Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold67G22648 Striga asiatica HOM05D001703 ORTHO05D005708 1.0e-60 236.5 114 100.0
ATR0564G237 Amborella trichopoda HOM05D001703 ORTHO05D005708 9.9e-16 87.0 93 51.6
Nn6g33913 Nelumbo nucifera HOM05D001703 ORTHO05D005708 9.9e-16 87.0 93 52.7
Hma1.2p1_1040F.1_g250930 Hydrangea macrophylla HOM05D001703 ORTHO05D005708 2.9e-15 85.5 93 51.6
Hma1.2p1_1098F.1_g256720 Hydrangea macrophylla HOM05D001703 ORTHO05D005708 2.9e-15 85.5 93 51.6
PSO063G3743 Papaver somniferum HOM05D001703 ORTHO05D005708 2.9e-15 85.5 93 51.6
PSO782G2754 Papaver somniferum HOM05D001703 ORTHO05D005708 2.9e-15 85.5 93 51.6
unitig_0.g1321 Utricularia gibba HOM05D001703 ORTHO05D005708 3.8e-15 85.1 93 53.8
Actinidia12665 Actinidia chinensis HOM05D001703 ORTHO05D005708 4.9e-15 84.7 93 50.5
Oeu063215.2 Olea europaea HOM05D001703 ORTHO05D005708 4.9e-15 84.7 93 51.6
Lalb_Chr01g0021531 Lupinus albus HOM05D001703 ORTHO05D005708 6.4e-15 84.3 93 51.6
TAR375G0518 Trochodendron aralioides HOM05D001703 ORTHO05D005708 8.4e-15 84.0 93 50.5
CAN.G899.24 Capsicum annuum HOM05D001703 ORTHO05D005708 1.1e-14 83.6 93 50.5
Lj9C561G12 Lonicera japonica HOM05D001703 ORTHO05D005708 1.1e-14 83.6 93 50.5
Sabra01G0095200 Salix brachista HOM05D001703 ORTHO05D005708 1.1e-14 83.6 93 52.7
Solyc01g090690.4 Solanum lycopersicum HOM05D001703 ORTHO05D005708 1.1e-14 83.6 93 50.5
Sopen01g036420 Solanum pennellii HOM05D001703 ORTHO05D005708 1.1e-14 83.6 93 50.5
PGSC0003DMG400026030 Solanum tuberosum HOM05D001703 ORTHO05D005708 1.1e-14 83.6 93 50.5
TWI59G0672 Tripterygium wilfordii HOM05D001703 ORTHO05D005708 1.1e-14 83.6 93 49.5
Actinidia33491 Actinidia chinensis HOM05D001703 ORTHO05D005708 1.4e-14 83.2 93 49.5
Cc02_g24480 Coffea canephora HOM05D001703 ORTHO05D005708 1.4e-14 83.2 93 50.5
Oeu061508.1 Olea europaea HOM05D001703 ORTHO05D005708 1.4e-14 83.2 93 50.5
Potri.003G109900 Populus trichocarpa HOM05D001703 ORTHO05D005708 1.4e-14 83.2 93 51.6
Rhsim02G0217200 Rhododendron simsii HOM05D001703 ORTHO05D005708 1.4e-14 83.2 93 50.5
SalBow5G4945 Salvia bowleyana HOM05D001703 ORTHO05D005708 1.4e-14 83.2 93 50.5
Duzib133G0844 Durio zibethinus HOM05D001703 ORTHO05D005708 1.9e-14 82.8 93 50.5
Potri.001G123600 Populus trichocarpa HOM05D001703 ORTHO05D005708 1.9e-14 82.8 93 50.5
Aqoxy5G03848 Aquilegia oxysepala HOM05D001703 ORTHO05D005708 2.4e-14 82.4 93 50.5
Ciclev10018974m.g Citrus clementina HOM05D001703 ORTHO05D005708 2.4e-14 82.4 93 49.5
Dinv44101 Davidia involucrata HOM05D001703 ORTHO05D005708 2.4e-14 82.4 93 50.5
Migut.B01569 Erythranthe guttata HOM05D001703 ORTHO05D005708 2.4e-14 82.4 93 50.5
