Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold657G53382 Striga asiatica HOM05D003951 ORTHO05D005378 0.0e+00 2026.5 1021 100.0
SGA_v2.0_scaffold40G15445 Striga asiatica HOM05D003951 ORTHO05D005378 0.0e+00 1736.1 915 96.5
MSTRG.19211 Avicennia marina HOM05D003951 ORTHO05D005378 0.0e+00 1600.1 990 80.9
Migut.J00480 Erythranthe guttata HOM05D003951 ORTHO05D005378 0.0e+00 1590.5 988 80.4
SalBow3G1921 Salvia bowleyana HOM05D003951 ORTHO05D005378 0.0e+00 1537.7 989 78.0
Oeu038879.1 Olea europaea HOM05D003951 ORTHO05D005378 0.0e+00 1511.9 990 74.9
Oeu017004.2 Olea europaea HOM05D003951 ORTHO05D005378 0.0e+00 1464.5 1085 68.2
Dinv30270 Davidia involucrata HOM05D003951 ORTHO05D005378 0.0e+00 1460.7 990 72.4
Hma1.2p1_0590F.1_g185010 Hydrangea macrophylla HOM05D003951 ORTHO05D005378 0.0e+00 1459.5 990 71.8
CSS0015540 Camellia sinensis var. sinensis HOM05D003951 ORTHO05D005378 0.0e+00 1433.3 989 71.5
Dinv14244 Davidia involucrata HOM05D003951 ORTHO05D005378 0.0e+00 1429.1 960 72.8
TAR383G0035 Trochodendron aralioides HOM05D003951 ORTHO05D005378 0.0e+00 1416.0 990 69.6
Manes.03G061800 Manihot esculenta HOM05D003951 ORTHO05D005378 0.0e+00 1414.4 990 70.4
Nitab4.5_0010350g0010 Nicotiana tabacum HOM05D003951 ORTHO05D005378 0.0e+00 1414.1 988 69.0
Peaxi162Scf01195g00118 Petunia axillaris HOM05D003951 ORTHO05D005378 0.0e+00 1407.1 988 69.1
Nitab4.5_0000132g0420 Nicotiana tabacum HOM05D003951 ORTHO05D005378 0.0e+00 1405.2 988 68.6
Gohir.D06G093700 Gossypium hirsutum HOM05D003951 ORTHO05D005378 0.0e+00 1402.5 990 69.8
GSVIVG01035648001 Vitis vinifera HOM05D003951 ORTHO05D005378 0.0e+00 1402.1 992 69.3
Cfa013355 Carpinus fangiana HOM05D003951 ORTHO05D005378 0.0e+00 1401.3 990 69.4
Gorai.010G108200 Gossypium raimondii HOM05D003951 ORTHO05D005378 0.0e+00 1398.3 990 69.5
Atru.chr7.2135 Acer truncatum HOM05D003951 ORTHO05D005378 0.0e+00 1396.7 988 69.0
Gohir.A06G094100 Gossypium hirsutum HOM05D003951 ORTHO05D005378 0.0e+00 1395.2 990 69.4
Thecc.09G042400 Theobroma cacao HOM05D003951 ORTHO05D005378 0.0e+00 1389.4 989 69.6
Prupe.1G450600 Prunus persica HOM05D003951 ORTHO05D005378 0.0e+00 1389.0 988 68.7
Duzib187G0774 Durio zibethinus HOM05D003951 ORTHO05D005378 0.0e+00 1385.5 990 68.8
Nitab4.5_0008726g0020 Nicotiana tabacum HOM05D003951 ORTHO05D005378 0.0e+00 1385.2 988 68.0
Cc06_g04830 Coffea canephora HOM05D003951 ORTHO05D005378 0.0e+00 1381.3 992 68.5
Solyc09g008610.4 Solanum lycopersicum HOM05D003951 ORTHO05D005378 0.0e+00 1378.2 988 67.6
Potri.018G039800 Populus trichocarpa HOM05D003951 ORTHO05D005378 0.0e+00 1377.5 990 67.7
CiPaw.08G024600 Carya illinoinensis HOM05D003951 ORTHO05D005378 0.0e+00 1374.4 989 68.8
