Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 2.4e-84 315.5 160 100.0
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 4.2e-81 304.7 160 97.5
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 6.4e-53 211.1 137 81.0
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 1.6e-51 206.5 134 77.6
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 7.8e-51 204.1 137 75.2
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 3.1e-47 192.2 128 75.8
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 3.1e-47 192.2 136 74.3
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 4.0e-47 191.8 138 71.0
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 1.2e-46 190.3 128 75.8
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 4.4e-46 188.3 127 76.4
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 5.4e-44 181.4 129 75.2
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 4.3e-41 171.8 130 68.5
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 5.6e-41 171.4 122 76.2
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.2e-40 170.2 122 76.2
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 4.7e-40 168.3 117 72.6
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 6.2e-40 167.9 123 73.2
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.1e-39 167.2 117 71.8
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 1.8e-39 166.4 122 69.7
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 3.1e-39 165.6 137 65.0
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 3.1e-39 165.6 135 66.7
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 5.3e-39 164.9 119 73.1
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 5.3e-39 164.9 119 73.1
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.2e-38 163.7 117 70.1
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 1.2e-38 163.7 136 64.7
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 1.5e-38 163.3 117 72.6
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 1.5e-38 163.3 117 70.9
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 2.0e-38 162.9 118 72.0
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 3.4e-38 162.2 127 66.9
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 4.4e-38 161.8 117 70.1
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 4.4e-38 161.8 117 70.1
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 9.9e-38 160.6 158 62.0
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 1.3e-37 160.2 122 71.3
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 1.7e-37 159.8 124 65.3
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 2.9e-37 159.1 146 57.5
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 2.9e-37 159.1 117 69.2
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 3.8e-37 158.7 118 71.2
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 4.9e-37 158.3 123 68.3
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 4.9e-37 158.3 118 70.3
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 6.4e-37 157.9 122 67.2
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 8.4e-37 157.5 118 71.2
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 8.4e-37 157.5 118 71.2
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 1.4e-36 156.8 122 68.0
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 1.4e-36 156.8 116 71.6
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 1.4e-36 156.8 124 63.7
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 3.2e-36 155.6 134 59.7
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 3.2e-36 155.6 118 70.3
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 5.4e-36 154.8 122 65.6
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 7.1e-36 154.5 122 66.4
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 7.1e-36 154.5 122 66.4
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 9.3e-36 154.1 120 68.3
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 9.3e-36 154.1 130 64.6
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 2.1e-35 152.9 122 66.4
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 2.7e-35 152.5 120 67.5
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 3.5e-35 152.1 120 68.3
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 3.5e-35 152.1 125 67.2
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 7.8e-35 151.0 125 65.6
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 1.0e-34 150.6 122 67.2
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 2.3e-34 149.4 117 65.8
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 2.3e-34 149.4 125 66.4
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 1.5e-33 146.7 122 63.9
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.9e-33 146.4 147 59.9
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 2.5e-33 146.0 125 65.6
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 4.3e-33 145.2 146 58.2
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 4.3e-33 145.2 146 58.2
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 5.6e-33 144.8 115 67.0
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 7.3e-33 144.4 116 62.1
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 1.6e-32 143.3 134 60.4
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 1.6e-32 143.3 109 69.7
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 8.1e-32 141.0 168 51.8
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 1.1e-31 140.6 148 55.4
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 1.1e-31 140.6 133 58.6
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 1.2e-30 137.1 122 64.8
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 1.5e-30 136.7 92 72.8
SGA_v2.0_scaffold66G22360 Striga asiatica HOM05D006326 ORTHO05D007589 3.4e-30 135.6 69 100.0
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 1.3e-29 133.7 133 56.4
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 1.7e-29 133.3 123 59.3
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 6.4e-29 131.3 127 58.3
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 8.4e-29 131.0 121 59.5
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 1.4e-28 130.2 137 55.5
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 1.9e-28 129.8 149 53.0
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 4.6e-27 125.2 123 57.7
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 7.9e-27 124.4 81 76.5
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 1.0e-26 124.0 124 58.9
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 3.9e-26 122.1 81 71.6
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 1.1e-23 114.0 143 49.7
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 1.1e-23 114.0 143 49.7
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 1.1e-23 114.0 72 73.6
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 5.3e-23 111.7 90 66.7
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 9.0e-23 110.9 74 71.6
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 3.4e-22 109.0 72 70.8
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 3.4e-22 109.0 72 70.8
SGA_v2.0_scaffold66G22262 Striga asiatica HOM05D006326 ORTHO05D007589 5.8e-22 108.2 144 50.7
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 7.6e-22 107.8 72 75.0
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 9.9e-22 107.5 73 71.2
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 9.9e-22 107.5 73 71.2
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 1.7e-21 106.7 69 71.0
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 2.2e-21 106.3 74 73.0
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 2.2e-21 106.3 71 70.4
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 2.9e-21 105.9 91 61.5
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 8.4e-21 104.4 74 68.9
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 1.1e-20 104.0 93 59.1
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 1.9e-20 103.2 71 71.8
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 7.1e-20 101.3 72 66.7
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 1.2e-19 100.5 133 46.6
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 2.1e-19 99.8 73 67.1
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 2.7e-19 99.4 93 57.0
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 3.5e-19 99.0 74 70.3
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 4.6e-19 98.6 132 47.0
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 6.0e-19 98.2 73 64.4
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 1.5e-17 93.6 76 59.2
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 9.6e-17 90.9 112 46.4
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 4.8e-16 88.6 146 42.5
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 3.1e-15 85.9 75 60.0
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 1.2e-14 84.0 74 62.2
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 4.2e-12 75.5 63 60.3
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 2.8e-08 62.8 73 46.6
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 2.0e-06 56.6 107 36.4


User provided reference genes

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