Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold66G22407 Striga asiatica HOM05D006208 ORTHO05D007606 2.8e-135 485.3 254 100.0
MSTRG.19726 Avicennia marina HOM05D006208 ORTHO05D007606 3.3e-88 328.9 250 70.0
Migut.B00931 Erythranthe guttata HOM05D006208 ORTHO05D007606 1.3e-84 317.0 246 67.5
SalBow6G5221 Salvia bowleyana HOM05D006208 ORTHO05D007606 2.3e-81 306.2 253 63.6
unitig_0.g581 Utricularia gibba HOM05D006208 ORTHO05D007606 8.0e-74 281.2 245 61.2
Nitab4.5_0015172g0010 Nicotiana tabacum HOM05D006208 ORTHO05D007606 1.8e-70 270.0 248 58.5
Sopen10g035070 Solanum pennellii HOM05D006208 ORTHO05D007606 1.2e-69 267.3 249 57.0
PGSC0003DMG400008402 Solanum tuberosum HOM05D006208 ORTHO05D007606 2.7e-69 266.2 246 57.3
Nitab4.5_0000381g0210 Nicotiana tabacum HOM05D006208 ORTHO05D007606 1.3e-68 263.8 226 60.6
Solyc10g085660.3 Solanum lycopersicum HOM05D006208 ORTHO05D007606 2.9e-68 262.7 246 56.1
CAN.G1018.11 Capsicum annuum HOM05D006208 ORTHO05D007606 2.5e-67 259.6 250 54.0
Cc03_g15330 Coffea canephora HOM05D006208 ORTHO05D007606 5.2e-65 251.9 255 53.3
Lj1A1159G88 Lonicera japonica HOM05D006208 ORTHO05D007606 8.8e-65 251.1 248 57.7
GSVIVG01029918001 Vitis vinifera HOM05D006208 ORTHO05D007606 1.5e-64 250.4 249 55.0
TWI34G1475 Tripterygium wilfordii HOM05D006208 ORTHO05D007606 6.3e-63 245.0 243 52.7
vmacro07634 Vaccinium macrocarpon HOM05D006208 ORTHO05D007606 2.9e-60 236.1 248 53.2
Manes.08G150900 Manihot esculenta HOM05D006208 ORTHO05D007606 3.3e-59 232.6 228 53.5
Dinv14560 Davidia involucrata HOM05D006208 ORTHO05D007606 5.6e-59 231.9 247 52.2
Gohir.D13G101700 Gossypium hirsutum HOM05D006208 ORTHO05D007606 5.6e-59 231.9 231 52.8
Thecc.05G239100 Theobroma cacao HOM05D006208 ORTHO05D007606 5.6e-59 231.9 243 51.0
Gorai.013G113800 Gossypium raimondii HOM05D006208 ORTHO05D007606 1.2e-58 230.7 231 52.4
Glyma.19G119400 Glycine max HOM05D006208 ORTHO05D007606 4.7e-58 228.8 224 52.2
Gohir.A13G096300 Gossypium hirsutum HOM05D006208 ORTHO05D007606 4.7e-58 228.8 231 52.4
Peaxi162Scf00146g00097 Petunia axillaris HOM05D006208 ORTHO05D007606 6.1e-58 228.4 249 47.0
Ca_03440_v3 Cicer arietinum L. HOM05D006208 ORTHO05D007606 8.0e-58 228.0 246 50.8
Ca_08778_v3 Cicer arietinum L. HOM05D006208 ORTHO05D007606 8.0e-58 228.0 246 50.8
MD12G1014000 Malus domestica HOM05D006208 ORTHO05D007606 1.0e-57 227.6 226 54.9
QL07p016540 Quercus lobata HOM05D006208 ORTHO05D007606 1.4e-57 227.3 246 52.8
Ciclev10032470m.g Citrus clementina HOM05D006208 ORTHO05D007606 1.8e-57 226.9 250 50.0
VMungo1383G1214 Vigna mungo HOM05D006208 ORTHO05D007606 1.8e-57 226.9 227 52.9
EL10As12g24012 Beta vulgaris HOM05D006208 ORTHO05D007606 4.0e-57 225.7 256 50.8
MELO3C019160.2 Cucumis melo HOM05D006208 ORTHO05D007606 8.9e-57 224.6 230 53.5