Sopen09g003410 Solanum pennellii HOM05D003951 ORTHO05D005378 0.0e+00 1370.9 991 67.2
Cpa.g.sc7.257 Carica papaya HOM05D003951 ORTHO05D005378 0.0e+00 1369.0 990 68.0
Potri.006G240300 Populus trichocarpa HOM05D003951 ORTHO05D005378 0.0e+00 1366.7 990 67.4
PGSC0003DMG400012982 Solanum tuberosum HOM05D003951 ORTHO05D005378 0.0e+00 1366.7 988 67.1
QL12p029450 Quercus lobata HOM05D003951 ORTHO05D005378 0.0e+00 1362.1 990 68.0
Ciclev10007348m.g Citrus clementina HOM05D003951 ORTHO05D005378 0.0e+00 1360.5 989 67.2
Gohir.D13G192700 Gossypium hirsutum HOM05D003951 ORTHO05D005378 0.0e+00 1360.1 992 67.6
MD08G1115900 Malus domestica HOM05D003951 ORTHO05D005378 0.0e+00 1358.6 990 67.7
Aqoxy7G01531 Aquilegia oxysepala HOM05D003951 ORTHO05D005378 0.0e+00 1358.2 988 66.8
Gorai.013G218700 Gossypium raimondii HOM05D003951 ORTHO05D005378 0.0e+00 1356.7 992 67.4
Gohir.A13G186000 Gossypium hirsutum HOM05D003951 ORTHO05D005378 0.0e+00 1354.7 992 67.4
CANSAT25G2930 Cannabis sativa HOM05D003951 ORTHO05D005378 0.0e+00 1352.0 991 66.9
Sabra18G0039700 Salix brachista HOM05D003951 ORTHO05D005378 0.0e+00 1351.7 990 66.6
Nn2g11661 Nelumbo nucifera HOM05D003951 ORTHO05D005378 0.0e+00 1348.2 990 65.9
MD15G1095600 Malus domestica HOM05D003951 ORTHO05D005378 0.0e+00 1347.0 988 67.0
Sabra06G0187900 Salix brachista HOM05D003951 ORTHO05D005378 0.0e+00 1346.3 1013 65.2
RcHm_v2.0_Chr6g0305971 Rosa chinensis HOM05D003951 ORTHO05D005378 0.0e+00 1345.1 990 67.2
TWI32G0786 Tripterygium wilfordii HOM05D003951 ORTHO05D005378 0.0e+00 1345.1 990 65.8
Gorai.004G290400 Gossypium raimondii HOM05D003951 ORTHO05D005378 0.0e+00 1340.5 988 67.3
Gohir.D08G272000 Gossypium hirsutum HOM05D003951 ORTHO05D005378 0.0e+00 1339.7 988 67.2
PSO210G0075 Papaver somniferum HOM05D003951 ORTHO05D005378 0.0e+00 1336.6 991 66.5
PSO210G7231 Papaver somniferum HOM05D003951 ORTHO05D005378 0.0e+00 1336.2 991 66.4
CAN.G1759.1 Capsicum annuum HOM05D003951 ORTHO05D005378 0.0e+00 1335.1 957 67.8
FvH4_2g35850 Fragaria vesca HOM05D003951 ORTHO05D005378 0.0e+00 1332.8 991 66.4
DCAR_004489 Daucus carota HOM05D003951 ORTHO05D005378 0.0e+00 1331.2 1088 63.1
FAN27G3265 Fragaria x ananassa HOM05D003951 ORTHO05D005378 0.0e+00 1331.2 991 66.5
Lj1g0011830 Lotus japonicus HOM05D003951 ORTHO05D005378 0.0e+00 1331.2 990 66.4
Glyma.04G082000 Glycine max HOM05D003951 ORTHO05D005378 0.0e+00 1330.9 990 66.1
FAN15G0863 Fragaria x ananassa HOM05D003951 ORTHO05D005378 0.0e+00 1328.5 991 66.2
Gohir.A08G250500 Gossypium hirsutum HOM05D003951 ORTHO05D005378 0.0e+00 1327.8 988 66.7
vmacro10453 Vaccinium macrocarpon HOM05D003951 ORTHO05D005378 0.0e+00 1327.8 1010 65.9
