Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold66G22433 Striga asiatica HOM05D004757 ORTHO05D005743 3.8e-128 461.5 223 100.0
Migut.K00229 Erythranthe guttata HOM05D004757 ORTHO05D005743 1.4e-37 160.6 117 73.5
MSTRG.19719 Avicennia marina HOM05D004757 ORTHO05D005743 2.4e-37 159.8 127 67.7
SalBow6G1691 Salvia bowleyana HOM05D004757 ORTHO05D005743 5.2e-37 158.7 125 70.4
Migut.J01503 Erythranthe guttata HOM05D004757 ORTHO05D005743 6.9e-37 158.3 125 68.0
unitig_21.g20652 Utricularia gibba HOM05D004757 ORTHO05D005743 8.9e-37 157.9 123 68.3
Oeu025209.1 Olea europaea HOM05D004757 ORTHO05D005743 3.5e-33 146.0 133 60.9
Oeu025694.3 Olea europaea HOM05D004757 ORTHO05D005743 1.0e-32 144.4 146 57.5
MSTRG.6239 Avicennia marina HOM05D004757 ORTHO05D005743 3.0e-32 142.9 130 60.8
Actinidia01305 Actinidia chinensis HOM05D004757 ORTHO05D005743 1.3e-30 137.5 121 63.6
Peaxi162Scf01558g00012 Petunia axillaris HOM05D004757 ORTHO05D005743 2.4e-29 133.3 134 58.2
Nitab4.5_0010128g0010 Nicotiana tabacum HOM05D004757 ORTHO05D005743 5.3e-29 132.1 136 58.1
Actinidia19844 Actinidia chinensis HOM05D004757 ORTHO05D005743 2.6e-28 129.8 121 61.2
Solyc07g006960.3 Solanum lycopersicum HOM05D004757 ORTHO05D005743 2.9e-27 126.3 114 62.3
ECA234G2687 Erigeron canadensis HOM05D004757 ORTHO05D005743 3.2e-26 122.9 120 56.7
HanXRQChr09g0244371 Helianthus annuus HOM05D004757 ORTHO05D005743 9.3e-26 121.3 117 59.0
PGSC0003DMG400018757 Solanum tuberosum HOM05D004757 ORTHO05D005743 1.6e-25 120.6 124 56.5
CSS0012735 Camellia sinensis var. sinensis HOM05D004757 ORTHO05D005743 2.1e-25 120.2 133 54.9
HanXRQChr09g0254201 Helianthus annuus HOM05D004757 ORTHO05D005743 6.0e-25 118.6 124 54.0
AL3G53010 Arabidopsis lyrata HOM05D004757 ORTHO05D005743 1.8e-24 117.1 121 54.5
AT2G18910 Arabidopsis thaliana HOM05D004757 ORTHO05D005743 2.3e-24 116.7 121 54.5
DCAR_020127 Daucus carota HOM05D004757 ORTHO05D005743 2.3e-24 116.7 134 50.7
Manes.06G022800 Manihot esculenta HOM05D004757 ORTHO05D005743 2.3e-24 116.7 123 55.3
Rhsim01G0003200 Rhododendron simsii HOM05D004757 ORTHO05D005743 2.3e-24 116.7 131 53.4
Lsat_1_v5_gn_7_54961 Lactuca sativa HOM05D004757 ORTHO05D005743 3.9e-24 115.9 135 53.3
A09p12120 Brassica napus HOM05D004757 ORTHO05D005743 5.1e-24 115.5 133 51.1
Lsat_1_v5_gn_5_85101 Lactuca sativa HOM05D004757 ORTHO05D005743 5.1e-24 115.5 120 54.2
ClCG06G013460 Citrullus lanatus HOM05D004757 ORTHO05D005743 6.7e-24 115.2 123 54.5
Atru.chr7.878 Acer truncatum HOM05D004757 ORTHO05D005743 8.7e-24 114.8 124 54.0
CsaV3_1G031720 Cucumis sativus L. HOM05D004757 ORTHO05D005743 8.7e-24 114.8 123 54.5
