Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold66G22373 Striga asiatica HOM05D005516 ORTHO05D006713 1.2e-275 952.6 485 100.0
SGA_v2.0_scaffold69G23215 Striga asiatica HOM05D000039 ORTHO05D000370 4.5e-49 199.9 170 64.1
MSTRG.6254 Avicennia marina HOM05D005516 ORTHO05D006713 2.4e-34 151.0 115 68.7
Hund20711 Selenicereus undatus HOM05D005516 ORTHO05D006713 1.9e-31 141.4 114 63.2
Hund20712 Selenicereus undatus HOM05D005516 ORTHO05D006713 3.2e-31 140.6 147 54.4
Manes.08G152800 Manihot esculenta HOM05D005516 ORTHO05D006713 1.2e-30 138.7 99 70.7
Hma1.2p1_0526F.1_g172910 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 1.6e-30 138.3 103 68.9
COL.COLO4_20092 Corchorus olitorius HOM05D005516 ORTHO05D006713 2.7e-30 137.5 105 65.7
PSO384G4582 Papaver somniferum HOM05D005516 ORTHO05D006713 2.7e-30 137.5 97 67.0
PSO339G3932 Papaver somniferum HOM05D005516 ORTHO05D006713 4.6e-30 136.7 107 62.6
GSVIVG01029962001 Vitis vinifera HOM05D005516 ORTHO05D006713 4.6e-30 136.7 101 66.3
Cfa017721 Carpinus fangiana HOM05D005516 ORTHO05D006713 7.9e-30 136.0 103 67.0
CSS0039228 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 1.0e-29 135.6 108 62.0
FAN19G1175 Fragaria x ananassa HOM05D005516 ORTHO05D006713 1.0e-29 135.6 93 67.7
FAN23G0165 Fragaria x ananassa HOM05D005516 ORTHO05D006713 1.0e-29 135.6 92 68.5
Dinv13791 Davidia involucrata HOM05D005516 ORTHO05D006713 1.8e-29 134.8 103 66.0
FAN26G2397 Fragaria x ananassa HOM05D005516 ORTHO05D006713 1.8e-29 134.8 92 68.5
Gorai.013G196100 Gossypium raimondii HOM05D005516 ORTHO05D006713 1.8e-29 134.8 84 76.2
Hma1.2p1_0526F.1_g172920 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 1.8e-29 134.8 85 75.3
RcHm_v2.0_Chr3g0496031 Rosa chinensis HOM05D005516 ORTHO05D006713 1.8e-29 134.8 92 69.6
BcaB01g04919 Brassica carinata HOM05D005516 ORTHO05D006713 2.3e-29 134.4 93 64.5
Sp6g26410 Schrenkiella parvula HOM05D005516 ORTHO05D006713 3.0e-29 134.0 121 55.4
FvH4_1g29880 Fragaria vesca HOM05D005516 ORTHO05D006713 3.9e-29 133.7 92 67.4
Glyma.16G035800 Glycine max HOM05D005516 ORTHO05D006713 3.9e-29 133.7 105 63.8
ClCG04G004680 Citrullus lanatus HOM05D005516 ORTHO05D006713 6.7e-29 132.9 153 51.6
THA.LOC104820795 Tarenaya hassleriana HOM05D005516 ORTHO05D006713 8.8e-29 132.5 99 62.6
CiPaw.09G166400 Carya illinoinensis HOM05D005516 ORTHO05D006713 1.1e-28 132.1 102 65.7
Duzib128G1828 Durio zibethinus HOM05D005516 ORTHO05D006713 1.1e-28 132.1 99 65.7
AL6G28930 Arabidopsis lyrata HOM05D005516 ORTHO05D006713 1.5e-28 131.7 92 64.1
arahy.Tifrunner.gnm1.ann1.BMR428 Arachis hypogaea HOM05D005516 ORTHO05D006713 1.5e-28 131.7 88 69.3
Sabra13G0057700 Salix brachista HOM05D005516 ORTHO05D006713 1.5e-28 131.7 159 49.1
Sopen10g031880 Solanum pennellii HOM05D005516 ORTHO05D006713 1.5e-28 131.7 92 66.3