Peaxi162Scf00377g00725 Petunia axillaris HOM05D001703 ORTHO05D005708 2.4e-14 82.4 93 50.5
CSS0006474 Camellia sinensis var. sinensis HOM05D001703 ORTHO05D005708 3.2e-14 82.0 93 49.5
CSS0031871 Camellia sinensis var. sinensis HOM05D001703 ORTHO05D005708 3.2e-14 82.0 93 49.5
AT1G45332 Arabidopsis thaliana HOM05D001703 ORTHO05D005708 4.2e-14 81.6 93 51.6
AT2G45030 Arabidopsis thaliana HOM05D001703 ORTHO05D005708 4.2e-14 81.6 93 51.6
CDE08G1227 Ceratophyllum demersum HOM05D001703 ORTHO05D005708 4.2e-14 81.6 93 48.4
Ca_07392_v3 Cicer arietinum L. HOM05D001703 ORTHO05D005708 4.2e-14 81.6 93 50.5
Sp4g27090 Schrenkiella parvula HOM05D001703 ORTHO05D005708 4.2e-14 81.6 93 51.6
Thecc.01G387100 Theobroma cacao HOM05D001703 ORTHO05D005708 4.2e-14 81.6 93 50.5
arahy.Tifrunner.gnm1.ann1.FL2079 Arachis hypogaea HOM05D001703 ORTHO05D005708 5.4e-14 81.3 93 50.5
DCAR_031877 Daucus carota HOM05D001703 ORTHO05D005708 5.4e-14 81.3 93 47.3
Phvul.008G157300 Phaseolus vulgaris HOM05D001703 ORTHO05D005708 5.4e-14 81.3 93 49.5
TWI14G0062 Tripterygium wilfordii HOM05D001703 ORTHO05D005708 5.4e-14 81.3 93 49.5
vmacro13467 Vaccinium macrocarpon HOM05D001703 ORTHO05D005708 5.4e-14 81.3 93 48.4
GSVIVG01018186001 Vitis vinifera HOM05D001703 ORTHO05D005708 5.4e-14 81.3 93 48.4
AL4G44120 Arabidopsis lyrata HOM05D001703 ORTHO05D005708 7.1e-14 80.9 93 50.5
Carub.0004s2762 Capsella rubella HOM05D001703 ORTHO05D005708 7.1e-14 80.9 93 50.5
CARHR140280 Cardamine hirsuta HOM05D001703 ORTHO05D005708 7.1e-14 80.9 93 50.5
Hund12552 Selenicereus undatus HOM05D001703 ORTHO05D005708 7.1e-14 80.9 93 50.5
Eucgr.D02509 Eucalyptus grandis HOM05D001703 ORTHO05D005708 9.3e-14 80.5 93 49.5
Duzib138G1530 Durio zibethinus HOM05D001703 ORTHO05D005708 1.2e-13 80.1 93 49.5
Thhalv10001325m.g Eutrema salsugineum HOM05D001703 ORTHO05D005708 1.2e-13 80.1 93 50.5
Gohir.A11G077500 Gossypium hirsutum HOM05D001703 ORTHO05D005708 1.2e-13 80.1 93 49.5
Gorai.007G087600 Gossypium raimondii HOM05D001703 ORTHO05D005708 1.2e-13 80.1 93 49.5
MD07G1111000 Malus domestica HOM05D001703 ORTHO05D005708 1.2e-13 80.1 93 48.4
PGR004G2547 Punica granatum HOM05D001703 ORTHO05D005708 1.2e-13 80.1 93 49.5
Cpa.g.sc218.3 Carica papaya HOM05D001703 ORTHO05D005708 1.6e-13 79.7 93 49.5
COL.COLO4_12454 Corchorus olitorius HOM05D001703 ORTHO05D005708 1.6e-13 79.7 93 49.5
Haze_02737 Corylus avellana HOM05D001703 ORTHO05D005708 1.6e-13 79.7 93 49.5
Gohir.A07G147800 Gossypium hirsutum HOM05D001703 ORTHO05D005708 1.6e-13 79.7 93 48.4
Gohir.D07G154000 Gossypium hirsutum HOM05D001703 ORTHO05D005708 1.6e-13 79.7 93 48.4
Gohir.D11G081900 Gossypium hirsutum HOM05D001703 ORTHO05D005708 1.6e-13 79.7 93 48.4
