Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold67G22685 Striga asiatica HOM05D008157 ORTHO05D009575 7.0e-84 313.9 159 100.0
SalBow2G3016 Salvia bowleyana HOM05D008157 ORTHO05D009575 1.9e-36 156.4 169 57.4
MSTRG.4173 Avicennia marina HOM05D008157 ORTHO05D009575 3.3e-25 119.0 106 62.3
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 1.6e-19 100.1 150 43.3
Migut.G00556 Erythranthe guttata HOM05D008157 ORTHO05D009575 1.0e-18 97.4 105 56.2
Peaxi162Scf00153g01844 Petunia axillaris HOM05D008157 ORTHO05D009575 9.6e-17 90.9 144 41.7
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 2.1e-16 89.7 163 38.7
Cc03_g06320 Coffea canephora HOM05D008157 ORTHO05D009575 8.1e-16 87.8 146 38.4
Cc09_g08530 Coffea canephora HOM05D008157 ORTHO05D009575 8.1e-16 87.8 146 38.4
CSS0033147 Camellia sinensis var. sinensis HOM05D008157 ORTHO05D009575 1.1e-15 87.4 141 39.0
DCAR_030762 Daucus carota HOM05D008157 ORTHO05D009575 1.1e-15 87.4 106 50.0
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 7.6e-14 81.3 116 40.5
Nitab4.5_0007351g0030 Nicotiana tabacum HOM05D008157 ORTHO05D009575 2.9e-13 79.3 129 41.9
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 3.8e-13 79.0 165 34.5
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 7.1e-12 74.7 154 35.7
Nitab4.5_0000194g0190 Nicotiana tabacum HOM05D008157 ORTHO05D009575 9.3e-12 74.3 131 39.7
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 9.3e-12 74.3 121 38.8
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 2.1e-11 73.2 164 31.7
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 2.7e-11 72.8 150 36.0
Atru.chr4.1914 Acer truncatum HOM05D008157 ORTHO05D009575 3.5e-11 72.4 113 42.5
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 3.5e-11 72.4 139 37.4
Lj5g0023776 Lotus japonicus HOM05D012468 ORTHO05D009575 4.6e-11 72.0 127 37.8
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 2.3e-10 69.7 93 40.9
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 3.0e-10 69.3 93 40.9
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 6.6e-10 68.2 137 33.6
VMungo0720G2187 Vigna mungo HOM05D012468 ORTHO05D009575 6.6e-10 68.2 123 40.7
MELO3C006376.2 Cucumis melo HOM05D008157 ORTHO05D009575 8.7e-10 67.8 117 38.5
Sabra10G0041500 Salix brachista HOM05D008157 ORTHO05D009575 1.1e-09 67.4 116 34.5
Sed0015987 Sechium edule HOM05D008157 ORTHO05D009575 1.1e-09 67.4 113 40.7
Duzib151G0689 Durio zibethinus HOM05D008157 ORTHO05D009575 1.9e-09 66.6 126 34.1
EL10Ac3g06669 Beta vulgaris HOM05D008157 ORTHO05D009575 4.3e-09 65.5 114 40.4
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 4.3e-09 65.5 126 39.7
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 4.3e-09 65.5 164 33.5
CsaV3_3G011680 Cucumis sativus L. HOM05D008157 ORTHO05D009575 5.6e-09 65.1 122 35.2
MD16G1226400 Malus domestica HOM05D008157 ORTHO05D009575 5.6e-09 65.1 90 40.0
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 7.3e-09 64.7 163 33.1
VMungo1215G2213 Vigna mungo HOM05D012468 ORTHO05D009575 7.3e-09 64.7 122 37.7
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 9.6e-09 64.3 157 33.8
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 9.6e-09 64.3 86 47.7
Phvul.011G133515 Phaseolus vulgaris HOM05D012468 ORTHO05D009575 9.6e-09 64.3 128 35.2
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 1.6e-08 63.5 126 33.3
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 1.6e-08 63.5 124 34.7
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 2.8e-08 62.8 101 40.6
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 4.8e-08 62.0 101 40.6
Hma1.2p1_0112F.1_g054760 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 4.8e-08 62.0 98 41.8
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 6.2e-08 61.6 122 33.6
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 6.2e-08 61.6 131 35.9
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 1.4e-07 60.5 91 39.6
Nitab4.5_0000194g0130 Nicotiana tabacum HOM05D008157 ORTHO05D009575 1.8e-07 60.1 85 43.5
Glyma.20G200000 Glycine max HOM05D012468 ORTHO05D009575 4.0e-07 58.9 127 35.4
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 6.9e-07 58.2 80 37.5
Solyc09g090710.3 Solanum lycopersicum HOM05D008157 ORTHO05D009575 2.0e-06 56.6 85 37.6
PSO832G3861 Papaver somniferum HOM05D008157 ORTHO05D009575 2.6e-06 56.2 106 42.5
Duzib138G0893 Durio zibethinus HOM05D014916 ORTHO05D009575 5.8e-06 55.1 103 32.0
RcHm_v2.0_Chr4g0395401 Rosa chinensis HOM05D008157 ORTHO05D009575 5.8e-06 55.1 71 40.8
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 5.8e-06 55.1 120 36.7


User provided reference genes

Program Settings