1.1e-123 447.6 430 51.9
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.4e-123 446.4 421 51.8
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 1.9e-120 436.8 430 50.9
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 1.6e-119 433.7 426 52.1
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 5.2e-118 428.7 418 52.6
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 6.8e-118 428.3 430 50.7
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 1.5e-117 427.2 369 56.4
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 2.0e-117 426.8 422 50.2
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 2.0e-117 426.8 422 51.4
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 7.6e-117 424.9 417 51.1
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 2.2e-116 423.3 422 52.6
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 3.8e-116 422.5 410 52.7
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 3.8e-116 422.5 421 51.8
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 3.2e-115 419.5 403 52.4
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 3.2e-115 419.5 403 52.4
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 4.6e-114 415.6 398 51.3
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 7.8e-114 414.8 424 49.3
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 1.7e-113 413.7 400 52.2
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 3.9e-113 412.5 395 52.7
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 5.1e-113 412.1 364 56.3
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 1.9e-112 410.2 424 49.8
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 1.9e-112 410.2 354 54.8
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 9.6e-112 407.9 405 50.4
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 3.6e-111 406.0 429 48.7
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 8.1e-111 404.8 442 48.2
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 2.9e-108 396.4 359 53.5
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 1.5e-93 347.4 432 41.7
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 5.5e-91 339.0 302 54.0
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 7.1e-91 338.6 310 56.8
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 6.1e-74 282.3 482 37.1
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.0e-69 267.3 303 47.9
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 3.0e-65 253.4 456 36.2
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 1.7e-60 237.7 273 46.9
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.1e-59 235.0 246 51.6
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 1.1e-59 235.0 208 55.8
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 1.9e-59 234.2 186 58.1
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 1.9e-51 207.6 184 57.1
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 7.2e-51 205.7 209 47.8
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 1.8e-41 174.5 296 38.9
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 1.2e-40 171.8 180 47.8
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 4.5e-37 159.8 135 54.1
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 6.3e-31 139.4 124 52.4
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 1.1e-30 138.7 114 57.0
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 2.4e-22 110.9 101 54.5
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 4.9e-15 86.7 102 41.2
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 3.9e-12 77.0 101 38.6
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 1.8e-09 68.2 220 26.8
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 2.0e-08 64.7 100 43.0
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 2.2e-07 61.2 51 56.9
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 5.4e-06 56.6 59 49.2


User provided reference genes

Program Settings