Nn8g39480 Nelumbo nucifera HOM05D006208 ORTHO05D007606 8.9e-57 224.6 249 49.0
Duzib177G0527 Durio zibethinus HOM05D006208 ORTHO05D007606 2.6e-56 223.0 243 50.2
AL1G19150 Arabidopsis lyrata HOM05D006208 ORTHO05D007606 7.5e-56 221.5 248 49.2
CANSAT78G0878 Cannabis sativa HOM05D006208 ORTHO05D007606 1.3e-55 220.7 257 50.2
Lalb_Chr22g0358421 Lupinus albus HOM05D006208 ORTHO05D007606 1.7e-55 220.3 246 51.2
CiPaw.09G165300 Carya illinoinensis HOM05D006208 ORTHO05D007606 2.2e-55 219.9 230 53.9
RcHm_v2.0_Chr3g0495701 Rosa chinensis HOM05D006208 ORTHO05D007606 2.9e-55 219.5 246 48.8
COL.COLO4_08902 Corchorus olitorius HOM05D006208 ORTHO05D007606 3.7e-55 219.2 246 50.0
Potri.013G067600 Populus trichocarpa HOM05D006208 ORTHO05D007606 6.4e-55 218.4 227 50.7
BcaB07g34110 Brassica carinata HOM05D006208 ORTHO05D007606 8.3e-55 218.0 225 50.2
CARHR008630 Cardamine hirsuta HOM05D006208 ORTHO05D007606 8.3e-55 218.0 228 51.3
FAN04G2426 Fragaria x ananassa HOM05D006208 ORTHO05D007606 8.3e-55 218.0 223 52.9
FAN13G0695 Fragaria x ananassa HOM05D006208 ORTHO05D007606 8.3e-55 218.0 244 49.6
Sabra13G0059000 Salix brachista HOM05D006208 ORTHO05D007606 1.1e-54 217.6 227 52.0
Cfa019872 Carpinus fangiana HOM05D006208 ORTHO05D007606 2.4e-54 216.5 226 51.8
Medtr7g087140 Medicago truncatula HOM05D006208 ORTHO05D007606 3.2e-54 216.1 226 51.8
Eucgr.K01547 Eucalyptus grandis HOM05D006208 ORTHO05D007606 4.1e-54 215.7 245 49.0
AT1G08710 Arabidopsis thaliana HOM05D006208 ORTHO05D007606 7.0e-54 214.9 227 50.2
Carub.0001s0806 Capsella rubella HOM05D006208 ORTHO05D007606 9.2e-54 214.5 245 47.3
Hund10725 Selenicereus undatus HOM05D006208 ORTHO05D007606 9.2e-54 214.5 258 47.7
Hma1.2p1_1127F.1_g259670 Hydrangea macrophylla HOM05D006208 ORTHO05D007606 1.6e-53 213.8 251 50.6
arahy.Tifrunner.gnm1.ann1.71CHM8 Arachis hypogaea HOM05D006208 ORTHO05D007606 2.0e-53 213.4 250 48.8
FAN18G4346 Fragaria x ananassa HOM05D006208 ORTHO05D007606 2.7e-53 213.0 223 53.8
BraA06t23774Z Brassica rapa HOM05D000200 ORTHO05D000262 4.6e-53 212.2 245 46.5
A06p05650 Brassica napus HOM05D000200 ORTHO05D000262 5.9e-53 211.8 245 46.5
Lj1g0003173 Lotus japonicus HOM05D006208 ORTHO05D007606 1.7e-52 210.3 246 48.8
BcaC05g24798 Brassica carinata HOM05D006208 ORTHO05D007606 2.3e-52 209.9 245 45.3
Peaxi162Scf00146g00107 Petunia axillaris HOM05D006208 ORTHO05D007606 3.0e-52 209.5 223 50.2
Peaxi162Scf62544g00003 Petunia axillaris HOM05D006208 ORTHO05D007606 3.0e-52 209.5 223 50.2
FvH4_5g39040 Fragaria vesca HOM05D006208 ORTHO05D007606 5.0e-52 208.8 223 52.0
AUR62036506 Chenopodium quinoa HOM05D006208 ORTHO05D007606 6.6e-52 208.4 257 45.5
ECA232G0512 Erigeron canadensis HOM05D006208 ORTHO05D007606 1.2e-50 204.1 246 48.4