BcaB07g31638 Brassica carinata HOM05D004757 ORTHO05D005743 1.1e-23 114.4 119 54.6
Sopen07g003050 Solanum pennellii HOM05D004757 ORTHO05D005743 1.1e-23 114.4 111 59.5
TWI34G1741 Tripterygium wilfordii HOM05D004757 ORTHO05D005743 1.1e-23 114.4 122 51.6
MELO3C017451.2 Cucumis melo HOM05D004757 ORTHO05D005743 1.5e-23 114.0 127 52.8
Aa31LG8G16000 Aethionema arabicum HOM05D004757 ORTHO05D005743 2.5e-23 113.2 119 54.6
Carub.0003s3315 Capsella rubella HOM05D004757 ORTHO05D005743 2.5e-23 113.2 119 54.6
BcaC04g22879 Brassica carinata HOM05D004757 ORTHO05D005743 4.3e-23 112.5 118 54.2
HanXRQChr10g0308501 Helianthus annuus HOM05D004757 ORTHO05D005743 4.3e-23 112.5 129 49.6
TAR626G1857 Trochodendron aralioides HOM05D004757 ORTHO05D005743 4.3e-23 112.5 118 55.9
C09p14310 Brassica napus HOM05D004757 ORTHO05D005743 9.6e-23 111.3 129 49.6
Dinv19553 Davidia involucrata HOM05D004757 ORTHO05D005743 9.6e-23 111.3 128 53.9
BraA07t27976Z Brassica rapa HOM05D004893 ORTHO05D006320 1.3e-22 110.9 120 55.0
Hma1.2p1_1303F.1_g274440 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 1.3e-22 110.9 143 50.3
Cc06_g12990 Coffea canephora HOM05D004757 ORTHO05D005743 1.6e-22 110.5 142 52.1
VMungo1215G0044 Vigna mungo HOM05D004757 ORTHO05D005743 1.6e-22 110.5 116 53.4
A07p01750 Brassica napus HOM05D004757 ORTHO05D005743 2.1e-22 110.2 120 55.0
BolC9t54334H Brassica oleracea HOM05D004757 ORTHO05D005743 2.1e-22 110.2 124 51.6
CARHR109470 Cardamine hirsuta HOM05D004757 ORTHO05D005743 2.8e-22 109.8 121 52.1
Hma1.2p1_0935F.1_g238550 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 2.8e-22 109.8 119 56.3
Lsat_1_v5_gn_8_68041 Lactuca sativa HOM05D004757 ORTHO05D005743 2.8e-22 109.8 127 50.4
Phvul.003G144000 Phaseolus vulgaris HOM05D004757 ORTHO05D005743 2.8e-22 109.8 116 53.4
Potri.018G090900 Populus trichocarpa HOM05D004757 ORTHO05D005743 2.8e-22 109.8 122 50.8
C07p03670 Brassica napus HOM05D004757 ORTHO05D005743 3.6e-22 109.4 118 50.8
BolC7t40764H Brassica oleracea HOM05D004757 ORTHO05D005743 3.6e-22 109.4 118 50.8
THA.LOC104803943 Tarenaya hassleriana HOM05D004757 ORTHO05D005743 6.2e-22 108.6 120 53.3
TWI63G0987 Tripterygium wilfordii HOM05D004757 ORTHO05D005743 6.2e-22 108.6 122 49.2
C03p59380 Brassica napus HOM05D004757 ORTHO05D005743 8.1e-22 108.2 141 47.5
Hma1.2p1_2317F.1_g319740 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 8.1e-22 108.2 119 54.6
vmacro13132 Vaccinium macrocarpon HOM05D004757 ORTHO05D005743 8.1e-22 108.2 145 44.1
Ca_21237_v3 Cicer arietinum L. HOM05D004757 ORTHO05D005743 1.1e-21 107.8 127 53.5
