Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold66G22394 Striga asiatica HOM05D006370 ORTHO05D008324 1.0e-91 340.1 178 100.0
SGA_v2.0_scaffold69G23224 Striga asiatica HOM05D006370 ORTHO05D008324 2.2e-46 189.5 170 64.7
MSTRG.6248 Avicennia marina HOM05D006370 ORTHO05D008324 4.8e-33 145.2 171 56.7
SalBow6G1190 Salvia bowleyana HOM05D006370 ORTHO05D008324 8.5e-30 134.4 176 50.0
Migut.J01529 Erythranthe guttata HOM05D006370 ORTHO05D008324 5.1e-27 125.2 178 48.3
Cc10_g11540 Coffea canephora HOM05D006370 ORTHO05D008324 2.2e-25 119.8 171 48.5
vmacro07654 Vaccinium macrocarpon HOM05D006370 ORTHO05D008324 2.1e-20 103.2 169 46.2
Duzib177G0489 Durio zibethinus HOM05D006370 ORTHO05D008324 2.7e-20 102.8 158 46.8
Rhsim03G0049800 Rhododendron simsii HOM05D006370 ORTHO05D008324 7.9e-20 101.3 186 41.9
unitig_744.g24144 Utricularia gibba HOM05D006370 ORTHO05D000703 1.8e-19 100.1 188 44.1
Aqoxy1G00517 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 1.1e-18 97.4 170 39.4
GSVIVG01022435001 Vitis vinifera HOM05D006370 ORTHO05D008324 1.1e-18 97.4 161 44.7
Cfa017718 Carpinus fangiana HOM05D006370 ORTHO05D008324 2.0e-18 96.7 162 43.2
CiPaw.09G166900 Carya illinoinensis HOM05D006370 ORTHO05D008324 4.4e-18 95.5 167 43.1
HanXRQChr01g0026941 Helianthus annuus HOM05D006370 ORTHO05D008324 5.7e-18 95.1 168 44.0
Lj1A1073T41 Lonicera japonica HOM05D006370 ORTHO05D008324 7.4e-18 94.7 171 43.3
Nn2g14550 Nelumbo nucifera HOM05D006370 ORTHO05D008324 1.3e-17 94.0 172 41.9
Duzib128G1808 Durio zibethinus HOM05D006370 ORTHO05D008324 3.7e-17 92.4 159 41.5
Hma1.2p1_0526F.1_g172840 Hydrangea macrophylla HOM05D006370 ORTHO05D008324 6.3e-17 91.7 168 43.5
Thecc.05G242700 Theobroma cacao HOM05D006370 ORTHO05D008324 1.1e-16 90.9 158 43.0
EL10Ac5g11708 Beta vulgaris HOM05D006370 ORTHO05D008324 1.4e-16 90.5 167 42.5
Manes.09G136900 Manihot esculenta HOM05D006370 ORTHO05D008324 2.4e-16 89.7 172 41.9
TWI60G1203 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 2.4e-16 89.7 155 41.3
Ciclev10022640m.g Citrus clementina HOM05D006370 ORTHO05D008324 3.1e-16 89.4 148 44.6
COL.COLO4_28633 Corchorus olitorius HOM05D006370 ORTHO05D008324 3.1e-16 89.4 160 43.8
TAR623G1163 Trochodendron aralioides HOM05D006370 ORTHO05D008324 3.1e-16 89.4 175 42.3
Potri.013G065200 Populus trichocarpa HOM05D006370 ORTHO05D008324 5.3e-16 88.6 149 43.6
Atru.chr2.1510 Acer truncatum HOM05D006370 ORTHO05D008324 6.9e-16 88.2 167 41.9
MD12G1010600 Malus domestica HOM05D006370 ORTHO05D008324 9.1e-16 87.8 156 42.3
AT5G37480 Arabidopsis thaliana HOM05D006370 ORTHO05D008324 1.2e-15 87.4 152 39.5
Eucgr.K01528 Eucalyptus grandis HOM05D006370 ORTHO05D008324 1.2e-15 87.4 156 45.5
