Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold668G53415 Striga asiatica HOM05D002727 ORTHO05D002856 4.7e-177 624.4 308 100.0
SGA_v2.0_scaffold122G33196 Striga asiatica HOM05D002727 ORTHO05D002856 3.6e-76 289.3 253 66.0
SGA_v2.0_scaffold170G38831 Striga asiatica HOM05D002727 ORTHO05D002856 1.0e-75 287.7 269 62.1
Migut.E00413 Erythranthe guttata HOM05D002727 ORTHO05D002856 9.8e-42 174.9 221 49.3
SGA_v2.0_scaffold180G39653 Striga asiatica HOM05D000089 ORTHO05D000104 6.3e-41 172.2 215 54.9
SGA_v2.0_scaffold7G03723 Striga asiatica HOM05D002727 ORTHO05D002856 7.7e-39 165.2 120 75.8
Oeu044348.1 Olea europaea HOM05D002727 ORTHO05D002856 1.0e-38 164.9 272 41.2
SGA_v2.0_scaffold172G38950 Striga asiatica HOM05D002727 ORTHO05D002856 1.4e-35 154.5 218 50.9
Solyc05g008320.1 Solanum lycopersicum HOM05D002727 ORTHO05D002856 1.5e-29 134.4 214 40.7
Sopen05g004150 Solanum pennellii HOM05D002727 ORTHO05D002856 1.5e-29 134.4 214 40.7
PGSC0003DMG400030506 Solanum tuberosum HOM05D002727 ORTHO05D002856 1.5e-29 134.4 214 40.7
CAN.G185.21 Capsicum annuum HOM05D002727 ORTHO05D002856 8.9e-27 125.2 282 34.0
Peaxi162Scf00205g00023 Petunia axillaris HOM05D002727 ORTHO05D002856 1.3e-25 121.3 214 38.8
Nitab4.5_0006134g0020 Nicotiana tabacum HOM05D002727 ORTHO05D002856 1.7e-25 120.9 218 39.0
SGA_v2.0_scaffold44G16740 Striga asiatica HOM05D002727 ORTHO05D002856 1.4e-24 117.9 77 83.1
SGA_v2.0_scaffold76G25158 Striga asiatica HOM05D002727 ORTHO05D002856 4.1e-24 116.3 77 83.1
SGA_v2.0_scaffold52G19078 Striga asiatica HOM05D002727 ORTHO05D002856 3.5e-23 113.2 72 88.9
SGA_v2.0_scaffold190G40405 Striga asiatica HOM05D002727 ORTHO05D002856 4.6e-23 112.8 61 96.7
SGA_v2.0_scaffold495G52461 Striga asiatica HOM05D002727 ORTHO05D002856 1.2e-20 104.8 72 80.6
SGA_v2.0_scaffold192G40538 Striga asiatica HOM05D001081 ORTHO05D004708 4.7e-20 102.8 77 76.6
Lsat_1_v5_gn_8_43200 Lactuca sativa HOM05D002727 ORTHO05D002856 4.4e-18 96.3 213 33.3
DCAR_007283 Daucus carota HOM05D002727 ORTHO05D002856 6.4e-17 92.4 217 30.4
Hma1.2p1_0114F.1_g055280 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 6.4e-17 92.4 209 30.6
Atru.chr11.374 Acer truncatum HOM05D002727 ORTHO05D002856 2.4e-16 90.5 272 29.0
Hma1.2p1_0951F.1_g240760 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 2.4e-16 90.5 217 30.4
Hma1.2p1_2764F.1_g328145 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 2.4e-16 90.5 217 30.4
QL01p002288 Quercus lobata HOM05D002727 ORTHO05D002856 2.4e-16 90.5 204 28.4
CSS0022209 Camellia sinensis var. sinensis HOM05D002727 ORTHO05D002856 4.1e-16 89.7 278 28.1
Actinidia15249 Actinidia chinensis HOM05D002727 ORTHO05D002856 2.1e-15 87.4 217 29.5
HanXRQChr08g0212641 Helianthus annuus HOM05D002727 ORTHO05D002856 3.5e-15 86.7 213 31.5
HanXRQChr15g0488631 Helianthus annuus HOM05D002727 ORTHO05D002856 6.0e-15 85.9 268 28.0
Actinidia36683 Actinidia chinensis HOM05D002727 ORTHO05D002856 1.3e-14 84.7 217 27.6
MELO3C012299.2 Cucumis melo HOM05D002727 ORTHO05D002856 1.3e-14 84.7 205 28.8
