Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 8.4e-172 607.1 338 100.0
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 1.6e-77 293.9 387 54.5
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 3.3e-67 259.6 383 47.5
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 1.6e-61 240.7 503 41.2
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 2.1e-58 230.3 369 42.0
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 1.0e-52 211.5 367 42.5
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 5.7e-51 205.7 482 38.6
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 5.9e-48 195.7 356 39.9
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 8.5e-47 191.8 358 40.8
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 4.6e-45 186.0 337 41.2
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 1.4e-41 174.5 364 37.1
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 9.1e-41 171.8 376 36.7
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 1.5e-40 171.0 344 38.4
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 4.5e-40 169.5 377 38.2
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 1.3e-39 167.9 344 37.8
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 2.9e-39 166.8 360 37.2
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 1.1e-38 164.9 340 38.2
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 2.5e-38 163.7 333 40.2
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 2.7e-37 160.2 368 35.1
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 4.7e-37 159.5 337 39.2
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 1.8e-36 157.5 344 37.5
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 1.8e-36 157.5 367 35.4
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 3.9e-36 156.4 373 33.8
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 4.4e-35 152.9 338 37.3
Nitab4.5_0002201g0030 Nicotiana tabacum HOM05D007667 ORTHO05D008033 9.7e-35 151.8 344 39.2
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 2.2e-34 150.6 364 36.3
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 4.8e-34 149.4 283 40.3
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 1.4e-33 147.9 345 35.7
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 1.4e-33 147.9 389 36.0
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 7.0e-33 145.6 405 34.6
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 7.0e-33 145.6 338 36.1
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 7.0e-33 145.6 307 37.1
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 3.5e-32 143.3 332 38.6
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 1.7e-31 141.0 339 35.7
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 1.2e-29 134.8 277 38.6
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 3.6e-29 133.3 307 34.5
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 1.2e-27 128.3 309 35.6
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 2.6e-27 127.1 468 31.2
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 3.3e-27 126.7 379 31.7
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 2.8e-26 123.6 383 32.6
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 6.3e-26 122.5 345 33.6
PGSC0003DMG400029088 Solanum tuberosum HOM05D007667 ORTHO05D008033 3.1e-25 120.2 317 33.1
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 4.1e-25 119.8 309 33.0
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 5.3e-25 119.4 339 30.1
Solyc08g067000.3 Solanum lycopersicum HOM05D007667 ORTHO05D008033 9.1e-25 118.6 344 31.4
EL10Ac3g07362 Beta vulgaris HOM05D007667 ORTHO05D008033 1.2e-24 118.2 351 32.5
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 2.0e-24 117.5 338 32.2
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 2.7e-24 117.1 367 33.5
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 3.8e-23 113.2 310 34.5
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 5.0e-23 112.8 351 32.5
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 1.5e-22 111.3 433 27.3
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 1.9e-22 110.9 379 31.4
Sopen08g020950 Solanum pennellii HOM05D007667 ORTHO05D008033 5.5e-22 109.4 334 31.4
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 7.2e-22 109.0 371 30.7
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 8.0e-21 105.5 426 30.3
Lj1A1064T35 Lonicera japonica HOM05D007667 ORTHO05D008033 3.0e-20 103.6 255 35.7
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 4.0e-20 103.2 189 37.6
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 5.2e-20 102.8 373 30.0