Gorai.001G176200 Gossypium raimondii HOM05D001703 ORTHO05D005708 1.6e-13 79.7 93 48.4
Lalb_Chr03g0039991 Lupinus albus HOM05D001703 ORTHO05D005708 1.6e-13 79.7 93 49.5
Aa31LG1G26610 Aethionema arabicum HOM05D001703 ORTHO05D005708 2.1e-13 79.3 93 48.4
Cfa011126 Carpinus fangiana HOM05D001703 ORTHO05D005708 2.1e-13 79.3 93 48.4
Glyma.01G075400 Glycine max HOM05D001703 ORTHO05D005708 2.1e-13 79.3 93 48.4
Lj1g0021366 Lotus japonicus HOM05D001703 ORTHO05D005708 2.1e-13 79.3 93 49.5
Sc12g0008260 Simmondsia chinensis HOM05D001703 ORTHO05D005708 2.1e-13 79.3 93 48.4
VMungo1383G1201 Vigna mungo HOM05D001703 ORTHO05D005708 2.1e-13 79.3 93 48.4
CiPaw.13G030200 Carya illinoinensis HOM05D001703 ORTHO05D005708 2.7e-13 79.0 93 49.5
QL04p035341 Quercus lobata HOM05D001703 ORTHO05D005708 2.7e-13 79.0 93 49.5
THA.LOC104827585 Tarenaya hassleriana HOM05D001703 ORTHO05D005708 2.7e-13 79.0 93 49.5
Atru.chr5.204 Acer truncatum HOM05D001703 ORTHO05D005708 3.5e-13 78.6 93 48.4
Ah.05g167390 Amaranthus hybridus HOM05D001703 ORTHO05D005708 3.5e-13 78.6 93 48.4
EL10Ac8g19417 Beta vulgaris HOM05D001703 ORTHO05D005708 4.6e-13 78.2 93 48.4
BcaC02g12268 Brassica carinata HOM05D001703 ORTHO05D005708 4.6e-13 78.2 92 48.9
A05p05120 Brassica napus HOM05D001703 ORTHO05D005708 4.6e-13 78.2 92 48.9
C04p05970 Brassica napus HOM05D001703 ORTHO05D005708 4.6e-13 78.2 92 48.9
BolC4t22228H Brassica oleracea HOM05D001703 ORTHO05D005708 4.6e-13 78.2 92 48.9
BraA05t19486Z Brassica rapa HOM05D001703 ORTHO05D005708 4.6e-13 78.2 92 48.9
AUR62034061 Chenopodium quinoa HOM05D001703 ORTHO05D005708 4.6e-13 78.2 93 48.4
MELO3C022276.2 Cucumis melo HOM05D001703 ORTHO05D005708 4.6e-13 78.2 93 47.3
CsaV3_6G008600 Cucumis sativus L. HOM05D001703 ORTHO05D005708 4.6e-13 78.2 93 47.3
FvH4_7g10500 Fragaria vesca HOM05D001703 ORTHO05D005708 4.6e-13 78.2 95 46.3
FAN06G1838 Fragaria x ananassa HOM05D001703 ORTHO05D005708 4.6e-13 78.2 95 46.3
FAN06G3291 Fragaria x ananassa HOM05D001703 ORTHO05D005708 4.6e-13 78.2 95 46.3
FAN10G2068 Fragaria x ananassa HOM05D001703 ORTHO05D005708 4.6e-13 78.2 95 46.3
FAN10G3449 Fragaria x ananassa HOM05D001703 ORTHO05D005708 4.6e-13 78.2 95 46.3
MBI07_g35164_MAGBIO Magnolia biondii HOM05D001703 ORTHO05D005708 4.6e-13 78.2 93 47.3
Prupe.2G134500 Prunus persica HOM05D001703 ORTHO05D005708 4.6e-13 78.2 93 47.3
RcHm_v2.0_Chr1g0348291 Rosa chinensis HOM05D001703 ORTHO05D005708 4.6e-13 78.2 95 46.3
Nitab4.5_0001823g0080 Nicotiana tabacum HOM05D001703 ORTHO05D005708 7.9e-13 77.4 105 46.7
SEGI_18917 Sequoiadendron giganteum HOM05D001703 ORTHO05D005708 7.9e-13 77.4 93 46.2
AagrBONN_evm.TU.Sc2ySwM_340.168 Anthoceros agrestis HOM05D001703 ORTHO05D005708 1.0e-12 77.0 93 46.2