Thecc.02G278300 Theobroma cacao HOM05D002727 ORTHO05D002856 1.7e-14 84.3 213 28.6
Potri.008G127500 Populus trichocarpa HOM05D002727 ORTHO05D002856 3.9e-14 83.2 179 30.7
TAR622G1289 Trochodendron aralioides HOM05D002727 ORTHO05D002856 3.9e-14 83.2 220 26.8
Ciclev10017676m.g Citrus clementina HOM05D002727 ORTHO05D002856 6.6e-14 82.4 224 27.7
Duzib251G0433 Durio zibethinus HOM05D002727 ORTHO05D002856 1.1e-13 81.6 213 29.1
Sabra08G0096300 Salix brachista HOM05D002727 ORTHO05D002856 1.9e-13 80.9 201 27.4
Sabra08G0096800 Salix brachista HOM05D002727 ORTHO05D002856 1.9e-13 80.9 222 27.9
DCAR_023615 Daucus carota HOM05D002727 ORTHO05D002856 2.5e-13 80.5 223 25.1
Dinv16190 Davidia involucrata HOM05D002727 ORTHO05D002856 2.5e-13 80.5 221 27.6
SGA_v2.0_scaffold10G05490 Striga asiatica HOM05D002727 ORTHO05D002856 4.3e-13 79.7 55 83.6
Nn3g16463 Nelumbo nucifera HOM05D002727 ORTHO05D002856 5.6e-13 79.3 242 26.4
Potri.008G128200 Populus trichocarpa HOM05D002727 ORTHO05D002856 9.5e-13 78.6 211 26.1
VMungo0720G2475 Vigna mungo HOM05D002727 ORTHO05D002856 9.5e-13 78.6 213 27.2
ECA232G4731 Erigeron canadensis HOM05D002727 ORTHO05D002856 1.6e-12 77.8 222 28.8
unitig_27.g25263 Utricularia gibba HOM05D002727 ORTHO05D002856 1.6e-12 77.8 77 57.1
CsaV3_5G034890 Cucumis sativus L. HOM05D002727 ORTHO05D002856 2.1e-12 77.4 205 27.3
Ciclev10017720m.g Citrus clementina HOM05D002727 ORTHO05D002856 3.6e-12 76.6 226 26.1
Haze_11036 Corylus avellana HOM05D002727 ORTHO05D002856 3.6e-12 76.6 217 26.3
Lj5g0017764 Lotus japonicus HOM05D002727 ORTHO05D002856 3.6e-12 76.6 213 28.6
Glyma.10G265700 Glycine max HOM05D002727 ORTHO05D002856 4.7e-12 76.3 213 26.3
Manes.17G075200 Manihot esculenta HOM05D002727 ORTHO05D002856 4.7e-12 76.3 213 26.3
Glyma.09G119800 Glycine max HOM05D002727 ORTHO05D002856 6.2e-12 75.9 212 26.9
Sed0008746 Sechium edule HOM05D002727 ORTHO05D002856 6.2e-12 75.9 210 25.7
vmacro10627 Vaccinium macrocarpon HOM05D002727 ORTHO05D002856 6.2e-12 75.9 227 26.9
arahy.Tifrunner.gnm1.ann1.NZR7KS Arachis hypogaea HOM05D002727 ORTHO05D002856 8.1e-12 75.5 215 26.0
Eucgr.G02210 Eucalyptus grandis HOM05D002727 ORTHO05D002856 8.1e-12 75.5 233 28.3
Lsat_1_v5_gn_3_54560 Lactuca sativa HOM05D002727 ORTHO05D002856 8.1e-12 75.5 212 28.3
TPR.G24442 Trifolium pratense HOM05D002727 ORTHO05D002856 8.1e-12 75.5 248 26.6
SGA_v2.0_scaffold85G26696 Striga asiatica HOM05D002727 ORTHO05D002856 1.1e-11 75.1 81 65.4
Lalb_Chr17g0338701 Lupinus albus HOM05D002727 ORTHO05D002856 1.4e-11 74.7 231 23.4
MD13G1026900 Malus domestica HOM05D002727 ORTHO05D002856 1.8e-11 74.3 223 26.5
Phvul.007G037300 Phaseolus vulgaris HOM05D002727 ORTHO05D002856 2.3e-11 73.9 210 26.2
VMungo0720G0381 Vigna mungo HOM05D002727 ORTHO05D002856 3.1e-11 73.6 213 27.7
arahy.Tifrunner.gnm1.ann1.E5JI7C Arachis hypogaea HOM05D002727 ORTHO05D002856 4.0e-11 73.2 215 26.0
ECA233G4969 Erigeron canadensis HOM05D002727 ORTHO05D002856 4.0e-11 73.2 264 27.3
Cfa008577 Carpinus fangiana HOM05D002727 ORTHO05D002856 5.2e-11 72.8 214 26.2