Psat5g022720 Pisum sativum HOM05D003951 ORTHO05D005378 0.0e+00 1327.0 988 65.9
Thhalv10012570m.g Eutrema salsugineum HOM05D003951 ORTHO05D005378 0.0e+00 1325.8 990 65.1
Lsat_1_v5_gn_6_63741 Lactuca sativa HOM05D003951 ORTHO05D005378 0.0e+00 1325.1 1021 64.9
FAN20G1017 Fragaria x ananassa HOM05D003951 ORTHO05D005378 0.0e+00 1324.3 991 66.3
MBI04_g14936_MAGBIO Magnolia biondii HOM05D003951 ORTHO05D005378 0.0e+00 1323.9 993 64.6
arahy.Tifrunner.gnm1.ann1.ZA6ZKK Arachis hypogaea HOM05D003951 ORTHO05D005378 0.0e+00 1323.5 988 65.3
ECA233G3193 Erigeron canadensis HOM05D003951 ORTHO05D005378 0.0e+00 1323.1 959 67.5
Lalb_Chr08g0243161 Lupinus albus HOM05D003951 ORTHO05D005378 0.0e+00 1320.8 988 65.5
Medtr3g110140 Medicago truncatula HOM05D003951 ORTHO05D005378 0.0e+00 1320.1 990 66.0
Glyma.06G083700 Glycine max HOM05D003951 ORTHO05D005378 0.0e+00 1319.7 990 65.4
arahy.Tifrunner.gnm1.ann1.6KB6B4 Arachis hypogaea HOM05D003951 ORTHO05D005378 0.0e+00 1317.8 988 65.0
Eucgr.C02905 Eucalyptus grandis HOM05D003951 ORTHO05D005378 0.0e+00 1317.4 982 65.7
BcaNung01934 Brassica carinata HOM05D003951 ORTHO05D005378 0.0e+00 1317.0 990 64.7
HanXRQChr08g0221151 Helianthus annuus HOM05D003951 ORTHO05D005378 0.0e+00 1315.8 993 66.6
TPR.G1335 Trifolium pratense HOM05D003951 ORTHO05D005378 0.0e+00 1315.8 990 65.5
Hund19527 Selenicereus undatus HOM05D003951 ORTHO05D005378 0.0e+00 1315.4 990 65.5
PGR044G0887 Punica granatum HOM05D003951 ORTHO05D005378 0.0e+00 1315.1 989 65.0
Sp6g32040 Schrenkiella parvula HOM05D003951 ORTHO05D005378 0.0e+00 1312.4 990 64.6
THA.LOC104814774 Tarenaya hassleriana HOM05D003951 ORTHO05D005378 0.0e+00 1311.2 990 64.8
VMungo1309G1090 Vigna mungo HOM05D003951 ORTHO05D005378 0.0e+00 1306.6 991 65.0
Sc23g0005190 Simmondsia chinensis HOM05D003951 ORTHO05D005378 0.0e+00 1305.8 990 64.4
Ca_15606_v3 Cicer arietinum L. HOM05D003951 ORTHO05D005378 0.0e+00 1303.9 988 64.6
CARHR201660 Cardamine hirsuta HOM05D003951 ORTHO05D005378 0.0e+00 1303.5 988 64.1
BcaC03g13375 Brassica carinata HOM05D003951 ORTHO05D005378 0.0e+00 1303.1 988 64.0
CANSAT56G2409 Cannabis sativa HOM05D003951 ORTHO05D005378 0.0e+00 1299.6 997 64.9
BcaB08g37043 Brassica carinata HOM05D003951 ORTHO05D005378 0.0e+00 1297.3 990 64.1
C02p05210 Brassica napus HOM05D003951 ORTHO05D005378 0.0e+00 1297.3 988 63.9
Lalb_Chr23g0269551 Lupinus albus HOM05D003951 ORTHO05D005378 0.0e+00 1296.6 988 64.5
EL10Ac2g04048 Beta vulgaris HOM05D003951 ORTHO05D005378 0.0e+00 1295.4 990 64.3
Carub.0006s1003 Capsella rubella HOM05D003951 ORTHO05D005378 0.0e+00 1295.4 988 63.9