Medtr6g027600 Medicago truncatula HOM05D006370 ORTHO05D008324 1.2e-15 87.4 143 41.3
Eucgr.K01533 Eucalyptus grandis HOM05D006370 ORTHO05D008324 2.0e-15 86.7 168 44.0
PSO339G2906 Papaver somniferum HOM05D006370 ORTHO05D008324 2.6e-15 86.3 157 38.2
AUR62043361 Chenopodium quinoa HOM05D006370 ORTHO05D008324 4.5e-15 85.5 160 40.6
ECA248G1067 Erigeron canadensis HOM05D006370 ORTHO05D008324 4.5e-15 85.5 165 38.2
FAN26G3131 Fragaria x ananassa HOM05D006370 ORTHO05D008324 4.5e-15 85.5 140 44.3
Lalb_Chr06g0174141 Lupinus albus HOM05D006370 ORTHO05D008324 5.9e-15 85.1 169 40.2
FvH4_1g28570 Fragaria vesca HOM05D006370 ORTHO05D008324 7.7e-15 84.7 140 43.6
PGR142G0714 Punica granatum HOM05D006370 ORTHO05D008324 7.7e-15 84.7 156 42.3
Glyma.13G170200 Glycine max HOM05D006370 ORTHO05D008324 1.0e-14 84.3 152 40.8
TWI34G0169 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 1.0e-14 84.3 159 40.3
AUR62042155 Chenopodium quinoa HOM05D006370 ORTHO05D008324 2.2e-14 83.2 158 42.4
Sabra13G0056900 Salix brachista HOM05D006370 ORTHO05D008324 2.9e-14 82.8 148 40.5
SalBow4G2194 Salvia bowleyana HOM05D006370 ORTHO05D008324 2.9e-14 82.8 93 52.7
SalBow6G3000 Salvia bowleyana HOM05D006370 ORTHO05D008324 2.9e-14 82.8 93 52.7
PSO063G0933 Papaver somniferum HOM05D006370 ORTHO05D008324 5.0e-14 82.0 157 39.5
BcaB06g27082 Brassica carinata HOM05D006370 ORTHO05D008324 6.5e-14 81.6 159 39.0
Psat1g089760 Pisum sativum HOM05D006370 ORTHO05D008324 6.5e-14 81.6 149 41.6
PGSC0003DMG400028217 Solanum tuberosum HOM05D006370 ORTHO05D008324 8.5e-14 81.3 169 34.3
FAN19G0680 Fragaria x ananassa HOM05D006370 ORTHO05D008324 1.4e-13 80.5 162 38.9
MD14G1007700 Malus domestica HOM05D006370 ORTHO05D008324 1.4e-13 80.5 143 44.1
Nitab4.5_0000613g0010 Nicotiana tabacum HOM05D006370 ORTHO05D008324 1.4e-13 80.5 177 36.2
Sabra13G0057100 Salix brachista HOM05D006370 ORTHO05D008324 1.4e-13 80.5 148 39.9
BcaC02g09577 Brassica carinata HOM05D006370 ORTHO05D008324 1.9e-13 80.1 160 38.8
BolC4t26007H Brassica oleracea HOM05D006370 ORTHO05D008324 1.9e-13 80.1 160 38.8
CANSAT01G3230 Cannabis sativa HOM05D006370 ORTHO05D008324 1.9e-13 80.1 158 38.0
Solyc10g081480.2 Solanum lycopersicum HOM05D006370 ORTHO05D008324 1.9e-13 80.1 170 39.4
Sopen10g031990 Solanum pennellii HOM05D006370 ORTHO05D008324 1.9e-13 80.1 169 36.1
C04p44360 Brassica napus HOM05D006370 ORTHO05D008324 3.2e-13 79.3 160 39.4
RcHm_v2.0_Chr3g0496161 Rosa chinensis HOM05D006370 ORTHO05D008324 4.2e-13 79.0 170 36.5
A04p10640 Brassica napus HOM05D006370 ORTHO05D008324 5.5e-13 78.6 160 38.1
THA.LOC104823775 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 5.5e-13 78.6 160 40.6
Aa31LG9G17570 Aethionema arabicum HOM05D006370 ORTHO05D008324 7.2e-13 78.2 160 40.0