Dinv05150 Davidia involucrata HOM05D002727 ORTHO05D002856 5.2e-11 72.8 246 24.8
ClCG05G022230 Citrullus lanatus HOM05D002727 ORTHO05D002856 6.8e-11 72.4 205 26.8
Ca_24568_v3 Cicer arietinum L. HOM05D002727 ORTHO05D002856 1.2e-10 71.6 258 24.8
Glyma.20G124900 Glycine max HOM05D002727 ORTHO05D002856 1.2e-10 71.6 213 25.4
Eucgr.G02206 Eucalyptus grandis HOM05D002727 ORTHO05D002856 1.5e-10 71.2 223 28.3
Thecc.02G279300 Theobroma cacao HOM05D002727 ORTHO05D002856 1.5e-10 71.2 204 27.5
Aqoxy1G00996 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 2.0e-10 70.9 207 29.0
CANSAT01G3036 Cannabis sativa HOM05D002727 ORTHO05D002856 2.0e-10 70.9 233 27.0
CDE04G0093 Ceratophyllum demersum HOM05D002727 ORTHO05D002856 2.0e-10 70.9 217 27.2
Ca_11101_v3 Cicer arietinum L. HOM05D002727 ORTHO05D002856 2.0e-10 70.9 217 25.3
Lalb_Chr21g0308511 Lupinus albus HOM05D002727 ORTHO05D002856 2.0e-10 70.9 213 25.8
Aqoxy2G00907 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 2.6e-10 70.5 212 26.9
PGR102G0802 Punica granatum HOM05D002727 ORTHO05D002856 5.8e-10 69.3 246 24.0
Rhsim09G0100100 Rhododendron simsii HOM05D008460 ORTHO05D001602 5.8e-10 69.3 87 47.1
FvH4_7g12190 Fragaria vesca HOM05D002727 ORTHO05D002856 7.5e-10 68.9 213 24.4
FAN02G0051 Fragaria x ananassa HOM05D002727 ORTHO05D002856 7.5e-10 68.9 234 26.1
FAN05G5197 Fragaria x ananassa HOM05D002727 ORTHO05D002856 7.5e-10 68.9 235 26.4
FAN06G2836 Fragaria x ananassa HOM05D002727 ORTHO05D002856 7.5e-10 68.9 213 24.4
FvH4_4g32150 Fragaria vesca HOM05D002727 ORTHO05D002856 9.9e-10 68.6 217 25.3
FAN15G1981 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.3e-09 68.2 222 25.2
FAN20G2548 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.3e-09 68.2 222 24.8
unitig_26.g9074 Utricularia gibba HOM05D002727 ORTHO05D002856 1.3e-09 68.2 77 53.2
FAN22G0940 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.7e-09 67.8 217 25.3
FAN27G2751 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.7e-09 67.8 222 24.3
Psat6g221920 Pisum sativum HOM05D002727 ORTHO05D002856 1.7e-09 67.8 213 26.8
MELO3C005314.2 Cucumis melo HOM05D002727 ORTHO05D002856 2.2e-09 67.4 201 23.4
FvH4_2g32760 Fragaria vesca HOM05D002727 ORTHO05D002856 2.2e-09 67.4 222 25.2
FAN05G5380 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.2e-09 67.4 236 26.3
FAN14G2593 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.2e-09 67.4 236 26.3
FAN24G3357 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.2e-09 67.4 221 24.9
FAN12G1004 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.9e-09 67.0 217 24.9
ClCG01G006130 Citrullus lanatus HOM05D002727 ORTHO05D002856 6.4e-09 65.9 207 25.6
arahy.Tifrunner.gnm1.ann1.AV0RHQ Arachis hypogaea HOM05D002727 ORTHO05D002856 8.3e-09 65.5 243 22.6
FAN07G1376 Fragaria x ananassa HOM05D002727 ORTHO05D002856 8.3e-09 65.5 220 25.0
Manes.14G135600 Manihot esculenta HOM05D002727 ORTHO05D002856 8.3e-09 65.5 213 25.4
Atru.chr6.2573 Acer truncatum HOM05D002727 ORTHO05D002856 1.1e-08 65.1 222 23.4
