Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold65G22147 Striga asiatica HOM05D005481 ORTHO05D006779 2.4e-252 875.2 489 100.0
SalBow2G3020 Salvia bowleyana HOM05D005481 ORTHO05D006779 3.8e-157 558.9 494 69.4
MSTRG.13650 Avicennia marina HOM05D005481 ORTHO05D006779 3.2e-148 529.3 443 70.9
Migut.E00569 Erythranthe guttata HOM05D005481 ORTHO05D006779 5.0e-141 505.4 498 69.9
unitig_22.g5612 Utricularia gibba HOM05D005481 ORTHO05D006779 4.7e-123 445.7 500 59.4
Hma1.2p1_0095F.1_g047500 Hydrangea macrophylla HOM05D005481 ORTHO05D006779 1.4e-122 444.1 463 62.2
Actinidia20106 Actinidia chinensis HOM05D005481 ORTHO05D006779 7.5e-121 438.3 467 60.2
Cc11_g05700 Coffea canephora HOM05D005481 ORTHO05D006779 6.4e-120 435.3 454 63.4
Sopen04g003490 Solanum pennellii HOM05D005481 ORTHO05D006779 1.4e-119 434.1 468 64.3
Solyc04g008340.2 Solanum lycopersicum HOM05D005481 ORTHO05D006779 1.2e-118 431.0 465 64.1
GSVIVG01011593001 Vitis vinifera HOM05D005481 ORTHO05D006779 4.6e-118 429.1 488 60.2
CSS0011982 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 6.0e-118 428.7 499 57.9
CSS0010274 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 2.3e-117 426.8 505 57.8
Gohir.A12G153800 Gossypium hirsutum HOM05D005481 ORTHO05D006779 3.3e-116 422.9 479 59.5
CiPaw.05G158800 Carya illinoinensis HOM05D005481 ORTHO05D006779 4.3e-116 422.5 432 61.6
Actinidia37496 Actinidia chinensis HOM05D005481 ORTHO05D006779 7.3e-116 421.8 492 57.1
Dinv20536 Davidia involucrata HOM05D005481 ORTHO05D006779 1.2e-115 421.0 506 58.5
PSO063G6983 Papaver somniferum HOM05D005481 ORTHO05D006779 8.1e-115 418.3 432 61.6
TWI77G0967 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 1.1e-114 417.9 438 63.7
PSO782G1235 Papaver somniferum HOM05D005481 ORTHO05D006779 1.4e-114 417.5 426 62.7
TPR.G11925 Trifolium pratense HOM05D005481 ORTHO05D006779 1.4e-114 417.5 431 63.6
Gohir.D12G156900 Gossypium hirsutum HOM05D005481 ORTHO05D006779 4.0e-114 416.0 431 61.5
Gorai.008G169700 Gossypium raimondii HOM05D005481 ORTHO05D006779 8.9e-114 414.8 441 60.8
Potri.008G139900 Populus trichocarpa HOM05D005481 ORTHO05D006779 8.9e-114 414.8 428 60.3
COL.COLO4_27578 Corchorus olitorius HOM05D005481 ORTHO05D006779 1.2e-113 414.5 429 61.8
Lj4g0017847 Lotus japonicus HOM05D005481 ORTHO05D006779 2.0e-113 413.7 428 63.3
RcHm_v2.0_Chr4g0433701 Rosa chinensis HOM05D005481 ORTHO05D006779 2.6e-113 413.3 429 61.8
Glyma.05G137400 Glycine max HOM05D005481 ORTHO05D006779 4.4e-113 412.5 431 62.4
CAN.G966.8 Capsicum annuum HOM05D005481 ORTHO05D006779 2.2e-112 410.2 477 61.4
Aqoxy3G04008 Aquilegia oxysepala HOM05D005481 ORTHO05D006779 6.4e-112 408.7 461 57.7
Glyma.08G092700 Glycine max HOM05D005481 ORTHO05D006779 1.9e-111 407.1 426 62.2
Ca_18192_v3 Cicer arietinum L. HOM05D005481 ORTHO05D006779 2.4e-111 406.8 428 63.1
Cfa022222 Carpinus fangiana HOM05D005481 ORTHO05D006779 1.6e-110 404.1 432 60.2
