Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold671G53422 Striga asiatica HOM05D006221 ORTHO05D007759 0.0e+00 1300.4 653 100.0
MSTRG.16421 Avicennia marina HOM05D006221 ORTHO05D007759 2.3e-250 869.0 660 70.5
Migut.B00875 Erythranthe guttata HOM05D006221 ORTHO05D007759 2.2e-248 862.4 665 69.3
Oeu016545.1 Olea europaea HOM05D006221 ORTHO05D007759 4.2e-228 795.0 657 64.7
SalBow5G5479 Salvia bowleyana HOM05D006221 ORTHO05D007759 5.5e-228 794.7 697 62.8
Solyc01g101110.3 Solanum lycopersicum HOM05D006221 ORTHO05D007759 9.5e-212 740.7 671 61.0
Sopen01g044560 Solanum pennellii HOM05D006221 ORTHO05D007759 9.5e-212 740.7 672 60.9
Dinv30939 Davidia involucrata HOM05D006221 ORTHO05D007759 1.6e-211 740.0 661 61.0
Actinidia11678 Actinidia chinensis HOM05D006221 ORTHO05D007759 5.4e-207 724.9 660 60.3
Hma1.2p1_0052F.1_g030430 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 5.4e-207 724.9 666 59.8
GSVIVG01031316001 Vitis vinifera HOM05D006221 ORTHO05D007759 7.8e-206 721.1 650 59.8
Cc02_g35760 Coffea canephora HOM05D006221 ORTHO05D007759 5.0e-205 718.4 683 59.7
Lju99A6T47 Lonicera japonica HOM05D006221 ORTHO05D007759 1.4e-199 700.3 671 59.0
vmacro01605 Vaccinium macrocarpon HOM05D006221 ORTHO05D007759 9.2e-199 697.6 684 57.6
Haze_03998 Corylus avellana HOM05D006221 ORTHO05D007759 1.0e-197 694.1 683 56.7
QL03p010449 Quercus lobata HOM05D006221 ORTHO05D007759 4.3e-196 688.7 664 56.5
Manes.09G180400 Manihot esculenta HOM05D006221 ORTHO05D007759 1.4e-191 673.7 665 55.8
Rhsim11G0101500 Rhododendron simsii HOM05D006221 ORTHO05D007759 1.0e-189 667.5 775 50.8
Eucgr.B01816 Eucalyptus grandis HOM05D006221 ORTHO05D007759 1.1e-186 657.5 653 55.6
CiPaw.07G035200 Carya illinoinensis HOM05D006221 ORTHO05D007759 1.8e-186 656.8 605 59.2
Nitab4.5_0014566g0010 Nicotiana tabacum HOM05D006221 ORTHO05D007759 4.9e-184 648.7 656 56.6
Potri.005G003400 Populus trichocarpa HOM05D006221 ORTHO05D007759 6.4e-184 648.3 625 56.5
Lj1g0008157 Lotus japonicus HOM05D006221 ORTHO05D007759 1.1e-183 647.5 668 56.0
Atru.chr12.1555 Acer truncatum HOM05D006221 ORTHO05D007759 5.4e-183 645.2 662 54.5
Sabra05G0000700 Salix brachista HOM05D006221 ORTHO05D007759 2.7e-182 642.9 620 56.6
Ciclev10011303m.g Citrus clementina HOM05D006221 ORTHO05D007759 7.8e-182 641.3 672 53.0
PGR083G2161 Punica granatum HOM05D006221 ORTHO05D007759 7.8e-182 641.3 660 53.0
Sabra05G0014800 Salix brachista HOM05D006221 ORTHO05D007759 7.8e-182 641.3 620 56.5
CAN.G1248.26 Capsicum annuum HOM05D006221 ORTHO05D007759 1.0e-181 641.0 697 54.1
Thecc.05G328800 Theobroma cacao HOM05D006221 ORTHO05D007759 1.7e-181 640.2 651 55.0