A10p26200 Brassica napus HOM05D003951 ORTHO05D005378 0.0e+00 1294.6 990 64.1
BcaC04g19214 Brassica carinata HOM05D003951 ORTHO05D005378 0.0e+00 1293.9 991 64.3
AT5G11560 Arabidopsis thaliana HOM05D003951 ORTHO05D005378 0.0e+00 1293.1 988 63.8
C09p65250 Brassica napus HOM05D003951 ORTHO05D005378 0.0e+00 1292.3 991 64.3
AL6G22230 Arabidopsis lyrata HOM05D003951 ORTHO05D005378 0.0e+00 1291.9 988 63.6
Phvul.009G107800 Phaseolus vulgaris HOM05D003951 ORTHO05D005378 0.0e+00 1291.6 990 64.7
BolC2t06471H Brassica oleracea HOM05D003951 ORTHO05D005378 0.0e+00 1288.1 1003 63.0
CANSAT56G0789 Cannabis sativa HOM05D003951 ORTHO05D005378 0.0e+00 1285.0 997 64.7
BraA10t44677Z Brassica rapa HOM05D003951 ORTHO05D005378 0.0e+00 1282.7 1010 62.9
COL.COLO4_18674 Corchorus olitorius HOM05D003951 ORTHO05D005378 0.0e+00 1276.9 918 68.3
Nitab4.5_0004281g0080 Nicotiana tabacum HOM05D003951 ORTHO05D005378 0.0e+00 1272.3 915 67.0
BolC9t59353H Brassica oleracea HOM05D003951 ORTHO05D005378 0.0e+00 1270.8 1017 62.1
Sed0024259 Sechium edule HOM05D003951 ORTHO05D005378 0.0e+00 1266.9 992 62.0
Sed0007642 Sechium edule HOM05D003951 ORTHO05D005378 0.0e+00 1266.5 992 62.0
CsaV3_2G030980 Cucumis sativus L. HOM05D003951 ORTHO05D005378 0.0e+00 1264.6 992 62.2
MELO3C011151.2 Cucumis melo HOM05D003951 ORTHO05D005378 0.0e+00 1263.8 992 62.2
Lj8A588G18 Lonicera japonica HOM05D003951 ORTHO05D005378 0.0e+00 1256.5 973 64.1
ClCG08G012310 Citrullus lanatus HOM05D003951 ORTHO05D005378 0.0e+00 1254.2 998 61.4
BraA02t05087Z Brassica rapa HOM05D003951 ORTHO05D005378 0.0e+00 1231.5 1005 60.7
ATR0315G102 Amborella trichopoda HOM05D003951 ORTHO05D005378 0.0e+00 1228.0 985 59.9
AUR62043518 Chenopodium quinoa HOM05D003951 ORTHO05D005378 0.0e+00 1223.0 990 61.1
AUR62041721 Chenopodium quinoa HOM05D003951 ORTHO05D005378 0.0e+00 1218.4 990 60.8
CDE09G1231 Ceratophyllum demersum HOM05D003951 ORTHO05D005378 0.0e+00 1211.1 988 61.0
Aa31LG3G15640 Aethionema arabicum HOM05D003951 ORTHO05D005378 0.0e+00 1188.3 988 60.1
A02p01070 Brassica napus HOM05D003951 ORTHO05D005378 0.0e+00 1179.9 990 59.5
AUR62009306 Chenopodium quinoa HOM05D003951 ORTHO05D005378 0.0e+00 1179.9 990 59.3
Os05g0230600 Oryza sativa ssp. japonica HOM05D003951 ORTHO05D005378 0.0e+00 1173.3 970 58.8
Zm00001eb350390 Zea mays HOM05D003951 ORTHO05D005378 0.0e+00 1156.4 979 57.5
Ah.16g105420 Amaranthus hybridus HOM05D003951 ORTHO05D005378 0.0e+00 1149.8 1019 58.0
Zm00001eb284300 Zea mays HOM05D003951 ORTHO05D005378 0.0e+00 1138.3 968 57.4
Medtr3g110090 Medicago truncatula HOM05D003951 ORTHO05D005378 0.0e+00 1104.7 851 64.0
Ah.10g035090 Amaranthus hybridus HOM05D003951 ORTHO05D005378 5.8e-309 1064.3 852 61.0