MBI19_g04334_MAGBIO Magnolia biondii HOM05D006208 ORTHO05D007606 2.1e-50 203.4 244 45.9
ClCG04G006060 Citrullus lanatus HOM05D006208 ORTHO05D007606 1.4e-49 200.7 270 45.2
Hma1.2p1_0776F.1_g216610 Hydrangea macrophylla HOM05D006208 ORTHO05D007606 2.3e-49 199.9 227 51.5
Aqoxy6G01592 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 5.2e-49 198.7 250 44.8
DCAR_020701 Daucus carota HOM05D006208 ORTHO05D007606 6.8e-49 198.4 253 45.8
Thhalv10008513m.g Eutrema salsugineum HOM05D006208 ORTHO05D007606 3.4e-48 196.1 225 49.3
FvH4_3g02594 Fragaria vesca HOM05D006208 ORTHO05D007606 7.5e-48 194.9 229 46.7
Phvul.001G107700 Phaseolus vulgaris HOM05D006208 ORTHO05D007606 1.3e-47 194.1 200 50.0
THA.LOC104798848 Tarenaya hassleriana HOM05D006208 ORTHO05D007606 2.2e-47 193.4 245 46.1
Sed0009124 Sechium edule HOM05D006208 ORTHO05D007606 2.9e-47 193.0 227 49.3
Psat3g085200 Pisum sativum HOM05D006208 ORTHO05D007606 3.7e-47 192.6 202 50.0
Aa31sc449G40 Aethionema arabicum HOM05D006208 ORTHO05D007606 6.4e-47 191.8 246 42.7
Haze_20379 Corylus avellana HOM05D006208 ORTHO05D007606 2.4e-46 189.9 226 47.3
Atru.chr2.1570 Acer truncatum HOM05D006208 ORTHO05D007606 1.2e-45 187.6 245 45.3
Sp1g07360 Schrenkiella parvula HOM05D006208 ORTHO05D007606 1.7e-44 183.7 245 44.9
arahy.Tifrunner.gnm1.ann1.2NMK5X Arachis hypogaea HOM05D006208 ORTHO05D007606 3.0e-44 183.0 200 50.5
HanXRQChr09g0255371 Helianthus annuus HOM05D006208 ORTHO05D007606 3.0e-44 183.0 215 50.2
ATR0068G109 Amborella trichopoda HOM05D006208 ORTHO05D007606 1.9e-43 180.3 228 42.1
HPP92_022884 Vanilla planifolia HOM05D006208 ORTHO05D007606 3.3e-43 179.5 239 42.3
CsaV3_4G029050 Cucumis sativus L. HOM05D006208 ORTHO05D007606 1.4e-41 174.1 191 50.3
Ah.12g062010 Amaranthus hybridus HOM05D006208 ORTHO05D007606 9.8e-40 167.9 216 47.2
TAR636G0902 Trochodendron aralioides HOM05D006208 ORTHO05D007606 1.9e-38 163.7 159 56.0
Pp3c18_14450 Physcomitrium patens HOM05D006208 ORTHO05D007606 4.1e-38 162.5 232 37.5
Lsat_1_v5_gn_4_159701 Lactuca sativa HOM05D006208 ORTHO05D007606 2.3e-36 156.8 188 47.9
SEGI_27241 Sequoiadendron giganteum HOM05D006208 ORTHO05D007606 3.9e-36 156.0 250 36.4
Cpa.g.sc73.15 Carica papaya HOM05D006208 ORTHO05D007606 7.3e-35 151.8 161 49.7
CDE09G0594 Ceratophyllum demersum HOM05D002946 ORTHO05D007606 3.8e-31 139.4 159 50.3
Rhsim03G0045600 Rhododendron simsii HOM05D006208 ORTHO05D007606 3.2e-30 136.3 157 50.3
Zm00001eb149890 Zea mays HOM05D006208 ORTHO05D007606 2.3e-28 130.2 191 39.3
Os01g0814700 Oryza sativa ssp. japonica HOM05D006208 ORTHO05D007606 1.1e-27 127.9 194 37.1
Prupe.7G018500 Prunus persica HOM05D006208 ORTHO05D007606 3.6e-26 122.9 152 46.7
Rhsim03G0045700 Rhododendron simsii HOM05D006208 ORTHO05D007606 1.4e-25 120.9 96 60.4