Peaxi162Scf00357g00116 Petunia axillaris HOM05D006221 ORTHO05D007759 2.3e-181 639.8 675 54.5
ClCG03G017850 Citrullus lanatus HOM05D006221 ORTHO05D007759 1.1e-180 637.5 672 53.7
CANSAT54G2840 Cannabis sativa HOM05D006221 ORTHO05D007759 3.3e-180 636.0 596 57.2
Lalb_Chr18g0046191 Lupinus albus HOM05D006221 ORTHO05D007759 2.1e-179 633.3 660 53.8
Glyma.19G226000 Glycine max HOM05D006221 ORTHO05D007759 4.7e-179 632.1 665 54.4
TWI38G0202 Tripterygium wilfordii HOM05D006221 ORTHO05D007759 6.2e-179 631.7 659 54.3
PGSC0003DMG400018290 Solanum tuberosum HOM05D006221 ORTHO05D007759 3.1e-178 629.4 662 55.0
Ca_09279_v3 Cicer arietinum L. HOM05D006221 ORTHO05D007759 4.0e-178 629.0 656 53.8
CsaV3_1G038010 Cucumis sativus L. HOM05D006221 ORTHO05D007759 2.0e-177 626.7 670 52.5
Nn3g21902 Nelumbo nucifera HOM05D006221 ORTHO05D007759 7.6e-177 624.8 655 53.7
Duzib177G0418 Durio zibethinus HOM05D006221 ORTHO05D007759 9.9e-177 624.4 617 56.4
Sed0012716 Sechium edule HOM05D006221 ORTHO05D007759 2.9e-176 622.9 663 52.2
DCAR_005251 Daucus carota HOM05D006221 ORTHO05D007759 4.9e-176 622.1 673 53.0
Medtr7g111610 Medicago truncatula HOM05D006221 ORTHO05D007759 1.6e-174 617.1 674 52.4
TPR.G1625 Trifolium pratense HOM05D006221 ORTHO05D007759 1.3e-173 614.0 651 53.6
arahy.Tifrunner.gnm1.ann1.CKL802 Arachis hypogaea HOM05D006221 ORTHO05D007759 5.1e-173 612.1 666 53.2
Prupe.6G305800 Prunus persica HOM05D006221 ORTHO05D007759 5.1e-173 612.1 658 54.3
Gohir.A13G113400 Gossypium hirsutum HOM05D006221 ORTHO05D007759 6.6e-173 611.7 648 54.0
Gohir.D13G116600 Gossypium hirsutum HOM05D006221 ORTHO05D007759 6.6e-173 611.7 648 54.2
Gorai.013G131100 Gossypium raimondii HOM05D006221 ORTHO05D007759 1.5e-172 610.5 658 53.8
Psat3g014840 Pisum sativum HOM05D006221 ORTHO05D007759 1.5e-172 610.5 595 56.0
VMungo1383G1939 Vigna mungo HOM05D006221 ORTHO05D007759 3.3e-172 609.4 671 53.7
THA.LOC104816844 Tarenaya hassleriana HOM05D006221 ORTHO05D007759 2.1e-171 606.7 658 53.0
HanXRQChr14g0449401 Helianthus annuus HOM05D006221 ORTHO05D007759 2.8e-171 606.3 650 54.5
Sc16g0009350 Simmondsia chinensis HOM05D006221 ORTHO05D007759 3.6e-171 605.9 665 53.2
Phvul.001G222600 Phaseolus vulgaris HOM05D006221 ORTHO05D007759 3.1e-170 602.8 662 52.9
AT1G09450 Arabidopsis thaliana HOM05D006221 ORTHO05D007759 3.4e-169 599.4 653 51.5
Aqoxy2G02530 Aquilegia oxysepala HOM05D006221 ORTHO05D007759 4.4e-169 599.0 601 54.9
Thhalv10007117m.g Eutrema salsugineum HOM05D006221 ORTHO05D007759 4.9e-168 595.5 654 52.0
Nitab4.5_0001931g0080 Nicotiana tabacum HOM05D006221 ORTHO05D007759 2.4e-167 593.2 591 56.3