arahy.Tifrunner.gnm1.ann1.PT8N4B Arachis hypogaea HOM05D002727 ORTHO05D002856 1.1e-08 65.1 243 23.0
Prupe.1G322000 Prunus persica HOM05D002727 ORTHO05D002856 1.1e-08 65.1 222 26.6
Psat2g129760 Pisum sativum HOM05D002727 ORTHO05D002856 1.4e-08 64.7 228 24.6
SGA_v2.0_scaffold156G37293 Striga asiatica HOM05D002727 ORTHO05D400589 1.4e-08 64.7 46 67.4
RcHm_v2.0_Chr4g0440841 Rosa chinensis HOM05D002727 ORTHO05D002856 1.9e-08 64.3 222 25.7
unitig_26.g9076 Utricularia gibba HOM05D002727 ORTHO05D002856 3.2e-08 63.5 77 51.9
TWI56G0192 Tripterygium wilfordii HOM05D002727 ORTHO05D002856 4.1e-08 63.2 218 23.9
Oeu019229.1 Olea europaea HOM05D034535 ORTHO05D002856 5.4e-08 62.8 54 53.7
MD13G1028200 Malus domestica HOM05D002727 ORTHO05D002856 7.1e-08 62.4 224 24.6
CsaV3_5G028530 Cucumis sativus L. HOM05D002727 ORTHO05D002856 9.2e-08 62.0 263 23.2
Sed0024961 Sechium edule HOM05D002727 ORTHO05D002856 9.2e-08 62.0 252 22.2
FAN09G3462 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.1e-07 60.8 223 25.6
Lalb_Chr24g0403301 Lupinus albus HOM05D002727 ORTHO05D002856 2.1e-07 60.8 182 27.5
THA.LOC104824147 Tarenaya hassleriana HOM05D002727 ORTHO05D002856 2.1e-07 60.8 213 25.4
Medtr1g108470 Medicago truncatula HOM05D002727 ORTHO05D002856 2.7e-07 60.5 73 38.4
SGA_v2.0_scaffold164G38164 Striga asiatica HOM05D002727 ORTHO05D400339 2.7e-07 60.5 50 62.0
Medtr5g044170 Medicago truncatula HOM05D002727 ORTHO05D002856 3.5e-07 60.1 244 24.2
COL.COLO4_20450 Corchorus olitorius HOM05D002727 ORTHO05D002856 4.6e-07 59.7 80 33.8
MD16G1031100 Malus domestica HOM05D002727 ORTHO05D002856 4.6e-07 59.7 226 24.3
arahy.Tifrunner.gnm1.ann1.L56H08 Arachis hypogaea HOM05D002727 ORTHO05D002856 6.0e-07 59.3 195 27.7
FAN03G1798 Fragaria x ananassa HOM05D002727 ORTHO05D002856 7.8e-07 58.9 217 22.1
SGA_v2.0_scaffold53G19439 Striga asiatica HOM05D002727 ORTHO05D404013 1.3e-06 58.2 60 56.7
PSO478G1911 Papaver somniferum HOM05D002727 ORTHO05D002856 1.7e-06 57.8 223 27.8
PGR119G0434 Punica granatum HOM05D002727 ORTHO05D002856 1.7e-06 57.8 78 33.3
FAN07G1475 Fragaria x ananassa HOM05D005453 ORTHO05D006520 2.3e-06 57.4 158 27.2
QL01p002083 Quercus lobata HOM05D002727 ORTHO05D002856 2.3e-06 57.4 221 22.6
FAN10G0099 Fragaria x ananassa HOM05D000147 ORTHO05D007841 3.0e-06 57.0 211 22.3
MD16G1030000 Malus domestica HOM05D002727 ORTHO05D002856 3.9e-06 56.6 75 34.7
Ah.02g128090 Amaranthus hybridus HOM05D002727 ORTHO05D002856 6.6e-06 55.8 201 22.9
arahy.Tifrunner.gnm1.ann1.A4HJXM Arachis hypogaea HOM05D002727 ORTHO05D002856 6.6e-06 55.8 195 26.7
Cpa.g.sc65.111 Carica papaya HOM05D002727 ORTHO05D002856 6.6e-06 55.8 76 28.9
CiPaw.06G012900 Carya illinoinensis HOM05D002727 ORTHO05D002856 6.6e-06 55.8 211 23.2
FAN07G0027 Fragaria x ananassa HOM05D002727 ORTHO05D002856 8.6e-06 55.5 247 26.7
QL02p071341 Quercus lobata HOM05D002727 ORTHO05D002856 8.6e-06 55.5 213 21.6


User provided reference genes

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