CDE02G1137 Ceratophyllum demersum HOM05D003951 ORTHO05D005378 2.2e-300 1035.8 958 56.3
SHI18663 Sapria himalayana HOM05D003951 ORTHO05D005378 2.4e-294 1015.8 813 61.7
Pp3c24_6940 Physcomitrium patens HOM05D003951 ORTHO05D005378 5.7e-272 941.4 994 48.4
Mapoly0001s0045 Marchantia polymorpha HOM05D003951 ORTHO05D005378 1.4e-270 936.8 986 49.6
Haze_16526 Corylus avellana HOM05D003951 ORTHO05D005378 2.8e-255 885.9 677 63.2
Actinidia14667 Actinidia chinensis HOM05D003951 ORTHO05D005378 1.6e-242 843.6 528 76.9
Ah.16g105540 Amaranthus hybridus HOM05D003951 ORTHO05D005378 1.5e-235 820.5 708 56.6
SMO361G0709 Selaginella moellendorffii HOM05D003951 ORTHO05D005378 2.3e-233 813.1 958 46.1
Lj7A704G78 Lonicera japonica HOM05D003951 ORTHO05D005378 3.4e-232 809.3 676 60.1
AagrBONN_evm.TU.Sc2ySwM_228.1359 Anthoceros agrestis HOM05D003951 ORTHO05D005378 1.9e-203 713.8 900 42.9
Ah.16g105530 Amaranthus hybridus HOM05D003951 ORTHO05D005378 2.8e-194 683.3 516 66.3
Actinidia15735 Actinidia chinensis HOM05D003951 ORTHO05D005378 2.1e-181 640.6 828 45.2
TAR626G1339 Trochodendron aralioides HOM05D003951 ORTHO05D005378 1.0e-156 558.5 349 77.1
Actinidia14668 Actinidia chinensis HOM05D003951 ORTHO05D005378 5.3e-153 546.2 418 63.9
HPP92_003925 Vanilla planifolia HOM05D003951 ORTHO05D005378 2.3e-148 530.8 934 36.8
Lj7C704T11 Lonicera japonica HOM05D003951 ORTHO05D005378 8.0e-133 479.2 282 83.0
Haze_16527 Corylus avellana HOM05D003951 ORTHO05D005378 4.0e-132 476.9 282 83.7
CBR_g46228 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-127 461.8 853 34.2
Gohir.A08G250566 Gossypium hirsutum HOM05D003951 ORTHO05D005378 5.4e-121 439.9 268 81.0
PRCOL_00001466 Prasinoderma coloniale HOM05D003951 ORTHO05D005378 1.1e-113 415.6 1038 30.0
TAR626G1232 Trochodendron aralioides HOM05D003951 ORTHO05D005378 2.0e-107 394.8 332 56.9
TAR626G0188 Trochodendron aralioides HOM05D003951 ORTHO05D005378 2.6e-107 394.4 275 70.9
Cre01.g042550 Chlamydomonas reinhardtii HOM05D003951 ORTHO05D005378 9.6e-102 375.9 1034 30.1
unitig_22.g5110 Utricularia gibba HOM05D003951 ORTHO05D020105 1.7e-98 365.2 383 51.4
vmacro07087 Vaccinium macrocarpon HOM05D003951 ORTHO05D005378 6.6e-95 353.2 681 36.4
Hma1.2p1_1163F.1_g262790 Hydrangea macrophylla HOM05D003951 ORTHO05D005378 8.7e-87 326.2 319 52.7
MCO05G363 Micromonas commoda HOM05D003951 ORTHO05D005378 2.5e-78 298.1 414 40.8
Actinidia13321 Actinidia chinensis HOM05D003951 ORTHO05D005378 1.3e-74 285.8 257 54.1
Psat2g043440 Pisum sativum HOM05D003951 ORTHO05D005378 1.8e-71 275.4 365 42.2
Lj6g0012970 Lotus japonicus HOM05D003951 ORTHO05D006115 7.7e-59 233.4 254 47.6