CARHR009420 Cardamine hirsuta HOM05D006221 ORTHO05D007759 7.1e-167 591.7 652 51.8
arahy.Tifrunner.gnm1.ann1.7121P0 Arachis hypogaea HOM05D006221 ORTHO05D007759 7.8e-166 588.2 666 51.5
ECA236G2609 Erigeron canadensis HOM05D006221 ORTHO05D007759 6.6e-165 585.1 654 52.4
AL1G19970 Arabidopsis lyrata HOM05D006221 ORTHO05D007759 2.5e-164 583.2 650 50.8
Sp1g08060 Schrenkiella parvula HOM05D006221 ORTHO05D007759 9.6e-164 581.3 662 50.3
Hund07275 Selenicereus undatus HOM05D006221 ORTHO05D007759 9.6e-164 581.3 657 52.7
Carub.0001s0880 Capsella rubella HOM05D006221 ORTHO05D007759 2.1e-163 580.1 653 50.8
BraA08t35366Z Brassica rapa HOM05D006221 ORTHO05D007759 5.3e-162 575.5 662 51.2
AUR62006807 Chenopodium quinoa HOM05D006221 ORTHO05D007759 5.3e-162 575.5 663 51.4
RcHm_v2.0_Chr3g0458361 Rosa chinensis HOM05D006221 ORTHO05D007759 5.3e-162 575.5 644 52.8
MBI19_g32730_MAGBIO Magnolia biondii HOM05D006221 ORTHO05D007759 7.6e-161 571.6 681 48.9
FvH4_6g08390 Fragaria vesca HOM05D006221 ORTHO05D007759 2.2e-160 570.1 654 51.8
Lsat_1_v5_gn_9_77141 Lactuca sativa HOM05D006221 ORTHO05D007759 2.2e-160 570.1 653 50.1
MD04G1187300 Malus domestica HOM05D006221 ORTHO05D007759 4.9e-160 568.9 662 51.1
Aa31LG1G5650 Aethionema arabicum HOM05D006221 ORTHO05D007759 1.1e-159 567.8 680 49.9
FAN05G2605 Fragaria x ananassa HOM05D006221 ORTHO05D007759 3.2e-159 566.2 649 51.9
AUR62000466 Chenopodium quinoa HOM05D006221 ORTHO05D007759 1.6e-158 563.9 668 51.8
A08p34550 Brassica napus HOM05D006221 ORTHO05D007759 3.5e-158 562.8 671 49.6
Hma1.2p1_0052F.1_g030440 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 6.0e-158 562.0 606 53.5
EL10Ac4g09547 Beta vulgaris HOM05D006221 ORTHO05D007759 1.0e-157 561.2 650 50.8
PSO210G0944 Papaver somniferum HOM05D006221 ORTHO05D007759 5.1e-157 558.9 661 47.8
PSO761G0564 Papaver somniferum HOM05D006221 ORTHO05D007759 1.5e-156 557.4 660 47.9
C08p12920 Brassica napus HOM05D006221 ORTHO05D007759 3.3e-156 556.2 677 48.4
unitig_699.g19069 Utricularia gibba HOM05D006221 ORTHO05D007759 4.3e-156 555.8 667 52.0
BcaB03g13298 Brassica carinata HOM05D006221 ORTHO05D007759 5.6e-156 555.4 677 48.9
FAN02G1566 Fragaria x ananassa HOM05D006221 ORTHO05D007759 6.2e-155 552.0 631 52.0
Hund07280 Selenicereus undatus HOM05D006221 ORTHO05D007759 1.4e-154 550.8 585 54.0
BolC8t48922H Brassica oleracea HOM05D006221 ORTHO05D007759 1.5e-153 547.4 689 47.6
BcaC07g38511 Brassica carinata HOM05D006221 ORTHO05D007759 3.9e-149 532.7 660 48.2
Dinv30938 Davidia involucrata HOM05D006221 ORTHO05D007759 6.7e-141 505.4 415 64.3
