Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold659G53391 Striga asiatica HOM05D011217 ORTHO05D013910 6.8e-145 517.3 262 100.0
SGA_v2.0_scaffold37G14639 Striga asiatica HOM05D011217 ORTHO05D013910 1.3e-82 310.5 157 100.0
SGA_v2.0_scaffold90G27784 Striga asiatica HOM05D002693 ORTHO05D008074 1.3e-82 310.5 157 99.4
SGA_v2.0_scaffold3G01524 Striga asiatica HOM05D011217 ORTHO05D013910 5.5e-54 215.3 107 93.5
SGA_v2.0_scaffold44G16775 Striga asiatica HOM05D011217 ORTHO05D013910 4.7e-45 185.7 266 48.9
SGA_v2.0_scaffold225G43046 Striga asiatica HOM05D011217 ORTHO05D013910 3.2e-25 119.8 305 30.5
SGA_v2.0_scaffold260G45875 Striga asiatica HOM05D011217 ORTHO05D013910 5.8e-19 99.0 282 27.0
SGA_v2.0_scaffold74G24728 Striga asiatica HOM05D011217 ORTHO05D013910 7.8e-16 88.6 275 28.7
SGA_v2.0_scaffold21G09417 Striga asiatica HOM05D011217 ORTHO05D013910 1.1e-14 84.7 226 27.4
SGA_v2.0_scaffold194G40768 Striga asiatica HOM05D011217 ORTHO05D013910 9.6e-14 81.6 206 35.4
SGA_v2.0_scaffold109G31168 Striga asiatica HOM05D011217 ORTHO05D013910 9.0e-12 75.1 93 35.5
SGA_v2.0_scaffold223G42834 Striga asiatica HOM05D011217 ORTHO05D013910 1.3e-10 71.2 157 31.8
SGA_v2.0_scaffold194G40769 Striga asiatica HOM05D011217 ORTHO05D401946 1.1e-09 68.2 40 77.5
Sc03g0004530 Simmondsia chinensis HOM05D000876 ORTHO05D000285 1.3e-07 61.2 94 28.7
Medtr1g016370 Medicago truncatula HOM05D000876 ORTHO05D000285 3.0e-07 60.1 84 28.6
Medtr8g054100 Medicago truncatula HOM05D000876 ORTHO05D000285 3.0e-07 60.1 84 28.6
Lj1g0012065 Lotus japonicus HOM05D000876 ORTHO05D000285 3.9e-07 59.7 98 30.6
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 3.9e-07 59.7 84 28.6
Lj1g0024899 Lotus japonicus HOM05D000665 ORTHO05D000921 1.1e-06 58.2 86 36.0
QL07p023043 Quercus lobata HOM05D003171 ORTHO05D000921 1.1e-06 58.2 148 29.1
Lj2g0013227 Lotus japonicus HOM05D007209 ORTHO05D000921 1.9e-06 57.4 87 35.6
QL03p032583 Quercus lobata HOM05D000034 ORTHO05D000921 2.5e-06 57.0 148 29.1
QL04p024672 Quercus lobata HOM05D000034 ORTHO05D000921 2.5e-06 57.0 148 29.1
TAR555G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 2.5e-06 57.0 107 29.9
Lalb_Chr06g0172711 Lupinus albus HOM05D000665 ORTHO05D000140 3.3e-06 56.6 97 30.9
Dinv09638 Davidia involucrata HOM05D008473 ORTHO05D000921 5.6e-06 55.8 88 35.2
Medtr3g110155 Medicago truncatula HOM05D000876 ORTHO05D000285 7.3e-06 55.5 74 35.1
Medtr8g006585 Medicago truncatula HOM05D000876 ORTHO05D000285 7.3e-06 55.5 74 35.1
Medtr8g006695 Medicago truncatula HOM05D000876 ORTHO05D000285 7.3e-06 55.5 74 35.1
Dinv05111 Davidia involucrata HOM05D008473 ORTHO05D000921 9.6e-06 55.1 88 34.1
Medtr2g435870 Medicago truncatula HOM05D000876 ORTHO05D000285 9.6e-06 55.1 74 32.4


User provided reference genes

Program Settings