Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold66G22428 Striga asiatica HOM05D007139 ORTHO05D009171 5.9e-79 297.7 183 100.0
Migut.J01499 Erythranthe guttata HOM05D007139 ORTHO05D009171 7.6e-42 174.5 194 58.8
Cc06_g13070 Coffea canephora HOM05D007139 ORTHO05D009171 3.2e-40 169.1 190 56.8
Oeu025690.1 Olea europaea HOM05D007139 ORTHO05D009171 3.0e-38 162.5 191 61.8
Rhsim01G0002000 Rhododendron simsii HOM05D007139 ORTHO05D009171 1.3e-36 157.1 190 62.1
CAN.G32.11 Capsicum annuum HOM05D007139 ORTHO05D009171 2.4e-35 152.9 185 51.4
Sopen07g006630 Solanum pennellii HOM05D007139 ORTHO05D009171 3.1e-35 152.5 188 60.6
Hma1.2p1_1086F.1_g255460 Hydrangea macrophylla HOM05D007139 ORTHO05D009171 4.0e-35 152.1 191 61.8
TWI63G0338 Tripterygium wilfordii HOM05D007139 ORTHO05D009171 6.9e-35 151.4 189 59.3
MSTRG.6235 Avicennia marina HOM05D007139 ORTHO05D009171 5.8e-34 148.3 189 51.9
Nitab4.5_0000055g0210 Nicotiana tabacum HOM05D007139 ORTHO05D009171 5.8e-34 148.3 185 53.0
Nn8g40530 Nelumbo nucifera HOM05D007139 ORTHO05D009171 7.6e-34 147.9 184 50.0
FAN12G3123 Fragaria x ananassa HOM05D007139 ORTHO05D009171 9.9e-34 147.5 195 48.7
FAN22G0146 Fragaria x ananassa HOM05D007139 ORTHO05D009171 1.3e-33 147.1 195 50.8
Peaxi162Scf01054g00025 Petunia axillaris HOM05D007139 ORTHO05D009171 1.3e-33 147.1 188 53.7
GSVIVG01029235001 Vitis vinifera HOM05D007139 ORTHO05D009171 1.3e-33 147.1 187 57.8
Dinv19561 Davidia involucrata HOM05D007139 ORTHO05D009171 1.7e-33 146.7 187 60.4
FvH4_4g07780 Fragaria vesca HOM05D007139 ORTHO05D009171 2.9e-33 146.0 195 48.2
FAN07G2196 Fragaria x ananassa HOM05D007139 ORTHO05D009171 1.1e-32 144.1 195 56.9
Nitab4.5_0013636g0010 Nicotiana tabacum HOM05D007139 ORTHO05D009171 1.4e-32 143.7 185 53.5
RcHm_v2.0_Chr4g0400871 Rosa chinensis HOM05D007139 ORTHO05D009171 2.4e-32 142.9 200 49.5
PGR044G0070 Punica granatum HOM05D007139 ORTHO05D009171 4.2e-32 142.1 188 62.2
Gohir.D08G029700 Gossypium hirsutum HOM05D007139 ORTHO05D009171 2.1e-31 139.8 190 59.5
Gorai.004G027200 Gossypium raimondii HOM05D007139 ORTHO05D009171 2.1e-31 139.8 190 59.5
Potri.006G165800 Populus trichocarpa HOM05D007139 ORTHO05D009171 2.1e-31 139.8 189 45.0
Glyma.13G098100 Glycine max HOM05D007139 ORTHO05D009171 3.5e-31 139.0 190 60.0
Hund09039 Selenicereus undatus HOM05D007139 ORTHO05D009171 3.5e-31 139.0 191 60.7
CiPaw.08G034800 Carya illinoinensis HOM05D007139 ORTHO05D009171 6.0e-31 138.3 194 59.3
Cpa.g.c34934.2 Carica papaya HOM05D007139 ORTHO05D009171 7.9e-31 137.9 190 59.5
AUR62033234 Chenopodium quinoa HOM05D007139 ORTHO05D009171 7.9e-31 137.9 195 47.2
AUR62021317 Chenopodium quinoa HOM05D007139 ORTHO05D009171 1.3e-30 137.1 191 46.1
MD13G1247100 Malus domestica HOM05D007139 ORTHO05D009171 1.3e-30 137.1 189 58.7
MBI14_g08139_MAGBIO Magnolia biondii HOM05D007139 ORTHO05D009171 1.8e-30 136.7 188 56.4
Gohir.A08G019100 Gossypium hirsutum HOM05D007139 ORTHO05D009171 2.3e-30 136.3 190 56.3
