Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold677G53440 Striga asiatica HOM05D000167 ORTHO05D403344 2.3e-76 288.9 151 100.0
SGA_v2.0_scaffold89G27574 Striga asiatica HOM05D000167 ORTHO05D000994 4.0e-12 75.5 220 30.5
MSTRG.21810 Avicennia marina HOM05D000167 ORTHO05D000994 3.3e-11 72.4 106 39.6
SalBow5G3178 Salvia bowleyana HOM05D000167 ORTHO05D000994 3.3e-11 72.4 102 45.1
SalBow2G1185 Salvia bowleyana HOM05D000167 ORTHO05D000994 4.4e-11 72.0 99 40.4
Oeu029267.4 Olea europaea HOM05D000167 ORTHO05D000994 2.8e-10 69.3 61 50.8
SalBow5G3923 Salvia bowleyana HOM05D000167 ORTHO05D000994 3.7e-10 68.9 93 39.8
SalBow5G2442 Salvia bowleyana HOM05D000167 ORTHO05D000994 8.2e-10 67.8 93 39.8
SalBow5G5419 Salvia bowleyana HOM05D000167 ORTHO05D000994 1.8e-09 66.6 104 42.3
Migut.N00116 Erythranthe guttata HOM05D000167 ORTHO05D000994 2.4e-09 66.2 92 41.3
Migut.G00202 Erythranthe guttata HOM05D000167 ORTHO05D000994 5.3e-09 65.1 56 51.8
SalBow2G0218 Salvia bowleyana HOM05D000167 ORTHO05D000994 7.0e-09 64.7 92 41.3
SalBow2G2754 Salvia bowleyana HOM05D000167 ORTHO05D000994 7.0e-09 64.7 92 39.1
MSTRG.10061 Avicennia marina HOM05D000167 ORTHO05D000994 9.1e-09 64.3 101 33.7
SGA_v2.0_scaffold57G20207 Striga asiatica HOM05D000167 ORTHO05D000994 1.2e-08 63.9 57 52.6
Migut.G00201 Erythranthe guttata HOM05D000167 ORTHO05D000994 1.6e-08 63.5 101 40.6
MSTRG.10063 Avicennia marina HOM05D000167 ORTHO05D000994 2.7e-08 62.8 129 36.4
MSTRG.3947 Avicennia marina HOM05D000167 ORTHO05D000994 3.5e-08 62.4 98 38.8
Cc11_g06140 Coffea canephora HOM05D000167 ORTHO05D000994 5.9e-08 61.6 109 37.6
Hma1.2p1_1273F.1_g271910 Hydrangea macrophylla HOM05D000167 ORTHO05D000994 7.7e-08 61.2 131 35.1
SalBow3G4172 Salvia bowleyana HOM05D000167 ORTHO05D000994 1.0e-07 60.8 141 31.2
Oeu030497.1 Olea europaea HOM05D000167 ORTHO05D000994 2.2e-07 59.7 142 33.1
Dinv20816 Davidia involucrata HOM05D000167 ORTHO05D000994 2.9e-07 59.3 125 34.4
SalBow5G5702 Salvia bowleyana HOM05D000167 ORTHO05D000994 3.8e-07 58.9 51 56.9
Migut.G00200 Erythranthe guttata HOM05D000167 ORTHO05D000994 6.5e-07 58.2 95 38.9
Gohir.A01G130500 Gossypium hirsutum HOM05D000167 ORTHO05D000994 6.5e-07 58.2 48 54.2
PGSC0003DMG400017249 Solanum tuberosum HOM05D000167 ORTHO05D000994 8.5e-07 57.8 59 47.5
PGSC0003DMG400017191 Solanum tuberosum HOM05D000167 ORTHO05D000994 1.1e-06 57.4 97 37.1
TAR369G0093 Trochodendron aralioides HOM05D000167 ORTHO05D000994 1.1e-06 57.4 83 38.6
TAR623G1085 Trochodendron aralioides HOM05D000167 ORTHO05D000994 1.1e-06 57.4 41 58.5
TWI15G0823 Tripterygium wilfordii HOM05D000167 ORTHO05D000994 1.5e-06 57.0 70 40.0
Gohir.D01G119400 Gossypium hirsutum HOM05D000167 ORTHO05D000994 1.9e-06 56.6 54 48.1
Gorai.002G145800 Gossypium raimondii HOM05D000167 ORTHO05D000994 1.9e-06 56.6 54 48.1
Lj2C28T1 Lonicera japonica HOM05D000167 ORTHO05D000994 1.9e-06 56.6 118 36.4
Nitab4.5_0002318g0030 Nicotiana tabacum HOM05D000167 ORTHO05D000994 1.9e-06 56.6 87 40.2
Oeu029273.1 Olea europaea HOM05D000167 ORTHO05D000994 1.9e-06 56.6 58 48.3
Lj2C28T0 Lonicera japonica HOM05D000167 ORTHO05D000994 2.5e-06 56.2 114 37.7
Cc02_g10030 Coffea canephora HOM05D000167 ORTHO05D000994 3.2e-06 55.8 102 37.3
Dinv20815 Davidia involucrata HOM05D000167 ORTHO05D000994 3.2e-06 55.8 133 31.6
COL.COLO4_20116 Corchorus olitorius HOM05D000167 ORTHO05D000994 4.2e-06 55.5 38 65.8
Eucgr.B03886 Eucalyptus grandis HOM05D000167 ORTHO05D000994 4.2e-06 55.5 81 42.0
Lj2A29T78 Lonicera japonica HOM05D000167 ORTHO05D000994 4.2e-06 55.5 50 46.0
Hma1.2p1_0761F.1_g214300 Hydrangea macrophylla HOM05D000167 ORTHO05D000994 5.5e-06 55.1 73 43.8
Nitab4.5_0010633g0030 Nicotiana tabacum HOM05D000167 ORTHO05D000994 5.5e-06 55.1 133 30.1
Gohir.A10G235500 Gossypium hirsutum HOM05D000167 ORTHO05D000994 7.2e-06 54.7 48 54.2
Gohir.D10G247900 Gossypium hirsutum HOM05D000167 ORTHO05D000994 7.2e-06 54.7 48 54.2
Rhsim03G0105100 Rhododendron simsii HOM05D000167 ORTHO05D000994 7.2e-06 54.7 55 49.1
Rhsim03G0105300 Rhododendron simsii HOM05D000167 ORTHO05D000994 7.2e-06 54.7 110 37.3
SalBow2G0021 Salvia bowleyana HOM05D000167 ORTHO05D000994 7.2e-06 54.7 107 35.5
Migut.N00117 Erythranthe guttata HOM05D000167 ORTHO05D000994 9.4e-06 54.3 95 33.7
Nitab4.5_0001016g0020 Nicotiana tabacum HOM05D000167 ORTHO05D000994 9.4e-06 54.3 120 37.5
Oeu061772.2 Olea europaea HOM05D000167 ORTHO05D000994 9.4e-06 54.3 97 35.1


User provided reference genes

Program Settings