Hma1.2p1_0106F.1_g051205 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 2.0e-28 131.3 84 71.4
PGSC0003DMG400028211 Solanum tuberosum HOM05D005516 ORTHO05D006713 2.0e-28 131.3 89 67.4
Peaxi162Scf00575g00619 Petunia axillaris HOM05D005516 ORTHO05D006713 2.5e-28 131.0 95 63.2
A03p08520 Brassica napus HOM05D005516 ORTHO05D006713 3.3e-28 130.6 90 64.4
Oeu044207.1 Olea europaea HOM05D005516 ORTHO05D006713 4.3e-28 130.2 103 65.0
AUR62018088 Chenopodium quinoa HOM05D005516 ORTHO05D006713 5.7e-28 129.8 118 55.1
Duzib177G0157 Durio zibethinus HOM05D005516 ORTHO05D006713 5.7e-28 129.8 99 68.7
CARHR195330 Cardamine hirsuta HOM05D005516 ORTHO05D006713 7.4e-28 129.4 80 72.5
Duzib106G1703 Durio zibethinus HOM05D005516 ORTHO05D006713 7.4e-28 129.4 103 64.1
MD14G1009500 Malus domestica HOM05D005516 ORTHO05D006713 7.4e-28 129.4 99 61.6
CSS0003853 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 9.7e-28 129.0 91 68.1
MD12G1011900 Malus domestica HOM05D005516 ORTHO05D006713 9.7e-28 129.0 99 64.6
CAN.G128.137 Capsicum annuum HOM05D005516 ORTHO05D006713 1.3e-27 128.6 116 55.2
Prupe.7G015800 Prunus persica HOM05D005516 ORTHO05D006713 1.3e-27 128.6 112 60.7
Solyc10g081380.2 Solanum lycopersicum HOM05D005516 ORTHO05D006713 1.3e-27 128.6 100 63.0
BcaB01g05159 Brassica carinata HOM05D005516 ORTHO05D006713 1.7e-27 128.3 90 63.3
C03p09930 Brassica napus HOM05D005516 ORTHO05D006713 1.7e-27 128.3 90 63.3
BolC3t13481H Brassica oleracea HOM05D005516 ORTHO05D006713 1.7e-27 128.3 90 63.3
BraA03t10176Z Brassica rapa HOM05D005516 ORTHO05D006713 1.7e-27 128.3 90 63.3
Lalb_Chr14g0364851 Lupinus albus HOM05D005516 ORTHO05D006713 1.7e-27 128.3 96 63.5
Thecc.05G241500 Theobroma cacao HOM05D005516 ORTHO05D006713 2.2e-27 127.9 99 67.7
unitig_0.g583 Utricularia gibba HOM05D005516 ORTHO05D006713 2.2e-27 127.9 110 63.6
AT5G17840 Arabidopsis thaliana HOM05D005516 ORTHO05D006713 2.8e-27 127.5 96 62.5
Ca_08316_v3 Cicer arietinum L. HOM05D005516 ORTHO05D006713 2.8e-27 127.5 97 63.9
Thhalv10014907m.g Eutrema salsugineum HOM05D005516 ORTHO05D006713 2.8e-27 127.5 90 65.6
Rhsim08G0097500 Rhododendron simsii HOM05D005516 ORTHO05D006713 3.7e-27 127.1 104 67.3
vmacro08774 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 3.7e-27 127.1 103 63.1
CANSAT78G1214 Cannabis sativa HOM05D005516 ORTHO05D006713 4.8e-27 126.7 97 64.9
Cc06_g21500 Coffea canephora HOM05D005516 ORTHO05D006713 4.8e-27 126.7 85 67.1
Actinidia06205 Actinidia chinensis HOM05D005516 ORTHO05D006713 6.3e-27 126.3 99 63.6
C02p25840 Brassica napus HOM05D005516 ORTHO05D006713 6.3e-27 126.3 94 64.9
Eucgr.K01534 Eucalyptus grandis HOM05D005516 ORTHO05D006713 8.2e-27 125.9 100 62.0
Lsat_1_v5_gn_5_154420 Lactuca sativa HOM05D005516 ORTHO05D006713 8.2e-27 125.9 99 63.6
Potri.019G040400 Populus trichocarpa HOM05D005516 ORTHO05D006713 8.2e-27 125.9 109 60.6