BcaC06g36489 Brassica carinata HOM05D004757 ORTHO05D005743 1.4e-21 107.5 123 48.0
BolC3t18202H Brassica oleracea HOM05D004757 ORTHO05D005743 1.4e-21 107.5 142 47.2
BraA09t36856Z Brassica rapa HOM05D004757 ORTHO05D005743 1.4e-21 107.5 118 53.4
ECA240G0762 Erigeron canadensis HOM05D004757 ORTHO05D005743 1.4e-21 107.5 116 52.6
Lj4g0011233 Lotus japonicus HOM05D004757 ORTHO05D005743 1.4e-21 107.5 118 54.2
Glyma.17G062100 Glycine max HOM05D004757 ORTHO05D005743 1.8e-21 107.1 118 55.9
CSS0015413 Camellia sinensis var. sinensis HOM05D004757 ORTHO05D005743 2.4e-21 106.7 122 52.5
Manes.14G157383 Manihot esculenta HOM05D004757 ORTHO05D005743 2.4e-21 106.7 124 51.6
Potri.006G166400 Populus trichocarpa HOM05D004757 ORTHO05D005743 2.4e-21 106.7 128 49.2
Cfa013398 Carpinus fangiana HOM05D004757 ORTHO05D005743 3.1e-21 106.3 112 53.6
Sed0015670 Sechium edule HOM05D004757 ORTHO05D005743 3.1e-21 106.3 123 52.8
Haze_21940 Corylus avellana HOM05D004757 ORTHO05D005743 4.0e-21 105.9 113 53.1
Hund09034 Selenicereus undatus HOM05D004757 ORTHO05D005743 4.0e-21 105.9 116 54.3
BcaB03g16684 Brassica carinata HOM05D004757 ORTHO05D005743 5.3e-21 105.5 120 54.2
A06p33080 Brassica napus HOM05D004757 ORTHO05D005743 6.9e-21 105.1 120 50.8
Gohir.A08G083700 Gossypium hirsutum HOM05D004757 ORTHO05D005743 6.9e-21 105.1 122 51.6
BraA06t26238Z Brassica rapa HOM05D004757 ORTHO05D005743 9.0e-21 104.8 125 48.8
Duzib170G0153 Durio zibethinus HOM05D004757 ORTHO05D005743 9.0e-21 104.8 126 54.0
Glyma.13G097500 Glycine max HOM05D004757 ORTHO05D005743 9.0e-21 104.8 121 53.7
Sed0003925 Sechium edule HOM05D004757 ORTHO05D005743 9.0e-21 104.8 129 52.7
CAN.G1464.4 Capsicum annuum HOM05D004757 ORTHO05D005743 1.2e-20 104.4 113 54.0
Cpa.g.sc95.44 Carica papaya HOM05D004757 ORTHO05D005743 1.2e-20 104.4 117 50.4
Duzib150G0244 Durio zibethinus HOM05D004757 ORTHO05D005743 1.2e-20 104.4 123 52.0
THA.LOC104803488 Tarenaya hassleriana HOM05D004757 ORTHO05D005743 1.2e-20 104.4 125 51.2
TAR383G0800 Trochodendron aralioides HOM05D004757 ORTHO05D005743 1.5e-20 104.0 121 53.7
EL10Ac8g18296 Beta vulgaris HOM05D004757 ORTHO05D005743 2.0e-20 103.6 114 50.9
Gohir.D08G093400 Gossypium hirsutum HOM05D004757 ORTHO05D005743 2.0e-20 103.6 122 52.5
Gorai.004G099000 Gossypium raimondii HOM05D004757 ORTHO05D005743 2.0e-20 103.6 122 52.5
Lalb_Chr13g0300141 Lupinus albus HOM05D004757 ORTHO05D005743 2.0e-20 103.6 119 53.8
HPP92_015369 Vanilla planifolia HOM05D004757 ORTHO05D005743 2.0e-20 103.6 132 50.0
PSO170G5353 Papaver somniferum HOM05D004757 ORTHO05D005743 4.5e-20 102.4 163 44.8
