Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold66G22360 Striga asiatica HOM05D006326 ORTHO05D007589 4.2e-147 525.0 335 100.0
SGA_v2.0_scaffold66G22262 Striga asiatica HOM05D006326 ORTHO05D007589 1.7e-76 290.4 398 52.3
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 3.0e-68 263.1 250 65.2
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 9.9e-56 221.5 410 42.2
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 4.9e-47 192.6 427 37.5
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 5.1e-36 156.0 428 37.9
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 1.2e-29 134.8 69 100.0
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 3.6e-21 106.7 297 36.4
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 3.0e-20 103.6 426 29.6
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 3.9e-20 103.2 448 31.9
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 2.5e-19 100.5 464 28.4
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 2.5e-19 100.5 464 28.2
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 3.1e-17 93.6 290 33.4
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 3.1e-17 93.6 290 33.4
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 7.7e-16 89.0 331 33.8
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 7.7e-16 89.0 493 30.0
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 8.5e-15 85.5 331 32.9
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 4.2e-14 83.2 452 27.9
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 7.2e-14 82.4 477 30.0
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 9.4e-14 82.0 129 47.3
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 3.6e-13 80.1 261 33.0
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 2.3e-12 77.4 485 26.8
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.1e-11 75.1 475 33.1
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 3.3e-11 73.6 48 77.1
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 1.7e-10 71.2 499 25.7
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 3.7e-10 70.1 300 32.7
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 8.2e-10 68.9 394 37.6
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 4.1e-09 66.6 466 26.6
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 5.3e-09 66.2 272 31.6
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 7.0e-09 65.9 471 26.3
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.2e-08 65.1 393 38.2
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 1.5e-08 64.7 483 25.1
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 3.4e-08 63.5 292 34.2
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 1.7e-07 61.2 111 41.4
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 2.9e-07 60.5 49 67.3
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 3.8e-07 60.1 319 30.4
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 3.8e-07 60.1 405 27.7
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 3.8e-07 60.1 336 26.5
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 5.0e-07 59.7 53 64.2
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 8.5e-07 58.9 245 40.8
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 8.5e-07 58.9 244 31.1
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 1.9e-06 57.8 138 36.2
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 2.5e-06 57.4 88 47.7
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 3.2e-06 57.0 323 27.9
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 4.2e-06 56.6 473 24.3
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 4.2e-06 56.6 486 25.7
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 7.2e-06 55.8 63 50.8
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 9.4e-06 55.5 60 51.7
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 9.4e-06 55.5 53 60.4


User provided reference genes

Program Settings