Haze_20402 Corylus avellana HOM05D005516 ORTHO05D006713 1.1e-26 125.6 94 67.0
vmacro04358 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 1.4e-26 125.2 95 67.4
Carub.0006s1607 Capsella rubella HOM05D005516 ORTHO05D006713 1.8e-26 124.8 113 54.9
CsaV3_4G031610 Cucumis sativus L. HOM05D005516 ORTHO05D006713 1.8e-26 124.8 89 68.5
Sc07g0007460 Simmondsia chinensis HOM05D005516 ORTHO05D006713 1.8e-26 124.8 110 60.0
DCAR_016961 Daucus carota HOM05D005516 ORTHO05D006713 2.4e-26 124.4 85 67.1
Nitab4.5_0000613g0140 Nicotiana tabacum HOM05D005516 ORTHO05D006713 3.1e-26 124.0 95 61.1
Zm00001eb052720 Zea mays HOM05D005516 ORTHO05D006713 3.1e-26 124.0 99 65.7
Aa31LG11G11740 Aethionema arabicum HOM05D005516 ORTHO05D006713 4.1e-26 123.6 93 62.4
MSTRG.26204 Avicennia marina HOM05D005516 ORTHO05D006713 4.1e-26 123.6 116 58.6
CSS0031486 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 4.1e-26 123.6 91 68.1
HanXRQChr13g0406451 Helianthus annuus HOM05D005516 ORTHO05D006713 4.1e-26 123.6 92 66.3
QL07p017420 Quercus lobata HOM05D005516 ORTHO05D006713 4.1e-26 123.6 92 66.3
TPR.G34794 Trifolium pratense HOM05D005516 ORTHO05D006713 4.1e-26 123.6 78 73.1
vmacro18891 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 4.1e-26 123.6 95 66.3
Atru.chr2.1522 Acer truncatum HOM05D005516 ORTHO05D006713 5.3e-26 123.2 85 69.4
Ciclev10022543m.g Citrus clementina HOM05D005516 ORTHO05D006713 6.9e-26 122.9 94 64.9
MELO3C008865.2 Cucumis melo HOM05D005516 ORTHO05D006713 6.9e-26 122.9 83 69.9
Ah.13g074870 Amaranthus hybridus HOM05D005516 ORTHO05D006713 9.1e-26 122.5 125 52.0
Gorai.004G252300 Gossypium raimondii HOM05D005516 ORTHO05D006713 9.1e-26 122.5 93 67.7
Phvul.001G105600 Phaseolus vulgaris HOM05D005516 ORTHO05D006713 9.1e-26 122.5 93 64.5
AUR62032011 Chenopodium quinoa HOM05D005516 ORTHO05D006713 1.2e-25 122.1 128 51.6
Potri.013G066000 Populus trichocarpa HOM05D005516 ORTHO05D006713 1.5e-25 121.7 93 65.6
VMungo1383G1686 Vigna mungo HOM05D005516 ORTHO05D006713 1.5e-25 121.7 93 62.4
Psat3g086560 Pisum sativum HOM05D005516 ORTHO05D006713 2.0e-25 121.3 95 62.1
MBI05_g16554_MAGBIO Magnolia biondii HOM05D005516 ORTHO05D006713 2.6e-25 120.9 93 60.2
TWI60G0181 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 2.6e-25 120.9 77 74.0
Lj1g0004780 Lotus japonicus HOM05D005516 ORTHO05D006713 3.4e-25 120.6 103 63.1
Os03g0656201 Oryza sativa ssp. japonica HOM05D005516 ORTHO05D006713 4.5e-25 120.2 98 63.3
CDE07G0498 Ceratophyllum demersum HOM05D005516 ORTHO05D006713 5.9e-25 119.8 90 63.3
Gohir.A08G219566 Gossypium hirsutum HOM05D005516 ORTHO05D006713 5.9e-25 119.8 92 67.4
SEGI_32239 Sequoiadendron giganteum HOM05D005516 ORTHO05D006713 7.7e-25 119.4 100 59.0
Nitab4.5_0000811g0010 Nicotiana tabacum HOM05D005516 ORTHO05D006713 1.0e-24 119.0 93 60.2
arahy.Tifrunner.gnm1.ann1.253MNK Arachis hypogaea HOM05D005516 ORTHO05D006713 1.7e-24 118.2 84 66.7