HanXRQChr05g0142021 Helianthus annuus HOM05D004757 ORTHO05D005743 7.6e-20 101.7 125 48.0
Thecc.09G175100 Theobroma cacao HOM05D004757 ORTHO05D005743 9.9e-20 101.3 124 50.8
ECA236G5014 Erigeron canadensis HOM05D004757 ORTHO05D005743 1.3e-19 100.9 105 52.4
Sc08g0005260 Simmondsia chinensis HOM05D004757 ORTHO05D005743 1.3e-19 100.9 112 52.7
Sc14g0001290 Simmondsia chinensis HOM05D004757 ORTHO05D005743 1.3e-19 100.9 114 49.1
Duzib168G0914 Durio zibethinus HOM05D004757 ORTHO05D005743 1.7e-19 100.5 130 50.8
Gorai.004G027500 Gossypium raimondii HOM05D004757 ORTHO05D005743 1.7e-19 100.5 127 50.4
PSO063G6152 Papaver somniferum HOM05D004757 ORTHO05D005743 1.7e-19 100.5 164 42.1
CDE04G2108 Ceratophyllum demersum HOM05D004757 ORTHO05D005743 2.2e-19 100.1 113 52.2
Psat4g012760 Pisum sativum HOM05D004757 ORTHO05D005743 2.2e-19 100.1 134 45.5
Sp3g32380 Schrenkiella parvula HOM05D004757 ORTHO05D005743 2.2e-19 100.1 119 52.1
TAR636G1688 Trochodendron aralioides HOM05D004757 ORTHO05D005743 2.2e-19 100.1 124 50.0
Gohir.A08G019400 Gossypium hirsutum HOM05D004757 ORTHO05D005743 2.9e-19 99.8 125 51.2
Medtr4g127810 Medicago truncatula HOM05D004757 ORTHO05D005743 3.8e-19 99.4 122 49.2
ATR0580G064 Amborella trichopoda HOM05D004757 ORTHO05D005743 4.9e-19 99.0 110 50.0
Ah.14g083740 Amaranthus hybridus HOM05D004757 ORTHO05D005743 8.4e-19 98.2 110 50.0
Ciclev10009829m.g Citrus clementina HOM05D004757 ORTHO05D005743 1.1e-18 97.8 126 46.8
MBI16_g31788_MAGBIO Magnolia biondii HOM05D004757 ORTHO05D005743 1.1e-18 97.8 137 43.8
ATR0030G045 Amborella trichopoda HOM05D004757 ORTHO05D005743 1.4e-18 97.4 122 48.4
Gohir.D08G030000 Gossypium hirsutum HOM05D004757 ORTHO05D005743 1.4e-18 97.4 129 48.8
CiPaw.07G193700 Carya illinoinensis HOM05D004757 ORTHO05D005743 2.4e-18 96.7 120 49.2
PGR044G0017 Punica granatum HOM05D004757 ORTHO05D005743 2.4e-18 96.7 116 48.3
Aqoxy7G02958 Aquilegia oxysepala HOM05D004757 ORTHO05D005743 3.2e-18 96.3 129 48.1
TPR.G5446 Trifolium pratense HOM05D004757 ORTHO05D005743 4.2e-18 95.9 125 48.8
Thhalv10022848m.g Eutrema salsugineum HOM05D004757 ORTHO05D005743 7.1e-18 95.1 119 47.9
Nn2g12725 Nelumbo nucifera HOM05D004757 ORTHO05D005743 9.3e-18 94.7 131 44.3
Sabra06G0128000 Salix brachista HOM05D004757 ORTHO05D005743 1.6e-17 94.0 165 38.8
QL02p098330 Quercus lobata HOM05D004757 ORTHO05D005743 2.1e-17 93.6 116 52.6
Prupe.1G082700 Prunus persica HOM05D004757 ORTHO05D005743 4.6e-17 92.4 114 50.0
CDE02G3269 Ceratophyllum demersum HOM05D004757 ORTHO05D005743 6.0e-17 92.0 110 49.1
