Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold66G22379 Striga asiatica HOM05D007489 ORTHO05D008037 0.0e+00 1405.6 826 100.0
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 8.0e-107 392.5 791 37.8
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.3e-88 332.0 904 36.2
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 2.2e-88 331.3 903 36.2
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 1.2e-46 192.6 919 27.5
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 1.0e-37 162.9 836 26.7
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 4.5e-33 147.5 856 25.2
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 1.9e-31 142.1 875 25.0
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 4.2e-31 141.0 853 27.7
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 7.2e-31 140.2 889 26.0
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 7.4e-28 130.2 880 25.9
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 9.7e-28 129.8 873 26.2
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 6.9e-26 123.6 845 27.3
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 1.3e-24 119.4 268 33.2
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 5.0e-24 117.5 894 26.2
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 5.0e-24 117.5 873 25.3
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 1.4e-23 115.9 867 23.1
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 1.9e-23 115.5 378 29.9
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 4.2e-23 114.4 835 24.4
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 1.6e-22 112.5 861 25.4
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 6.1e-22 110.5 325 30.5
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 1.4e-21 109.4 432 26.9
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 1.4e-21 109.4 919 22.7
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 3.0e-21 108.2 971 24.0
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 3.0e-21 108.2 894 23.0
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 1.1e-20 106.3 846 25.3
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 4.3e-20 104.4 839 23.0
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 4.3e-20 104.4 204 34.3
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 9.7e-20 103.2 164 40.2
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 2.8e-19 101.7 867 25.7
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 1.1e-18 99.8 886 22.5
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 1.2e-17 96.3 284 29.6
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 1.5e-17 95.9 859 23.4
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 1.7e-16 92.4 247 32.0
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 2.9e-16 91.7 834 23.3
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 5.0e-16 90.9 866 24.0
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 6.5e-16 90.5 845 25.9
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.1e-15 89.7 60 73.3
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 1.4e-15 89.4 844 26.4
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 4.2e-15 87.8 846 24.6
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 7.2e-15 87.0 847 24.4
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 9.4e-15 86.7 64 68.8
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 2.7e-14 85.1 848 23.6
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 7.9e-14 83.6 177 36.7
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 3.0e-13 81.6 58 67.2
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 3.0e-13 81.6 167 36.5
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 5.1e-13 80.9 576 26.9
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 6.7e-13 80.5 58 65.5
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 6.7e-13 80.5 286 29.0
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 8.8e-13 80.1 871 24.9
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 1.1e-12 79.7 58 63.8
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 1.5e-12 79.3 56 67.9
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 1.5e-12 79.3 878 23.9
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 1.5e-12 79.3 855 25.1
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 2.0e-12 79.0 58 60.3
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 2.0e-12 79.0 548 25.4
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 2.6e-12 78.6 825 22.1
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 4.4e-12 77.8 200 32.0
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 1.3e-11 76.3 405 27.7
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 1.7e-11 75.9 820 23.3
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 3.7e-11 74.7 949 23.3
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 4.8e-11 74.3 56 58.9
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.4e-10 72.8 882 25.7
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 5.3e-10 70.9 536 24.8
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 9.1e-10 70.1 857 25.1
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 4.5e-09 67.8 686 24.5
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 5.9e-09 67.4 904 24.3
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 7.7e-09 67.0 662 22.5
unitig_0.g132 Utricularia gibba HOM05D007489 ORTHO05D008037 7.7e-09 67.0 249 27.7
Lalb_Chr16g0384211 Lupinus albus HOM05D007489 ORTHO05D008037 1.3e-08 66.2 65 60.0
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.7e-08 65.9 875 25.9
PGR004G2208 Punica granatum HOM05D007489 ORTHO05D008037 3.8e-08 64.7 65 55.4
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 5.0e-08 64.3 868 22.9
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 8.5e-08 63.5 850 22.1
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 1.1e-07 63.2 862 21.0
COL.COLO4_31347 Corchorus olitorius HOM05D007489 ORTHO05D008037 1.5e-07 62.8 67 53.7
Aqoxy534s001 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 4.2e-07 61.2 65 50.8
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 4.2e-07 61.2 62 53.2
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 4.2e-07 61.2 65 55.4
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 4.2e-07 61.2 861 22.2
HPP92_008016 Vanilla planifolia HOM05D007489 ORTHO05D008037 4.2e-07 61.2 331 25.4
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 5.5e-07 60.8 879 26.1
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 7.2e-07 60.5 852 23.1
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 9.4e-07 60.1 686 23.6
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 9.4e-07 60.1 686 23.6
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 1.2e-06 59.7 831 21.2
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 3.6e-06 58.2 183 29.0
HPP92_007965 Vanilla planifolia HOM05D007489 ORTHO05D008037 3.6e-06 58.2 326 25.2


User provided reference genes

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