Zm00001eb109970 Zea mays HOM05D006221 ORTHO05D007759 4.8e-131 472.6 663 44.2
PSO017G3773 Papaver somniferum HOM05D006221 ORTHO05D007759 2.0e-129 467.2 545 48.8
HPP92_001185 Vanilla planifolia HOM05D006221 ORTHO05D007759 7.2e-127 458.8 705 42.6
Potri.013G003600 Populus trichocarpa HOM05D006221 ORTHO05D007759 2.6e-124 450.3 442 55.4
ATR0796G167 Amborella trichopoda HOM05D006221 ORTHO05D007759 3.0e-117 426.8 655 42.7
SHI18018 Sapria himalayana HOM05D006221 ORTHO05D007759 2.0e-116 424.1 560 46.2
MELO3C015244.2 Cucumis melo HOM05D006221 ORTHO05D007759 2.5e-103 380.6 415 52.8
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 3.0e-101 373.6 484 48.3
Ah.10g026960 Amaranthus hybridus HOM05D006221 ORTHO05D007759 9.1e-98 362.1 476 47.3
SEGI_23402 Sequoiadendron giganteum HOM05D006221 ORTHO05D007759 5.5e-95 352.8 741 35.9
AagrBONN_evm.TU.Sc2ySwM_228.2896 Anthoceros agrestis HOM05D006221 ORTHO05D007759 3.4e-92 343.6 431 45.0
CDE08G0155 Ceratophyllum demersum HOM05D006221 ORTHO05D007759 4.7e-86 323.2 615 35.9
Pp3c5_21110 Physcomitrium patens HOM05D006221 ORTHO05D007759 4.0e-85 320.1 384 46.6
Mapoly0101s0065 Marchantia polymorpha HOM05D006221 ORTHO05D007759 3.7e-83 313.5 440 44.5
FAN09G0827 Fragaria x ananassa HOM05D006221 ORTHO05D007759 5.4e-82 309.7 545 40.7
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 1.1e-77 295.4 388 42.5
SMO169G0298 Selaginella moellendorffii HOM05D006221 ORTHO05D007759 1.5e-60 238.4 242 51.2
Cpa.g.sc48.218 Carica papaya HOM05D006221 ORTHO05D007759 5.8e-60 236.5 575 33.0
COL.COLO4_05510 Corchorus olitorius HOM05D006221 ORTHO05D007759 1.1e-58 232.3 655 31.3
Glyma.03G228700 Glycine max HOM05D006221 ORTHO05D007759 9.0e-53 212.6 144 69.4
Cre02.g108000 Chlamydomonas reinhardtii HOM05D006221 ORTHO05D007759 2.0e-44 184.9 407 32.2
Actinidia16908 Actinidia chinensis HOM05D006221 ORTHO05D007759 2.2e-43 181.4 182 55.5
MCO05G201 Micromonas commoda HOM05D006221 ORTHO05D007759 4.5e-36 157.1 185 49.2
Lj9A230T20 Lonicera japonica HOM05D006221 ORTHO05D007759 7.6e-36 156.4 185 47.0
PRCOL_00002024 Prasinoderma coloniale HOM05D006221 ORTHO05D007759 2.9e-27 127.9 193 39.9
Nn5g27477 Nelumbo nucifera HOM05D001388 ORTHO05D001234 1.5e-23 115.5 103 59.2
C09p35620 Brassica napus HOM05D006221 ORTHO05D007759 3.4e-12 77.8 62 54.8
BolC9t56398H Brassica oleracea HOM05D006221 ORTHO05D007759 3.4e-12 77.8 62 54.8
FvH4_1g12820 Fragaria vesca HOM05D006221 ORTHO05D007759 1.8e-08 65.5 114 42.1
PRCOL_00002025 Prasinoderma coloniale HOM05D006221 ORTHO05D007759 5.1e-08 63.9 114 36.0


User provided reference genes

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