TAR383G0430 Trochodendron aralioides HOM05D007139 ORTHO05D009171 3.0e-30 136.0 192 58.3
Phvul.003G143600 Phaseolus vulgaris HOM05D007139 ORTHO05D009171 8.7e-30 134.4 193 58.0
Lalb_Chr12g0199481 Lupinus albus HOM05D007139 ORTHO05D009171 1.5e-29 133.7 183 62.8
QL11p005114 Quercus lobata HOM05D007139 ORTHO05D009171 1.5e-29 133.7 193 59.1
ATR0580G128 Amborella trichopoda HOM05D007139 ORTHO05D009171 4.3e-29 132.1 180 46.1
Psat0s3717g0080 Pisum sativum HOM05D007139 ORTHO05D009171 5.6e-29 131.7 184 47.3
Aqoxy7G02982 Aquilegia oxysepala HOM05D007139 ORTHO05D009171 1.3e-28 130.6 186 56.5
Eucgr.C02387 Eucalyptus grandis HOM05D007139 ORTHO05D009171 1.3e-28 130.6 136 68.4
VMungo1215G0446 Vigna mungo HOM05D007139 ORTHO05D009171 1.6e-28 130.2 190 56.8
Cfa013405 Carpinus fangiana HOM05D007139 ORTHO05D009171 3.7e-28 129.0 192 58.9
Thhalv10014766m.g Eutrema salsugineum HOM05D007139 ORTHO05D009171 6.2e-28 128.3 183 60.1
ClCG11G011980 Citrullus lanatus HOM05D007139 ORTHO05D009171 8.1e-28 127.9 196 53.6
FAN17G0841 Fragaria x ananassa HOM05D007139 ORTHO05D009171 8.1e-28 127.9 195 51.8
Sabra06G0127600 Salix brachista HOM05D007139 ORTHO05D009171 8.1e-28 127.9 196 44.4
Atru.chr7.836 Acer truncatum HOM05D007139 ORTHO05D009171 1.8e-27 126.7 127 58.3
Actinidia02506 Actinidia chinensis HOM05D007139 ORTHO05D009171 2.4e-27 126.3 129 58.1
Glyma.17G061600 Glycine max HOM05D007139 ORTHO05D009171 5.3e-27 125.2 182 57.7
Zm00001eb226320 Zea mays HOM05D007139 ORTHO05D009171 6.9e-27 124.8 161 52.8
THA.LOC104813514 Tarenaya hassleriana HOM05D007139 ORTHO05D009171 2.0e-26 123.2 157 49.0
CDE07G0879 Ceratophyllum demersum HOM05D007139 ORTHO05D009171 2.6e-26 122.9 190 42.1
Ah.09g230020 Amaranthus hybridus HOM05D000263 ORTHO05D000213 3.4e-26 122.5 192 42.2
Gorai.009G004000 Gossypium raimondii HOM05D007139 ORTHO05D009171 3.4e-26 122.5 170 59.4
Gohir.D05G004250 Gossypium hirsutum HOM05D007139 ORTHO05D009171 4.5e-26 122.1 175 57.7
HanXRQChr12g0384691 Helianthus annuus HOM05D007139 ORTHO05D009171 4.5e-26 122.1 191 56.0
AL8G33320 Arabidopsis lyrata HOM05D007139 ORTHO05D009171 9.9e-26 120.9 185 58.4
AT5G57345 Arabidopsis thaliana HOM05D007139 ORTHO05D009171 4.9e-25 118.6 185 57.8
Sed0022431 Sechium edule HOM05D007139 ORTHO05D009171 4.9e-25 118.6 131 69.5
vmacro13142 Vaccinium macrocarpon HOM05D007139 ORTHO05D009171 4.9e-25 118.6 192 54.2
CARHR271140 Cardamine hirsuta HOM05D007139 ORTHO05D009171 1.1e-24 117.5 186 57.5
ECA234G0508 Erigeron canadensis HOM05D007139 ORTHO05D009171 7.1e-24 114.8 194 50.5
Lsat_1_v5_gn_5_85520 Lactuca sativa HOM05D007139 ORTHO05D009171 1.2e-23 114.0 193 51.8
Sc18g0007530 Simmondsia chinensis HOM05D007139 ORTHO05D009171 1.2e-23 114.0 156 60.3
BcaB05g22339 Brassica carinata HOM05D007139 ORTHO05D009171 2.1e-23 113.2 155 62.6
SEGI_32174 Sequoiadendron giganteum HOM05D007139 ORTHO05D009171 2.1e-23 113.2 165 47.9
MELO3C004003.2 Cucumis melo HOM05D007139 ORTHO05D009171 2.7e-23 112.8 192 41.1