Glyma.11G163201 Glycine max HOM05D001703 ORTHO05D005708 1.3e-12 76.6 92 47.8
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 3.0e-12 75.5 93 44.1
Os03g0565500 Oryza sativa ssp. japonica HOM05D001703 ORTHO05D005708 3.0e-12 75.5 93 45.2
Rhsim02G0217000 Rhododendron simsii HOM05D001703 ORTHO05D005708 3.0e-12 75.5 48 75.0
Zm00001eb064310 Zea mays HOM05D001703 ORTHO05D005708 3.0e-12 75.5 93 44.1
ClCG06G002530 Citrullus lanatus HOM05D001703 ORTHO05D005708 3.9e-12 75.1 93 45.2
Manes.13G145400 Manihot esculenta HOM05D001703 ORTHO05D005708 3.9e-12 75.1 93 45.2
FAN01G2709 Fragaria x ananassa HOM05D001703 ORTHO05D005708 5.1e-12 74.7 95 45.3
Medtr7g044770 Medicago truncatula HOM05D001703 ORTHO05D005708 5.1e-12 74.7 93 46.2
Sed0002552 Sechium edule HOM05D001703 ORTHO05D005708 5.1e-12 74.7 93 44.1
Mapoly0029s0132 Marchantia polymorpha HOM05D001703 ORTHO05D005708 6.7e-12 74.3 93 47.3
ECA236G3770 Erigeron canadensis HOM05D001703 ORTHO05D005708 1.5e-11 73.2 93 44.1
Pp3c19_15980 Physcomitrium patens HOM05D001703 ORTHO05D005708 1.5e-11 73.2 93 46.2
HPP92_020903 Vanilla planifolia HOM05D001703 ORTHO05D005708 1.5e-11 73.2 48 72.9
arahy.Tifrunner.gnm1.ann1.57CUP1 Arachis hypogaea HOM05D001703 ORTHO05D005708 1.9e-11 72.8 58 63.8
SMO361G0314 Selaginella moellendorffii HOM05D001703 ORTHO05D005708 1.9e-11 72.8 93 43.0
Pp3c22_17180 Physcomitrium patens HOM05D001703 ORTHO05D005708 2.5e-11 72.4 93 44.1
Psat3g157880 Pisum sativum HOM05D001703 ORTHO05D005708 5.6e-11 71.2 93 41.9
arahy.Tifrunner.gnm1.ann1.D1YXCG Arachis hypogaea HOM05D001703 ORTHO05D005708 7.4e-11 70.9 48 70.8
arahy.Tifrunner.gnm1.ann1.D5QJZZ Arachis hypogaea HOM05D001703 ORTHO05D005708 7.4e-11 70.9 48 70.8
arahy.Tifrunner.gnm1.ann1.XEJ3YL Arachis hypogaea HOM05D001703 ORTHO05D005708 7.4e-11 70.9 48 70.8
HanXRQChr04g0123481 Helianthus annuus HOM05D001703 ORTHO05D005708 7.4e-11 70.9 93 44.1
Medtr2g020660 Medicago truncatula HOM05D001703 ORTHO05D005708 7.4e-11 70.9 93 43.0
QL11p052913 Quercus lobata HOM05D001703 ORTHO05D005708 7.4e-11 70.9 48 68.8
TPR.G18025 Trifolium pratense HOM05D001703 ORTHO05D005708 7.4e-11 70.9 93 44.1
TPR.G39063 Trifolium pratense HOM05D001703 ORTHO05D005708 9.6e-11 70.5 93 44.1
QL06p030935 Quercus lobata HOM05D001703 ORTHO05D005708 4.8e-10 68.2 47 68.1
MCO11G478 Micromonas commoda HOM05D001703 ORTHO05D005708 3.1e-09 65.5 93 41.9
Nitab4.5_0003110g0050 Nicotiana tabacum HOM05D001703 ORTHO05D005708 3.1e-09 65.5 60 58.3
Psat3g052960 Pisum sativum HOM05D001703 ORTHO05D005708 6.9e-09 64.3 93 40.9
Sabra03G0076100 Salix brachista HOM05D001703 ORTHO05D005708 6.9e-09 64.3 75 50.7


User provided reference genes

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