Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 8.2e-102 373.6 176 100.0
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 1.2e-63 246.9 174 63.8
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 2.8e-49 199.1 132 65.2
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 8.3e-38 161.0 167 41.9
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 9.2e-37 157.5 166 45.2
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 3.0e-35 152.5 166 44.0
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 5.1e-35 151.8 167 43.7
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 8.6e-35 151.0 167 38.9
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.9e-34 149.8 164 44.5
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 7.3e-34 147.9 170 41.8
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 1.2e-33 147.1 167 43.7
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.8e-32 141.4 165 43.0
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 1.2e-31 140.6 166 44.6
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 1.2e-31 140.6 166 41.6
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.2e-31 140.6 168 41.1
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.5e-31 140.2 166 42.2
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.5e-31 140.2 166 42.2
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.3e-30 137.1 166 42.2
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 1.7e-30 136.7 167 40.7
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 2.2e-30 136.3 168 39.9
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 6.4e-30 134.8 166 39.2
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 1.1e-29 134.0 166 41.0
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 1.9e-29 133.3 167 38.3
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 2.4e-29 132.9 167 39.5
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 5.4e-29 131.7 157 40.1
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 7.1e-29 131.3 167 38.3
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.6e-28 130.2 168 36.3
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.1e-28 129.8 166 39.2
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.5e-28 129.0 165 35.2
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 7.8e-28 127.9 168 39.3
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.0e-27 127.5 166 39.2
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.0e-27 127.5 166 38.6
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 5.1e-27 125.2 174 39.7
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 8.7e-27 124.4 177 38.4
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 2.1e-25 119.8 166 36.7
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 6.2e-25 118.2 135 39.3
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.1e-24 115.9 143 39.2
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.1e-24 115.9 165 36.4
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 5.8e-23 111.7 169 34.3
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 4.9e-22 108.6 138 37.0
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.4e-22 108.2 123 43.9
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.1e-21 104.8 136 39.0
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 6.0e-20 101.7 144 32.6
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.3e-19 100.5 125 36.8
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.6e-18 94.4 109 44.0
Sc06g0009580 Simmondsia chinensis HOM05D002024 ORTHO05D007288 6.9e-16 88.2 119 37.8
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.0e-16 87.8 113 37.2
Ah.08g216590 Amaranthus hybridus HOM05D008174 ORTHO05D010206 2.0e-15 86.7 148 35.1
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.2e-14 83.2 117 37.6
FAN10G2415 Fragaria x ananassa HOM05D008174 ORTHO05D010206 6.0e-12 75.1 157 29.3
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 6.0e-12 75.1 130 27.7
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 5.6e-10 68.6 124 28.2
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 5.6e-10 68.6 125 28.8
CSS0024620 Camellia sinensis var. sinensis HOM05D008174 ORTHO05D010206 1.3e-09 67.4 85 35.3
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 2.8e-09 66.2 110 36.4
Peaxi162Scf00164g00103 Petunia axillaris HOM05D008174 ORTHO05D010206 6.2e-09 65.1 64 37.5
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 3.1e-08 62.8 130 28.5
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.0e-08 62.4 113 28.3
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 5.3e-08 62.0 130 23.1
Actinidia24475 Actinidia chinensis HOM05D008174 ORTHO05D010206 1.2e-07 60.8 130 28.5
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 4.5e-07 58.9 126 26.2
FAN06G2767 Fragaria x ananassa HOM05D008174 ORTHO05D010206 2.2e-06 56.6 102 34.3
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 4.9e-06 55.5 111 28.8


User provided reference genes

Program Settings