CARHR215460 Cardamine hirsuta HOM05D006370 ORTHO05D008324 7.2e-13 78.2 155 38.7
FAN28G0334 Fragaria x ananassa HOM05D006370 ORTHO05D008324 1.2e-12 77.4 162 38.3
Glyma.19G010300 Glycine max HOM05D006370 ORTHO05D008324 1.6e-12 77.0 153 37.3
Sp7g04690 Schrenkiella parvula HOM05D006370 ORTHO05D008324 2.1e-12 76.6 159 37.7
THA.LOC104800075 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 2.1e-12 76.6 161 39.8
THA.LOC104800403 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 2.1e-12 76.6 161 39.8
arahy.Tifrunner.gnm1.ann1.AZ5GA5 Arachis hypogaea HOM05D006370 ORTHO05D008324 3.6e-12 75.9 185 36.8
CDE10G0775 Ceratophyllum demersum HOM05D006370 ORTHO05D008324 6.1e-12 75.1 165 37.0
Gohir.A11G229500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 6.1e-12 75.1 155 36.8
Gohir.D11G241500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 1.0e-11 74.3 155 36.1
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 1.4e-11 73.9 165 35.8
Cpa.g.sc161.33 Carica papaya HOM05D006370 ORTHO05D008324 1.8e-11 73.6 167 38.3
Gorai.007G255600 Gossypium raimondii HOM05D006370 ORTHO05D008324 1.8e-11 73.6 155 34.8
Thhalv10028111m.g Eutrema salsugineum HOM05D006370 ORTHO05D008324 3.9e-11 72.4 167 36.5
Carub.0007s3265 Capsella rubella HOM05D006370 ORTHO05D008324 5.2e-11 72.0 155 39.4
arahy.Tifrunner.gnm1.ann1.ZL000T Arachis hypogaea HOM05D006370 ORTHO05D008324 1.1e-10 70.9 185 35.1
SEGI_24903 Sequoiadendron giganteum HOM05D006370 ORTHO05D008324 2.6e-10 69.7 154 35.1
Aqoxy1G00515 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 3.3e-10 69.3 78 53.8
Dinv05555 Davidia involucrata HOM05D006370 ORTHO05D008324 1.7e-09 67.0 90 47.8
Aqoxy1G00516 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 3.7e-09 65.9 88 47.7
Dinv25046 Davidia involucrata HOM05D006370 ORTHO05D008324 3.7e-09 65.9 90 46.7
Os03g0748600 Oryza sativa ssp. japonica HOM05D006370 ORTHO05D008324 4.8e-09 65.5 139 36.0
TAR633G0247 Trochodendron aralioides HOM05D001480 ORTHO05D001331 1.1e-08 64.3 67 56.7
Actinidia37817 Actinidia chinensis HOM05D006370 ORTHO05D008324 4.1e-08 62.4 89 44.9
Zm00001eb057190 Zea mays HOM05D006370 ORTHO05D008324 4.1e-08 62.4 151 31.1
Haze_20411 Corylus avellana HOM05D006370 ORTHO05D008324 1.6e-07 60.5 72 50.0
HPP92_022911 Vanilla planifolia HOM05D006370 ORTHO05D008324 7.7e-07 58.2 151 34.4
Prupe.7G012600 Prunus persica HOM05D006370 ORTHO05D008324 1.3e-06 57.4 68 51.5
Sc07g0007490 Simmondsia chinensis HOM05D006370 ORTHO05D008324 3.8e-06 55.8 85 42.4
Lsat_1_v5_gn_1_55401 Lactuca sativa HOM05D006370 ORTHO05D008324 8.5e-06 54.7 117 40.2


User provided reference genes

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