Eucgr.C00145 Eucalyptus grandis HOM05D004757 ORTHO05D005743 1.0e-16 91.3 112 50.0
Peaxi162Scf00200g00183 Petunia axillaris HOM05D004757 ORTHO05D005743 3.0e-16 89.7 96 55.2
GSVIVG01035530001 Vitis vinifera HOM05D004757 ORTHO05D005743 3.9e-16 89.4 117 48.7
MD16G1255800 Malus domestica HOM05D004757 ORTHO05D005743 5.1e-16 89.0 126 43.7
Lalb_Chr12g0199461 Lupinus albus HOM05D004757 ORTHO05D005743 6.7e-16 88.6 125 47.2
Eucgr.L02640 Eucalyptus grandis HOM05D004757 ORTHO05D005743 1.1e-15 87.8 123 44.7
Sabra18G0078100 Salix brachista HOM05D004757 ORTHO05D005743 1.1e-15 87.8 155 41.3
Ah.09g229970 Amaranthus hybridus HOM05D004757 ORTHO05D005743 1.9e-15 87.0 143 41.3
CiPaw.08G035200 Carya illinoinensis HOM05D004757 ORTHO05D005743 1.9e-15 87.0 147 39.5
Peaxi162Scf00200g01819 Petunia axillaris HOM05D004757 ORTHO05D005743 2.1e-14 83.6 90 54.4
PGR142G2781 Punica granatum HOM05D004757 ORTHO05D005743 2.1e-14 83.6 127 40.9
FAN17G1906 Fragaria x ananassa HOM05D004757 ORTHO05D005743 4.8e-14 82.4 112 47.3
RcHm_v2.0_Chr4g0401201 Rosa chinensis HOM05D004757 ORTHO05D005743 8.1e-14 81.6 115 47.0
FvH4_4g07900 Fragaria vesca HOM05D004757 ORTHO05D005743 2.4e-13 80.1 116 45.7
MD13G1249500 Malus domestica HOM05D004757 ORTHO05D005743 9.0e-13 78.2 112 45.5
FAN12G2780 Fragaria x ananassa HOM05D004757 ORTHO05D005743 1.2e-12 77.8 135 42.2
Zm00001eb236700 Zea mays HOM05D004757 ORTHO05D005743 1.2e-12 77.8 163 36.8
FAN07G0988 Fragaria x ananassa HOM05D004757 ORTHO05D005743 1.5e-12 77.4 135 41.5
FAN22G2108 Fragaria x ananassa HOM05D004757 ORTHO05D005743 1.5e-12 77.4 135 41.5
Os02g0461900 Oryza sativa ssp. japonica HOM05D004757 ORTHO05D005743 4.5e-12 75.9 159 34.0
Zm00001eb180540 Zea mays HOM05D004757 ORTHO05D005743 5.8e-12 75.5 154 37.7
Zm00001eb420280 Zea mays HOM05D004757 ORTHO05D005743 1.0e-11 74.7 146 39.0
CANSAT11G1025 Cannabis sativa HOM05D004757 ORTHO05D005743 6.5e-11 72.0 126 39.7
Peaxi162Scf00200g00182 Petunia axillaris HOM05D004757 ORTHO05D005743 8.4e-11 71.6 102 47.1
AUR62043442 Chenopodium quinoa HOM05D000216 ORTHO05D003518 1.4e-10 70.9 94 46.8
Nn8g40409 Nelumbo nucifera HOM05D004757 ORTHO05D005743 1.6e-09 67.4 136 36.8
Zm00001eb087060 Zea mays HOM05D004757 ORTHO05D005743 1.6e-09 67.4 65 50.8
Peaxi162Scf00627g00011 Petunia axillaris HOM05D004757 ORTHO05D005743 1.8e-08 63.9 98 45.9
Dinv41223 Davidia involucrata HOM05D004757 ORTHO05D005743 4.3e-07 59.3 104 44.2
AUR62033229 Chenopodium quinoa HOM05D004757 ORTHO05D005743 6.3e-06 55.5 81 45.7


User provided reference genes

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