Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold66G22424 Striga asiatica HOM05D050165 ORTHO05D008293 2.4e-125 452.2 230 100.0
SGA_v2.0_scaffold69G23240 Striga asiatica HOM05D050165 ORTHO05D008293 9.5e-34 147.9 233 43.3
MSTRG.6233 Avicennia marina HOM05D007665 ORTHO05D008293 5.4e-21 105.5 225 38.2
MSTRG.19714 Avicennia marina HOM05D007665 ORTHO05D008293 2.9e-14 83.2 141 44.7
Dinv19563 Davidia involucrata HOM05D007665 ORTHO05D008293 6.7e-11 72.0 227 32.2
CiPaw.08G034700 Carya illinoinensis HOM05D007665 ORTHO05D008293 8.7e-11 71.6 295 26.8
BcaC04g19976 Brassica carinata HOM05D010683 ORTHO05D008293 3.3e-10 69.7 199 30.2
C09p49230 Brassica napus HOM05D010683 ORTHO05D008293 3.3e-10 69.7 199 30.2
BolC9t57773H Brassica oleracea HOM05D010683 ORTHO05D008293 3.3e-10 69.7 199 30.2
Potri.018G090000 Populus trichocarpa HOM05D007665 ORTHO05D008293 5.6e-10 68.9 238 30.3
QL11p005089 Quercus lobata HOM05D007665 ORTHO05D008293 1.1e-08 64.7 295 25.8
Sabra18G0077500 Salix brachista HOM05D007665 ORTHO05D008293 1.8e-08 63.9 251 29.9
Lsat_1_v5_gn_5_85601 Lactuca sativa HOM05D007665 ORTHO05D008293 3.1e-08 63.2 190 30.0
Cc06_g13100 Coffea canephora HOM05D007665 ORTHO05D008293 4.0e-08 62.8 100 48.0
A10p14800 Brassica napus HOM05D010683 ORTHO05D008293 6.9e-08 62.0 198 28.8
Thecc.09G178300 Theobroma cacao HOM05D007665 ORTHO05D008293 6.9e-08 62.0 240 27.5
Sp6g19060 Schrenkiella parvula HOM05D010683 ORTHO05D008293 9.0e-08 61.6 202 30.7
Potri.006G165500 Populus trichocarpa HOM05D007665 ORTHO05D008293 1.5e-07 60.8 231 29.9
TAR625G0485 Trochodendron aralioides HOM05D007665 ORTHO05D008293 2.0e-07 60.5 97 46.4
COL.COLO4_35626 Corchorus olitorius HOM05D007665 ORTHO05D008293 3.4e-07 59.7 270 27.4
Gohir.D08G093300 Gossypium hirsutum HOM05D007665 ORTHO05D008293 3.4e-07 59.7 239 27.6
Ciclev10009102m.g Citrus clementina HOM05D007665 ORTHO05D008293 5.8e-07 58.9 109 39.4
Cfa013407 Carpinus fangiana HOM05D007665 ORTHO05D008293 1.0e-06 58.2 238 26.1
PSO063G5967 Papaver somniferum HOM05D007665 ORTHO05D008293 1.3e-06 57.8 145 37.2
Sed0009111 Sechium edule HOM05D007665 ORTHO05D008293 1.3e-06 57.8 223 26.0
Actinidia01304 Actinidia chinensis HOM05D007665 ORTHO05D008293 1.7e-06 57.4 155 32.9
BcaB08g36093 Brassica carinata HOM05D010683 ORTHO05D008293 2.2e-06 57.0 47 59.6
A02p08580 Brassica napus HOM05D010683 ORTHO05D008293 2.2e-06 57.0 215 28.8
BraA02t05927Z Brassica rapa HOM05D010683 ORTHO05D008293 2.2e-06 57.0 215 28.8
Duzib150G0483 Durio zibethinus HOM05D007665 ORTHO05D008293 3.8e-06 56.2 69 47.8
Prupe.1G081700 Prunus persica HOM05D007665 ORTHO05D008293 3.8e-06 56.2 126 33.3
CiPaw.07G194500 Carya illinoinensis HOM05D007665 ORTHO05D008293 4.9e-06 55.8 150 32.0
PGR142G3274 Punica granatum HOM05D007665 ORTHO05D008293 4.9e-06 55.8 144 34.0
Sabra06G0127300 Salix brachista HOM05D007665 ORTHO05D008293 4.9e-06 55.8 101 37.6
Manes.06G022200 Manihot esculenta HOM05D007665 ORTHO05D008293 6.4e-06 55.5 80 43.8
Oeu056507.1 Olea europaea HOM05D007665 ORTHO05D008293 6.4e-06 55.5 163 28.8
Atru.chr7.835 Acer truncatum HOM05D007665 ORTHO05D008293 8.4e-06 55.1 49 59.2
CANSAT11G1651 Cannabis sativa HOM05D007665 ORTHO05D008293 8.4e-06 55.1 281 26.3
CARHR271130 Cardamine hirsuta HOM05D010683 ORTHO05D008293 8.4e-06 55.1 47 61.7
GSVIVG01029234001 Vitis vinifera HOM05D007665 ORTHO05D008293 8.4e-06 55.1 47 57.4


User provided reference genes

Program Settings