Nn3g18131 Nelumbo nucifera HOM05D003951 ORTHO05D005378 4.4e-54 217.6 134 84.3
CBR_g46226 Chara braunii HOM05D003951 ORTHO05D005378 1.5e-49 202.6 182 55.5
BcaB01g05473 Brassica carinata HOM05D003951 ORTHO05D005378 1.4e-47 196.1 115 82.6
Actinidia31233 Actinidia chinensis HOM05D006865 ORTHO05D009005 2.3e-47 195.3 140 69.3
C03p05840 Brassica napus HOM05D003951 ORTHO05D005378 1.5e-46 192.6 111 84.7
DCAR_004486 Daucus carota HOM05D003951 ORTHO05D035008 2.4e-44 185.3 105 82.9
BolC3t13096H Brassica oleracea HOM05D003951 ORTHO05D005378 1.5e-41 176.0 111 80.2
Peaxi162Scf00110g00822 Petunia axillaris HOM05D003951 ORTHO05D005378 4.8e-37 161.0 188 51.1
BcaB01g05472 Brassica carinata HOM05D003951 ORTHO05D020105 1.4e-36 159.5 107 72.0
C03p05850 Brassica napus HOM05D003951 ORTHO05D020105 1.4e-36 159.5 107 72.0
BolC3t13097H Brassica oleracea HOM05D003951 ORTHO05D020105 9.1e-36 156.8 107 71.0
Cfa023291 Carpinus fangiana HOM05D003951 ORTHO05D005378 9.8e-30 136.7 315 30.8
Hma1.2p1_1163F.1_g262780 Hydrangea macrophylla HOM05D003951 ORTHO05D033496 4.2e-25 121.3 71 88.7
A03p05100 Brassica napus HOM05D003951 ORTHO05D033496 2.6e-22 112.1 120 57.5
BraA03t09844Z Brassica rapa HOM05D003951 ORTHO05D033496 2.6e-22 112.1 120 57.5
CiPaw.07G205500 Carya illinoinensis HOM05D003951 ORTHO05D020105 7.0e-20 104.0 71 73.2
Peaxi162Scf00110g00823 Petunia axillaris HOM05D003951 ORTHO05D305850 7.0e-20 104.0 183 35.5
CiPaw.07G205600 Carya illinoinensis HOM05D003951 ORTHO05D005378 2.7e-19 102.1 81 58.0
Peaxi162Scf00110g00821 Petunia axillaris HOM05D003951 ORTHO05D035008 2.9e-18 98.6 82 58.5
EL10Ac6g13930 Beta vulgaris HOM05D001881 ORTHO05D001856 2.5e-17 95.5 64 70.3
CAN.G541.23 Capsicum annuum HOM05D004796 ORTHO05D006527 7.3e-17 94.0 53 77.4
TAR629G0021 Trochodendron aralioides HOM05D003951 ORTHO05D000285 4.7e-16 91.3 167 34.7
Nn3g18130 Nelumbo nucifera HOM05D003951 ORTHO05D020105 6.1e-16 90.9 72 62.5
Dinv34398 Davidia involucrata HOM05D003951 ORTHO05D005378 1.4e-15 89.7 63 65.1
SHI18664 Sapria himalayana HOM05D003951 ORTHO05D020105 4.4e-14 84.7 137 38.7
Psat6g121680 Pisum sativum HOM05D000840 ORTHO05D000670 7.5e-14 84.0 50 74.0
Ah.04g155890 Amaranthus hybridus HOM05D003518 ORTHO05D031015 1.9e-12 79.3 60 66.7
Ah.05g173020 Amaranthus hybridus HOM05D003951 ORTHO05D031015 1.7e-10 72.8 60 61.7
Ah.05g172920 Amaranthus hybridus HOM05D003951 ORTHO05D031015 3.9e-10 71.6 60 61.7
Psat1g107320 Pisum sativum HOM05D001108 ORTHO05D001619 7.5e-06 57.4 115 29.6
Ah.04g157730 Amaranthus hybridus HOM05D031501 ORTHO05D060762 9.8e-06 57.0 37 73.0


User provided reference genes

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