Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold653G53370 Striga asiatica HOM05D026199 ORTHO05D400440 6.9e-141 503.8 231 100.0
SGA_v2.0_scaffold204G41676 Striga asiatica HOM05D026199 ORTHO05D400830 1.6e-121 439.5 252 83.7
SGA_v2.0_scaffold78G25458 Striga asiatica HOM05D026199 ORTHO05D402147 1.2e-76 290.4 220 71.8
SGA_v2.0_scaffold298G47651 Striga asiatica HOM05D026199 ORTHO05D030687 7.1e-13 78.6 88 55.7
SGA_v2.0_scaffold19G08791 Striga asiatica HOM05D000371 ORTHO05D001484 1.8e-11 73.9 87 50.6
RcHm_v2.0_Chr6g0283541 Rosa chinensis HOM05D000371 ORTHO05D001484 2.0e-07 60.5 93 44.1
CAN.G1818.4 Capsicum annuum HOM05D000371 ORTHO05D001484 4.5e-07 59.3 106 37.7
Cc03_g09080 Coffea canephora HOM05D000371 ORTHO05D001484 4.5e-07 59.3 90 42.2
MD10G1156300 Malus domestica HOM05D000371 ORTHO05D001484 4.5e-07 59.3 93 43.0
Peaxi162Scf00286g00929 Petunia axillaris HOM05D000371 ORTHO05D001484 4.5e-07 59.3 90 42.2
Potri.014G149400 Populus trichocarpa HOM05D000371 ORTHO05D001484 4.5e-07 59.3 110 39.1
Oeu056450.4 Olea europaea HOM05D000371 ORTHO05D001484 5.9e-07 58.9 87 44.8
Prupe.8G194100 Prunus persica HOM05D000371 ORTHO05D001484 1.0e-06 58.2 93 43.0
CANSAT78G1440 Cannabis sativa HOM05D000371 ORTHO05D001484 1.3e-06 57.8 93 41.9
QL06p027392 Quercus lobata HOM05D000371 ORTHO05D001484 1.3e-06 57.8 93 41.9
ECA247G3328 Erigeron canadensis HOM05D000371 ORTHO05D001484 2.2e-06 57.0 79 46.8
Gohir.A11G140700 Gossypium hirsutum HOM05D000371 ORTHO05D001484 2.2e-06 57.0 93 40.9
Gohir.D11G147200 Gossypium hirsutum HOM05D000371 ORTHO05D001484 2.2e-06 57.0 93 40.9
Gorai.007G157600 Gossypium raimondii HOM05D000371 ORTHO05D001484 2.2e-06 57.0 93 40.9
Gohir.A07G091400 Gossypium hirsutum HOM05D000371 ORTHO05D001484 2.9e-06 56.6 93 40.9
Gohir.D07G096100 Gossypium hirsutum HOM05D000371 ORTHO05D001484 2.9e-06 56.6 93 40.9
Gorai.001G103400 Gossypium raimondii HOM05D000371 ORTHO05D001484 2.9e-06 56.6 93 40.9
Manes.13G051764 Manihot esculenta HOM05D000371 ORTHO05D001484 2.9e-06 56.6 90 37.8
PGSC0003DMG400031522 Solanum tuberosum HOM05D000371 ORTHO05D001484 2.9e-06 56.6 103 36.9
Duzib133G0343 Durio zibethinus HOM05D000371 ORTHO05D001484 3.8e-06 56.2 93 40.9
Glyma.08G106700 Glycine max HOM05D000371 ORTHO05D001484 3.8e-06 56.2 93 40.9
Solyc09g092690.3 Solanum lycopersicum HOM05D000371 ORTHO05D001484 3.8e-06 56.2 90 38.9
Sopen09g035620 Solanum pennellii HOM05D000371 ORTHO05D001484 3.8e-06 56.2 90 40.0
HPP92_003172 Vanilla planifolia HOM05D000371 ORTHO05D001484 3.8e-06 56.2 93 40.9
VMungo0251G3607 Vigna mungo HOM05D000371 ORTHO05D001484 3.8e-06 56.2 93 41.9
Duzib211G0643 Durio zibethinus HOM05D000371 ORTHO05D001484 5.0e-06 55.8 93 39.8
FvH4_2g18150 Fragaria vesca HOM05D000371 ORTHO05D001484 5.0e-06 55.8 93 41.9
FAN07G0161 Fragaria x ananassa HOM05D000371 ORTHO05D001484 5.0e-06 55.8 129 34.1
FAN15G0871 Fragaria x ananassa HOM05D000371 ORTHO05D001484 5.0e-06 55.8 93 41.9
Lalb_Chr12g0205901 Lupinus albus HOM05D000371 ORTHO05D001484 5.0e-06 55.8 93 39.8
MD04G1022400 Malus domestica HOM05D000371 ORTHO05D001484 5.0e-06 55.8 93 40.9
MD05G1166200 Malus domestica HOM05D000371 ORTHO05D001484 5.0e-06 55.8 93 41.9
Nitab4.5_0002671g0110 Nicotiana tabacum HOM05D000371 ORTHO05D001484 5.0e-06 55.8 127 31.5
Nitab4.5_0006376g0040 Nicotiana tabacum HOM05D000371 ORTHO05D001484 5.0e-06 55.8 125 32.0
Sed0014954 Sechium edule HOM05D001071 ORTHO05D000932 5.0e-06 55.8 35 71.4
SEGI_35120 Sequoiadendron giganteum HOM05D001071 ORTHO05D000932 5.0e-06 55.8 30 80.0
CANSAT01G0614 Cannabis sativa HOM05D000371 ORTHO05D001484 6.5e-06 55.5 93 39.8
Sabra14G0112600 Salix brachista HOM05D000371 ORTHO05D001484 6.5e-06 55.5 93 40.9
FAN24G2049 Fragaria x ananassa HOM05D000371 ORTHO05D001484 8.5e-06 55.1 93 41.9
FAN27G3507 Fragaria x ananassa HOM05D000371 ORTHO05D001484 8.5e-06 55.1 93 41.9
Lsat_1_v5_gn_1_55841 Lactuca sativa HOM05D001071 ORTHO05D000932 8.5e-06 55.1 50 50.0
Lsat_1_v5_gn_9_17400 Lactuca sativa HOM05D000371 ORTHO05D001484 8.5e-06 55.1 68 50.0
Nn1g08125 Nelumbo nucifera HOM05D000371 ORTHO05D001484 8.5e-06 55.1 90 40.0
Os04g0352400 Oryza sativa ssp. japonica HOM05D000371 ORTHO05D001484 8.5e-06 55.1 137 32.1
Phvul.003G064500 Phaseolus vulgaris HOM05D000371 ORTHO05D001484 8.5e-06 55.1 93 39.8
PGR044G1772 Punica granatum HOM05D000371 ORTHO05D001484 8.5e-06 55.1 93 40.9
SalBow4G2893 Salvia bowleyana HOM05D001071 ORTHO05D000932 8.5e-06 55.1 33 72.7
Hund18462 Selenicereus undatus HOM05D000371 ORTHO05D001484 8.5e-06 55.1 68 51.5
SGA_v2.0_scaffold126G33826 Striga asiatica HOM05D001071 ORTHO05D000932 8.5e-06 55.1 27 85.2


User provided reference genes

Program Settings