AUR62037069 Chenopodium quinoa HOM05D006208 ORTHO05D007606 1.2e-24 117.9 117 52.1
Sc22g0000860 Simmondsia chinensis HOM05D006208 ORTHO05D007606 3.4e-24 116.3 82 67.1
TPR.G7831 Trifolium pratense HOM05D006208 ORTHO05D007606 4.4e-24 115.9 159 43.4
C05p06800 Brassica napus HOM05D006208 ORTHO05D007606 8.4e-23 111.7 146 39.0
BolC5t29439H Brassica oleracea HOM05D006208 ORTHO05D007606 1.1e-22 111.3 146 39.0
TPR.G35926 Trifolium pratense HOM05D006208 ORTHO05D007606 7.1e-22 108.6 79 65.8
SMO351G0165 Selaginella moellendorffii HOM05D006208 ORTHO05D007606 2.7e-21 106.7 226 30.1
CBR_g36542 Chara braunii HOM05D006208 ORTHO05D007606 4.6e-21 105.9 217 30.9
SalBow5G5293 Salvia bowleyana HOM05D000001 ORTHO05D009952 1.5e-19 100.9 190 40.0
FAN08G0500 Fragaria x ananassa HOM05D006208 ORTHO05D007606 4.3e-19 99.4 87 59.8
SHI14855 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-18 97.8 164 39.6
Oeu054958.1 Olea europaea HOM05D006208 ORTHO05D007606 2.1e-18 97.1 80 61.2
VMungo1383G2538 Vigna mungo HOM05D006208 ORTHO05D007606 3.4e-16 89.7 163 36.2
FAN21G1425 Fragaria x ananassa HOM05D006208 ORTHO05D007606 1.3e-15 87.8 93 50.5
Medtr7g087170 Medicago truncatula HOM05D006208 ORTHO05D007606 1.7e-15 87.4 103 46.6
Pp3c18_14463 Physcomitrium patens HOM05D006208 ORTHO05D007606 9.3e-14 81.6 111 40.5
Sc22g0000880 Simmondsia chinensis HOM05D006208 ORTHO05D007606 1.5e-11 74.3 164 31.1
TPR.G7822 Trifolium pratense HOM05D006208 ORTHO05D007606 1.5e-11 74.3 56 55.4
TPR.G15311 Trifolium pratense HOM05D006208 ORTHO05D007606 2.5e-11 73.6 100 37.0
AagrBONN_evm.TU.Sc2ySwM_117.1480 Anthoceros agrestis HOM05D006208 ORTHO05D007606 4.3e-11 72.8 176 31.2
Peaxi162Scf00146g00108 Petunia axillaris HOM05D006208 ORTHO05D007606 1.3e-10 71.2 104 38.5
C05p06810 Brassica napus HOM05D000200 ORTHO05D000262 3.1e-09 66.6 79 46.8
BolC5t29440H Brassica oleracea HOM05D000200 ORTHO05D000262 3.1e-09 66.6 79 46.8
Oeu029768.1 Olea europaea HOM05D006208 ORTHO05D007606 3.1e-09 66.6 92 35.9
Aqoxy3G03625 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 4.0e-09 66.2 147 31.3
Oeu029769.2 Olea europaea HOM05D006208 ORTHO05D007606 5.3e-09 65.9 55 47.3
Medtr7g087330 Medicago truncatula HOM05D006208 ORTHO05D007606 1.2e-08 64.7 77 46.8
SHI14857 Sapria himalayana HOM05D006208 ORTHO05D007606 1.2e-08 64.7 97 36.1
Oeu032547.1 Olea europaea HOM05D006208 ORTHO05D007606 9.9e-08 61.6 55 47.3
Peaxi162Scf00146g00098 Petunia axillaris HOM05D006208 ORTHO05D007606 8.4e-07 58.5 44 54.5
Aqoxy3G03662 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 1.1e-06 58.2 148 27.7
SEGI_30866 Sequoiadendron giganteum HOM05D006208 ORTHO05D007606 4.2e-06 56.2 85 35.3


User provided reference genes

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