Ciclev10009657m.g Citrus clementina HOM05D007139 ORTHO05D009171 3.5e-23 112.5 184 42.9
Medtr4g127690 Medicago truncatula HOM05D007139 ORTHO05D009171 6.0e-23 111.7 197 44.7
Os06g0694800 Oryza sativa ssp. japonica HOM05D007139 ORTHO05D009171 7.9e-23 111.3 129 69.8
HPP92_017140 Vanilla planifolia HOM05D007139 ORTHO05D009171 1.3e-22 110.5 128 49.2
Carub.0008s1786 Capsella rubella HOM05D007139 ORTHO05D009171 3.0e-22 109.4 185 45.4
A02p08570 Brassica napus HOM05D007139 ORTHO05D009171 8.7e-22 107.8 128 53.1
BraA02t05926Z Brassica rapa HOM05D007139 ORTHO05D009171 8.7e-22 107.8 128 53.1
Lj4g0008370 Lotus japonicus HOM05D007139 ORTHO05D009171 1.1e-21 107.5 128 53.1
PSO063G4029 Papaver somniferum HOM05D007139 ORTHO05D009171 1.5e-21 107.1 199 43.7
CsaV3_2G008540 Cucumis sativus L. HOM05D007139 ORTHO05D009171 1.9e-21 106.7 145 61.4
Lju50A10T16 Lonicera japonica HOM05D007139 ORTHO05D009171 9.6e-21 104.4 78 73.1
CiPaw.07G194300 Carya illinoinensis HOM05D007139 ORTHO05D009171 1.6e-20 103.6 193 41.5
DCAR_020130 Daucus carota HOM05D007139 ORTHO05D009171 1.6e-20 103.6 130 66.9
PSO170G0255 Papaver somniferum HOM05D007139 ORTHO05D009171 2.1e-20 103.2 204 44.6
Aa31LG3G13220 Aethionema arabicum HOM05D007139 ORTHO05D009171 8.2e-20 101.3 129 51.9
Manes.14G157565 Manihot esculenta HOM05D007139 ORTHO05D009171 1.4e-19 100.5 186 40.3
Ah.14g083710 Amaranthus hybridus HOM05D007139 ORTHO05D009171 1.8e-19 100.1 191 38.2
Hund09038 Selenicereus undatus HOM05D007139 ORTHO05D009171 1.8e-19 100.1 167 41.9
BcaC03g14161 Brassica carinata HOM05D007139 ORTHO05D009171 1.2e-18 97.4 183 51.4
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 1.5e-18 97.1 123 53.7
TPR.G5382 Trifolium pratense HOM05D007139 ORTHO05D009171 1.5e-18 97.1 79 69.6
Lsat_1_v5_gn_1_19521 Lactuca sativa HOM05D007139 ORTHO05D009171 2.0e-18 96.7 122 64.8
Thecc.09G178100 Theobroma cacao HOM05D007139 ORTHO05D009171 8.4e-17 91.3 187 36.9
Haze_21948 Corylus avellana HOM05D007139 ORTHO05D009171 1.9e-16 90.1 108 56.5
A10p14810 Brassica napus HOM05D007139 ORTHO05D009171 2.1e-15 86.7 93 55.9
Duzib168G1431 Durio zibethinus HOM05D007139 ORTHO05D009171 2.7e-15 86.3 180 37.8
CANSAT11G2567 Cannabis sativa HOM05D007139 ORTHO05D009171 1.8e-14 83.6 186 38.2
COL.COLO4_06001 Corchorus olitorius HOM05D007139 ORTHO05D009171 8.7e-14 81.3 191 35.1
EL10Ac8g18300 Beta vulgaris HOM05D007139 ORTHO05D009171 2.5e-13 79.7 192 33.9
Duzib150G0167 Durio zibethinus HOM05D007139 ORTHO05D009171 2.8e-12 76.3 175 40.6
Gohir.A05G003850 Gossypium hirsutum HOM05D007139 ORTHO05D009171 7.7e-10 68.2 108 42.6
Sp6g19070 Schrenkiella parvula HOM05D007139 ORTHO05D009171 1.4e-08 63.9 84 72.6
Haze_21949 Corylus avellana HOM05D007139 ORTHO05D009171 1.6e-07 60.5 79 72.2
AagrBONN_evm.TU.Sc2ySwM_344.2913 Anthoceros agrestis HOM05D007139 ORTHO05D009171 6.7e-06 55.1 108 39.8


User provided reference genes

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