Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold66G22262 Striga asiatica HOM05D006326 ORTHO05D007589 2.2e-236 822.0 448 100.0
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 9.1e-81 305.1 445 48.1
SGA_v2.0_scaffold66G22360 Striga asiatica HOM05D006326 ORTHO05D007589 6.1e-77 292.4 398 52.3
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 3.8e-71 273.1 455 43.3
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 1.8e-60 237.7 298 54.0
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 1.3e-55 221.5 459 40.1
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 1.5e-43 181.4 354 42.4
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 5.4e-41 172.9 493 34.5
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 7.8e-40 169.1 465 35.3
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 5.6e-38 162.9 469 34.5
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 5.6e-38 162.9 469 34.3
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 1.1e-36 158.7 517 34.0
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 5.4e-33 146.4 496 32.5
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 1.2e-32 145.2 486 32.3
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.6e-29 134.8 509 32.0
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 4.0e-28 130.2 516 30.8
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 6.8e-28 129.4 500 32.0
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.3e-26 125.2 491 30.8
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.3e-26 125.2 479 31.5
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 4.2e-25 120.2 498 31.5
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 9.3e-25 119.0 524 30.3
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 4.3e-22 110.2 506 27.7
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 1.3e-21 108.6 144 50.7
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 1.3e-21 108.6 526 29.3
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 4.8e-21 106.7 488 29.5
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 6.2e-21 106.3 510 30.4
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 1.8e-20 104.8 395 32.4
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 5.3e-20 103.2 268 35.8
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 5.3e-20 103.2 268 35.8
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 2.0e-19 101.3 388 32.5
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 3.4e-19 100.5 496 28.6
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 5.8e-19 99.8 492 29.3
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 1.7e-18 98.2 531 29.4
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 8.4e-18 95.9 492 29.3
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 1.9e-17 94.7 515 29.1
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 3.5e-16 90.5 145 43.4
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 3.9e-15 87.0 396 30.3
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 6.6e-15 86.3 522 28.0
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.1e-14 85.5 283 31.8
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 5.6e-14 83.2 388 30.2
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 9.6e-14 82.4 505 27.3
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 1.6e-13 81.6 497 27.6
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 2.1e-13 81.3 506 26.9
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 2.1e-13 81.3 458 27.5
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 2.1e-13 81.3 453 26.5
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 2.1e-13 81.3 411 26.5
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 3.6e-13 80.5 474 26.4
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 2.4e-12 77.8 473 25.8
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 5.3e-12 76.6 382 27.5
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 9.0e-12 75.9 408 26.2
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 9.0e-12 75.9 271 30.6
SGA_v2.0_scaffold34G13844 Striga asiatica HOM05D000083 ORTHO05D000196 1.5e-11 75.1 102 47.1
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 7.6e-11 72.8 497 27.0
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 7.6e-11 72.8 416 27.9
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 1.3e-10 72.0 462 27.3
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 3.8e-10 70.5 475 26.1
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 6.4e-10 69.7 440 28.6
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 8.4e-10 69.3 367 29.4
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.4e-09 68.6 425 28.5
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 1.4e-09 68.6 502 25.7
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 5.4e-09 66.6 431 26.7
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 5.4e-09 66.6 441 28.6
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.2e-08 65.5 66 57.6
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 1.6e-08 65.1 255 32.9
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.6e-08 65.1 493 25.2
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 1.6e-08 65.1 482 26.1
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 1.6e-08 65.1 482 26.1
SGA_v2.0_scaffold70G23402 Striga asiatica HOM05D000083 ORTHO05D000196 2.7e-08 64.3 103 42.7
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 3.5e-08 63.9 478 25.7
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 4.6e-08 63.5 471 26.8
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 4.6e-08 63.5 501 27.3
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 6.0e-08 63.2 383 26.1
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 1.0e-07 62.4 317 30.9
Glyma.13G309900 Glycine max HOM05D000083 ORTHO05D000196 1.8e-07 61.6 95 41.1
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 3.9e-07 60.5 251 31.5
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 5.1e-07 60.1 459 27.0
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 5.1e-07 60.1 414 28.0
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 6.7e-07 59.7 67 55.2
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 8.7e-07 59.3 434 26.7
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 8.7e-07 59.3 444 27.7
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 1.1e-06 58.9 63 55.6
Glyma.12G192500 Glycine max HOM05D000083 ORTHO05D000196 1.5e-06 58.5 77 44.2
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 1.5e-06 58.5 59 54.2
Eucgr.A01110 Eucalyptus grandis HOM05D000083 ORTHO05D000196 2.5e-06 57.8 87 40.2
Medtr4g049730 Medicago truncatula HOM05D000083 ORTHO05D000196 2.5e-06 57.8 65 47.7
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 4.3e-06 57.0 178 30.9
Migut.M00472 Erythranthe guttata HOM05D000083 ORTHO05D000196 4.3e-06 57.0 38 68.4
Glyma.12G097200 Glycine max HOM05D000083 ORTHO05D000196 4.3e-06 57.0 133 31.6
Manes.12G072900 Manihot esculenta HOM05D000083 ORTHO05D000196 4.3e-06 57.0 52 57.7
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 5.6e-06 56.6 429 26.8
RcHm_v2.0_Chr2g0158821 Rosa chinensis HOM05D000083 ORTHO05D000196 5.6e-06 56.6 67 52.2
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 7.4e-06 56.2 390 27.2
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 7.4e-06 56.2 65 53.8
Ca_19498_v3 Cicer arietinum L. HOM05D000083 ORTHO05D000196 9.6e-06 55.8 70 45.7
MELO3C019290.2 Cucumis melo HOM05D000083 ORTHO05D000196 9.6e-06 55.8 40 67.5
Manes.13G068022 Manihot esculenta HOM05D000083 ORTHO05D000196 9.6e-06 55.8 52 53.8
QL08p032214 Quercus lobata HOM05D000083 ORTHO05D000196 9.6e-06 55.8 66 51.5


User provided reference genes

Program Settings