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 1.6e-110 404.1 407 64.1
FAN07G1071 Fragaria x ananassa HOM05D005481 ORTHO05D006779 2.7e-110 403.3 426 61.5
arahy.Tifrunner.gnm1.ann1.31BYXQ Arachis hypogaea HOM05D005481 ORTHO05D006779 7.8e-110 401.7 390 66.4
Eucgr.G02069 Eucalyptus grandis HOM05D005481 ORTHO05D006779 1.3e-109 401.0 442 58.8
Sed0010601 Sechium edule HOM05D005481 ORTHO05D006779 3.9e-109 399.4 490 56.5
Rhsim09G0085400 Rhododendron simsii HOM05D005481 ORTHO05D006779 5.1e-109 399.1 495 55.4
HanXRQChr17g0566271 Helianthus annuus HOM05D005481 ORTHO05D006779 8.6e-109 398.3 491 58.2
Lalb_Chr07g0187931 Lupinus albus HOM05D005481 ORTHO05D006779 4.3e-108 396.0 434 61.3
Phvul.002G184200 Phaseolus vulgaris HOM05D005481 ORTHO05D006779 7.3e-108 395.2 425 60.2
Manes.15G138800 Manihot esculenta HOM05D005481 ORTHO05D006779 6.2e-107 392.1 427 60.4
Nitab4.5_0000926g0040 Nicotiana tabacum HOM05D005481 ORTHO05D006779 8.1e-107 391.7 476 60.7
FvH4_4g26130 Fragaria vesca HOM05D005481 ORTHO05D006779 1.4e-106 391.0 433 61.2
FAN17G1043 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.4e-106 391.0 436 61.5
MD16G1013100 Malus domestica HOM05D005481 ORTHO05D006779 1.4e-106 391.0 430 60.0
MELO3C020059.2 Cucumis melo HOM05D005481 ORTHO05D006779 3.1e-106 389.8 484 57.2
Atru.chr11.1002 Acer truncatum HOM05D005481 ORTHO05D006779 4.0e-106 389.4 432 61.3
Sp5g23100 Schrenkiella parvula HOM05D005481 ORTHO05D006779 4.0e-106 389.4 481 58.4
TAR622G0189 Trochodendron aralioides HOM05D005481 ORTHO05D006779 5.2e-106 389.0 379 63.9
CsaV3_5G012960 Cucumis sativus L. HOM05D005481 ORTHO05D006779 1.5e-105 387.5 484 58.3
TWI74G0731 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 1.5e-105 387.5 434 58.8
MD13G1015600 Malus domestica HOM05D005481 ORTHO05D006779 2.6e-105 386.7 487 57.3
C06p41930 Brassica napus HOM05D005481 ORTHO05D006779 7.6e-105 385.2 436 60.6
AT1G68100 Arabidopsis thaliana HOM05D005481 ORTHO05D006779 1.7e-104 384.0 431 60.6
BcaB03g15132 Brassica carinata HOM05D005481 ORTHO05D006779 2.2e-104 383.6 440 58.4
Prupe.1G338200 Prunus persica HOM05D005481 ORTHO05D006779 1.1e-103 381.3 427 59.7
A07p34580 Brassica napus HOM05D005481 ORTHO05D006779 1.4e-103 380.9 429 60.8
Carub.0002s1458 Capsella rubella HOM05D005481 ORTHO05D006779 1.4e-103 380.9 426 59.6
ClCG11G000990 Citrullus lanatus HOM05D005481 ORTHO05D006779 3.2e-103 379.8 489 54.8
AL2G26810 Arabidopsis lyrata HOM05D005481 ORTHO05D006779 7.1e-103 378.6 426 59.2
CANSAT78G1557 Cannabis sativa HOM05D005481 ORTHO05D006779 7.1e-103 378.6 463 55.9
BcaC08g45998 Brassica carinata HOM05D005481 ORTHO05D006779 9.2e-103 378.3 432 60.2
C06p37930 Brassica napus HOM05D005481 ORTHO05D006779 1.6e-102 377.5 439 59.5
A07p32160 Brassica napus HOM05D005481 ORTHO05D006779 1.0e-101 374.8 500 55.6
BraA07t30846Z Brassica rapa HOM05D005481 ORTHO05D006779 1.0e-101 374.8 500 55.6