Sed0005064 Sechium edule HOM05D005516 ORTHO05D006713 1.7e-24 118.2 83 66.3
HPP92_001001 Vanilla planifolia HOM05D005516 ORTHO05D006713 1.7e-24 118.2 94 61.7
TWI32G0326 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 2.2e-24 117.9 77 71.4
HPP92_000977 Vanilla planifolia HOM05D005516 ORTHO05D006713 2.2e-24 117.9 94 61.7
Glyma.19G117300 Glycine max HOM05D005516 ORTHO05D006713 2.9e-24 117.5 109 57.8
Medtr7g086700 Medicago truncatula HOM05D005516 ORTHO05D006713 6.5e-24 116.3 72 75.0
EL10Ac3g06621 Beta vulgaris HOM05D005516 ORTHO05D006713 8.5e-24 115.9 99 58.6
ECA248G2342 Erigeron canadensis HOM05D005516 ORTHO05D006713 1.1e-23 115.5 93 62.4
Nitab4.5_0000404g0040 Nicotiana tabacum HOM05D005516 ORTHO05D006713 1.9e-23 114.8 81 63.0
Zm00001eb218270 Zea mays HOM05D005516 ORTHO05D006713 2.5e-23 114.4 111 58.6
DCAR_020653 Daucus carota HOM05D005516 ORTHO05D006713 1.2e-22 112.1 91 61.5
Aqoxy1G00508 Aquilegia oxysepala HOM05D005516 ORTHO05D006713 3.9e-21 107.1 68 75.0
Cpa.g.sc161.38 Carica papaya HOM05D005516 ORTHO05D006713 5.1e-21 106.7 71 67.6
Gohir.A13G161100 Gossypium hirsutum HOM05D005516 ORTHO05D006713 5.1e-21 106.7 99 59.6
BcaB05g23282 Brassica carinata HOM05D005516 ORTHO05D006713 2.0e-20 104.8 94 57.4
Gohir.D13G166400 Gossypium hirsutum HOM05D005516 ORTHO05D006713 4.4e-20 103.6 92 59.8
Pp3c8_890 Physcomitrium patens HOM05D005516 ORTHO05D006713 2.8e-19 100.9 84 59.5
SalBow6G3354 Salvia bowleyana HOM05D005516 ORTHO05D006713 3.7e-19 100.5 114 55.3
Lalb_Chr24g0401101 Lupinus albus HOM05D005516 ORTHO05D006713 9.1e-18 95.9 62 72.6
Mapoly0020s0169 Marchantia polymorpha HOM05D005516 ORTHO05D006713 2.5e-15 87.8 98 44.9
Peaxi162Scf00575g00620 Petunia axillaris HOM05D005516 ORTHO05D006713 2.5e-15 87.8 90 50.0
Oeu029775.1 Olea europaea HOM05D005516 ORTHO05D006713 9.4e-15 85.9 79 57.0
Gohir.D02G044500 Gossypium hirsutum HOM05D005516 ORTHO05D006713 8.0e-14 82.8 62 59.7
Actinidia07963 Actinidia chinensis HOM05D005516 ORTHO05D006713 6.7e-13 79.7 75 57.3
BcaC03g15036 Brassica carinata HOM05D005516 ORTHO05D006713 6.7e-13 79.7 67 56.7
BolC2t08658H Brassica oleracea HOM05D005516 ORTHO05D006713 6.7e-13 79.7 67 56.7
Ciclev10013836m.g Citrus clementina HOM05D005516 ORTHO05D006713 1.5e-12 78.6 57 59.6
Gohir.A06G040900 Gossypium hirsutum HOM05D005516 ORTHO05D006713 5.7e-12 76.6 59 59.3
Gohir.D05G109301 Gossypium hirsutum HOM05D005516 ORTHO05D006713 5.7e-12 76.6 59 59.3
Sed0000674 Sechium edule HOM05D005516 ORTHO05D006713 3.7e-11 73.9 81 48.1
TAR633G1766 Trochodendron aralioides HOM05D005516 ORTHO05D006713 4.1e-10 70.5 44 70.5
CBR_g28089 Chara braunii HOM05D005516 ORTHO05D006713 3.5e-09 67.4 47 57.4
SMO367G1142 Selaginella moellendorffii HOM05D005516 ORTHO05D006713 3.2e-07 60.8 39 66.7


User provided reference genes

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