Dinv02787 Davidia involucrata HOM05D007667 ORTHO05D008033 8.8e-20 102.1 247 37.2
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 2.0e-19 100.9 423 27.2
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 5.7e-19 99.4 431 27.1
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 1.1e-17 95.1 247 33.6
Prupe.7G023900 Prunus persica HOM05D007667 ORTHO05D008033 1.8e-17 94.4 191 42.9
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 9.1e-17 92.0 256 30.9
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 1.3e-15 88.2 68 60.3
Nn7g37184 Nelumbo nucifera HOM05D007667 ORTHO05D001109 3.8e-15 86.7 225 37.8
Sed0023543 Sechium edule HOM05D007667 ORTHO05D008033 3.8e-15 86.7 317 32.2
unitig_744.g24157 Utricularia gibba HOM05D007667 ORTHO05D008033 6.5e-15 85.9 185 39.5
PSO384G0308 Papaver somniferum HOM05D007667 ORTHO05D008033 8.6e-15 85.5 454 25.1
Cfa010473 Carpinus fangiana HOM05D007667 ORTHO05D008033 1.9e-14 84.3 168 42.3
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 4.2e-14 83.2 358 26.5
PSO339G5815 Papaver somniferum HOM05D007667 ORTHO05D008033 7.2e-14 82.4 456 25.4
arahy.Tifrunner.gnm1.ann1.EU10QV Arachis hypogaea HOM05D007667 ORTHO05D008033 1.2e-13 81.6 160 41.9
Lalb_Chr22g0358171 Lupinus albus HOM05D007667 ORTHO05D008033 1.6e-13 81.3 184 37.5
CDE02G4005 Ceratophyllum demersum HOM05D000558 ORTHO05D008033 6.1e-13 79.3 251 29.9
arahy.Tifrunner.gnm1.ann1.8XR3F9 Arachis hypogaea HOM05D007667 ORTHO05D008033 8.0e-13 79.0 193 38.3
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 8.9e-12 75.5 327 24.5
Ca_08329_v3 Cicer arietinum L. HOM05D007667 ORTHO05D008033 4.4e-11 73.2 192 36.5
HPP92_012452 Vanilla planifolia HOM05D007667 ORTHO05D008033 1.3e-10 71.6 353 28.9
arahy.Tifrunner.gnm1.ann1.3W78Z9 Arachis hypogaea HOM05D007667 ORTHO05D008033 1.7e-10 71.2 155 40.6
AUR62020980 Chenopodium quinoa HOM05D007667 ORTHO05D008033 3.7e-10 70.1 128 36.7
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 2.4e-09 67.4 259 26.3
Dinv21555 Davidia involucrata HOM05D007667 ORTHO05D008033 2.4e-09 67.4 109 40.4
arahy.Tifrunner.gnm1.ann1.S7MPKE Arachis hypogaea HOM05D007667 ORTHO05D008033 7.0e-09 65.9 130 43.1
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 1.2e-08 65.1 237 26.2
arahy.Tifrunner.gnm1.ann1.NYTL45 Arachis hypogaea HOM05D007667 ORTHO05D008033 2.0e-08 64.3 89 48.3
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 4.5e-08 63.2 252 26.2
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 5.9e-08 62.8 252 25.8
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 5.9e-08 62.8 250 25.6
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 5.9e-08 62.8 252 25.8
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 5.9e-08 62.8 250 25.6
ATR1096G118 Amborella trichopoda HOM05D007667 ORTHO05D008033 7.8e-08 62.4 416 26.2
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 7.8e-08 62.4 78 53.8
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 1.3e-07 61.6 246 23.6
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 1.7e-07 61.2 232 25.9
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 2.3e-07 60.8 237 25.7
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 3.8e-07 60.1 89 34.8
MBI13_g31583_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 3.8e-07 60.1 82 50.0
arahy.Tifrunner.gnm1.ann1.48UEJW Arachis hypogaea HOM05D007667 ORTHO05D008033 5.0e-07 59.7 89 48.3
arahy.Tifrunner.gnm1.ann1.W45WAC Arachis hypogaea HOM05D007667 ORTHO05D008033 5.0e-07 59.7 130 41.5
Actinidia37860 Actinidia chinensis HOM05D007667 ORTHO05D008033 6.6e-07 59.3 342 24.9
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 6.6e-07 59.3 232 25.4
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 1.9e-06 57.8 246 24.8
Cpa.g.sc33.176 Carica papaya HOM05D007667 ORTHO05D008033 1.9e-06 57.8 164 34.1
arahy.Tifrunner.gnm1.ann1.8931ZB Arachis hypogaea HOM05D007667 ORTHO05D008033 2.5e-06 57.4 127 38.6
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 2.5e-06 57.4 241 25.3
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 3.3e-06 57.0 301 24.6
MBI13_g08646_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 4.3e-06 56.6 66 40.9
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 5.6e-06 56.2 352 21.9
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 9.5e-06 55.5 258 23.6
Carub.0005s2354 Capsella rubella HOM05D009749 ORTHO05D008033 9.5e-06 55.5 249 26.1
MELO3C019169.2 Cucumis melo HOM05D007667 ORTHO05D008033 9.5e-06 55.5 76 36.8


User provided reference genes

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