BcaC08g46237 Brassica carinata HOM05D005481 ORTHO05D006779 1.7e-101 374.0 432 60.6
CDE05G3246 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 2.3e-101 373.6 433 60.3
FAN22G2365 Fragaria x ananassa HOM05D005481 ORTHO05D006779 6.6e-101 372.1 467 57.6
Thhalv10018501m.g Eutrema salsugineum HOM05D005481 ORTHO05D006779 1.5e-100 370.9 441 58.5
CDE05G2094 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 7.3e-100 368.6 426 58.2
THA.LOC104821909 Tarenaya hassleriana HOM05D005481 ORTHO05D006779 7.3e-100 368.6 433 59.6
EL10Ac8g18625 Beta vulgaris HOM05D005481 ORTHO05D006779 1.6e-99 367.5 418 61.0
Os08g0467400 Oryza sativa ssp. japonica HOM05D005481 ORTHO05D006779 2.8e-99 366.7 444 57.4
ATR0598G125 Amborella trichopoda HOM05D005481 ORTHO05D006779 3.6e-99 366.3 436 58.3
BraA07t31076Z Brassica rapa HOM05D005481 ORTHO05D006779 2.4e-98 363.6 429 59.2
MBI19_g01916_MAGBIO Magnolia biondii HOM05D005481 ORTHO05D006779 2.0e-97 360.5 424 58.3
BolC6t38892H Brassica oleracea HOM05D005481 ORTHO05D006779 3.4e-97 359.8 432 58.6
BolC6t39238H Brassica oleracea HOM05D005481 ORTHO05D006779 3.8e-96 356.3 432 59.0
Aa31LG9G8490 Aethionema arabicum HOM05D005481 ORTHO05D006779 6.4e-96 355.5 470 55.7
FAN12G2411 Fragaria x ananassa HOM05D005481 ORTHO05D006779 8.4e-96 355.1 433 58.4
QL03p039175 Quercus lobata HOM05D005481 ORTHO05D006779 8.4e-96 355.1 616 45.1
Lsat_1_v5_gn_4_24241 Lactuca sativa HOM05D005481 ORTHO05D006779 4.2e-95 352.8 496 53.0
Duzib251G0084 Durio zibethinus HOM05D005481 ORTHO05D006779 1.7e-93 347.4 427 55.5
Sabra08G0106000 Salix brachista HOM05D005481 ORTHO05D006779 4.0e-90 336.3 452 51.5
CARHR060770 Cardamine hirsuta HOM05D005481 ORTHO05D006779 2.0e-89 334.0 378 59.0
Sc10g0004950 Simmondsia chinensis HOM05D005481 ORTHO05D006779 5.8e-89 332.4 412 52.9
Mapoly0096s0003 Marchantia polymorpha HOM05D005481 ORTHO05D006779 1.6e-83 314.3 516 47.5
Mapoly0096s0004 Marchantia polymorpha HOM05D005481 ORTHO05D006779 1.6e-83 314.3 516 47.5
Pp3c12_24640 Physcomitrium patens HOM05D005481 ORTHO05D006779 3.8e-80 303.1 442 52.3
AUR62033487 Chenopodium quinoa HOM05D005481 ORTHO05D006779 8.4e-80 302.0 383 52.5
SMO164G0085 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 2.4e-79 300.4 482 47.9
Nitab4.5_0007504g0030 Nicotiana tabacum HOM05D005481 ORTHO05D006779 5.5e-79 299.3 294 67.0
Hund03668 Selenicereus undatus HOM05D005481 ORTHO05D006779 3.7e-75 286.6 389 54.0
VMungo0251G3144 Vigna mungo HOM05D005481 ORTHO05D000001 8.1e-75 285.4 293 60.8
Duzib268G0472 Durio zibethinus HOM05D005481 ORTHO05D006779 5.8e-73 279.3 431 46.2
FAN12G2899 Fragaria x ananassa HOM05D005481 ORTHO05D006779 2.2e-72 277.3 294 60.5
Psat7g085400 Pisum sativum HOM05D005481 ORTHO05D006779 2.2e-72 277.3 331 58.9
Ciclev10018249m.g Citrus clementina HOM05D005481 ORTHO05D006779 9.3e-71 271.9 301 59.5
BcaC08g45996 Brassica carinata HOM05D005481 ORTHO05D006779 7.9e-70 268.9 433 51.3
Peaxi162Scf00337g00010 Petunia axillaris HOM05D005481 ORTHO05D006779 1.9e-68 264.2 288 63.5
SMO271G0121 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 2.8e-67 260.4 354 50.8
DCAR_002653 Daucus carota HOM05D005481 ORTHO05D006779 3.7e-67 260.0 297 59.6
HPP92_005759 Vanilla planifolia HOM05D005481 ORTHO05D006779 2.9e-64 250.4 434 43.8
Thecc.02G303600 Theobroma cacao HOM05D005481 ORTHO05D006779 1.3e-61 241.5 304 56.2
Zm00001eb037820 Zea mays HOM05D005481 ORTHO05D006779 1.3e-59 235.0 326 54.0
BcaB03g15400 Brassica carinata HOM05D005481 ORTHO05D006779 4.5e-57 226.5 221 62.9
AagrBONN_evm.TU.Sc2ySwM_368.3383 Anthoceros agrestis HOM05D005481 ORTHO05D006779 1.4e-55 221.5 336 51.5
AUR62011097 Chenopodium quinoa HOM05D005481 ORTHO05D006779 3.9e-53 213.4 387 46.0
Haze_10808 Corylus avellana HOM05D005481 ORTHO05D006779 5.7e-52 209.5 562 36.5
BcaB03g15128 Brassica carinata HOM05D005481 ORTHO05D006779 1.3e-51 208.4 353 52.7
BcaB03g15126 Brassica carinata HOM05D005481 ORTHO05D006779 1.9e-47 194.5 374 49.5
Dinv20505 Davidia involucrata HOM05D005481 ORTHO05D006779 1.6e-46 191.4 276 56.2
CBR_g56846 Chara braunii HOM05D005481 ORTHO05D006779 5.7e-44 183.0 564 34.8
SEGI_33830 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 1.5e-31 141.7 206 50.5
Oeu062661.1 Olea europaea HOM05D005481 ORTHO05D006779 3.2e-31 140.6 102 74.5
MCO07G486 Micromonas commoda HOM05D005481 ORTHO05D006779 3.0e-29 134.0 378 28.6
VMungo0251G2403 Vigna mungo HOM05D005481 ORTHO05D006779 4.0e-29 133.7 109 65.1
BcaB03g15129 Brassica carinata HOM05D005481 ORTHO05D006779 2.4e-26 124.4 251 49.4
CSS0044880 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 7.0e-26 122.9 119 67.2
Cpa.g.sc326.1 Carica papaya HOM05D005481 ORTHO05D006779 9.1e-26 122.5 87 77.0
BcaB03g15399 Brassica carinata HOM05D005481 ORTHO05D006779 9.5e-23 112.5 93 77.4
Oeu062663.1 Olea europaea HOM05D005481 ORTHO05D006779 1.0e-21 109.0 244 43.4
TAR374G1742 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.4e-21 108.6 142 59.2
Cpa.g.sc326.2 Carica papaya HOM05D005481 ORTHO05D006779 1.8e-21 108.2 73 76.7
TAR374G0503 Trochodendron aralioides HOM05D005481 ORTHO05D006779 4.0e-21 107.1 57 87.7
Sc10g0005080 Simmondsia chinensis HOM05D005481 ORTHO05D006779 8.6e-16 89.4 72 63.9
FAN12G0241 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.5e-15 88.6 94 55.3
Ah.09g225960 Amaranthus hybridus HOM05D005481 ORTHO05D006779 6.8e-13 79.7 154 45.5
CSS0020286 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 2.2e-11 74.7 96 56.2
CSS0008657 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.4e-10 72.0 63 69.8
MCO14G334 Micromonas commoda HOM05D005481 ORTHO05D006779 1.3e-08 65.5 179 31.8
HanXRQChr16g0527591 Helianthus annuus HOM05D005481 ORTHO05D006779 1.7e-08 65.1 43 74.4
SEGI_02848 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 3.6e-06 57.4 39 74.4


User provided reference genes

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