Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold64G22058 Striga asiatica HOM05D000747 ORTHO05D004807 1.9e-77 292.4 138 100.0
SGA_v2.0_scaffold157G37358 Striga asiatica HOM05D000747 ORTHO05D004807 9.1e-32 140.6 85 78.8
Migut.G00024 Erythranthe guttata HOM05D000747 ORTHO05D004807 2.0e-31 139.4 84 79.8
MSTRG.10174 Avicennia marina HOM05D000747 ORTHO05D004807 2.1e-28 129.4 84 73.8
SalBow8G1635 Salvia bowleyana HOM05D000747 ORTHO05D004807 6.1e-28 127.9 103 64.1
Dinv15128 Davidia involucrata HOM05D000747 ORTHO05D004807 4.1e-24 115.2 84 65.5
Oeu052157.1 Olea europaea HOM05D000747 ORTHO05D004807 1.6e-23 113.2 84 61.9
Rhsim04G0243000 Rhododendron simsii HOM05D000747 ORTHO05D004807 5.9e-23 111.3 84 61.9
vmacro07974 Vaccinium macrocarpon HOM05D000747 ORTHO05D004807 1.3e-22 110.2 91 60.4
Actinidia18481 Actinidia chinensis HOM05D000747 ORTHO05D004807 2.3e-22 109.4 85 62.4
CAN.G170.17 Capsicum annuum HOM05D000747 ORTHO05D004807 5.0e-22 108.2 84 60.7
CAN.G3221.1 Capsicum annuum HOM05D000747 ORTHO05D004807 5.0e-22 108.2 84 60.7
Solyc01g057900.3 Solanum lycopersicum HOM05D000747 ORTHO05D004807 1.5e-21 106.7 84 59.5
Sopen01g023220 Solanum pennellii HOM05D000747 ORTHO05D004807 1.5e-21 106.7 84 59.5
GSVIVG01034942001 Vitis vinifera HOM05D000747 ORTHO05D004807 4.3e-21 105.1 84 60.7
Ciclev10004231m.g Citrus clementina HOM05D000747 ORTHO05D004807 7.3e-21 104.4 84 56.0
Duzib151G0433 Durio zibethinus HOM05D000747 ORTHO05D004807 9.5e-21 104.0 84 59.5
CiPaw.01G133500 Carya illinoinensis HOM05D000747 ORTHO05D004807 1.6e-20 103.2 84 59.5
Peaxi162Scf00126g01514 Petunia axillaris HOM05D000747 ORTHO05D004807 1.6e-20 103.2 84 58.3
TAR362G0993 Trochodendron aralioides HOM05D000747 ORTHO05D004807 2.1e-20 102.8 84 57.1
Thecc.04G307300 Theobroma cacao HOM05D000747 ORTHO05D004807 1.0e-19 100.5 84 57.1
Duzib212G0904 Durio zibethinus HOM05D000747 ORTHO05D004807 1.4e-19 100.1 83 57.8
Hma1.2p1_1096F.1_g256630 Hydrangea macrophylla HOM05D000747 ORTHO05D004807 1.4e-19 100.1 84 54.8
Gohir.A10G175700 Gossypium hirsutum HOM05D000747 ORTHO05D004807 2.3e-19 99.4 84 56.0
Haze_00834 Corylus avellana HOM05D000747 ORTHO05D004807 3.1e-19 99.0 84 54.8
HanXRQChr06g0182841 Helianthus annuus HOM05D000747 ORTHO05D004807 4.0e-19 98.6 80 56.2
Gohir.D10G182300 Gossypium hirsutum HOM05D000747 ORTHO05D004807 6.8e-19 97.8 84 54.8
QL06p013303 Quercus lobata HOM05D000747 ORTHO05D004807 6.8e-19 97.8 84 56.0
Potri.010G150000 Populus trichocarpa HOM05D000747 ORTHO05D004807 8.9e-19 97.4 84 57.1
MELO3C021252.2 Cucumis melo HOM05D000747 ORTHO05D004807 1.2e-18 97.1 91 49.5
Gohir.A09G241400 Gossypium hirsutum HOM05D000747 ORTHO05D004807 2.0e-18 96.3 84 54.8
Gorai.011G204200 Gossypium raimondii HOM05D000747 ORTHO05D004807 2.0e-18 96.3 84 54.8
TWI53G1735 Tripterygium wilfordii HOM05D000747 ORTHO05D004807 2.0e-18 96.3 84 54.8
TAR633G1529 Trochodendron aralioides HOM05D000747 ORTHO05D004807 2.0e-18 96.3 83 57.8
Ah.07g203890 Amaranthus hybridus HOM05D000747 ORTHO05D004807 3.4e-18 95.5 84 53.6
Lsat_1_v5_gn_6_70541 Lactuca sativa HOM05D000747 ORTHO05D004807 3.4e-18 95.5 83 50.6
RcHm_v2.0_Chr4g0426201 Rosa chinensis HOM05D000747 ORTHO05D004807 3.4e-18 95.5 84 53.6
CSS0019056 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D004807 4.4e-18 95.1 83 57.8
ClCG06G004370 Citrullus lanatus HOM05D000747 ORTHO05D004807 5.8e-18 94.7 91 49.5
FAN07G0175 Fragaria x ananassa HOM05D000747 ORTHO05D004807 5.8e-18 94.7 89 50.6
Lj3A836G20 Lonicera japonica HOM05D000747 ORTHO05D004807 5.8e-18 94.7 76 60.5
Cc03_g00480 Coffea canephora HOM05D000747 ORTHO05D004807 7.5e-18 94.4 85 55.3
Gorai.006G265700 Gossypium raimondii HOM05D000747 ORTHO05D004807 7.5e-18 94.4 84 53.6
Sed0005984 Sechium edule HOM05D000747 ORTHO05D004807 7.5e-18 94.4 91 49.5
Sabra10G0115600 Salix brachista HOM05D000747 ORTHO05D004807 1.3e-17 93.6 84 54.8
FvH4_4g20760 Fragaria vesca HOM05D000747 ORTHO05D004807 1.7e-17 93.2 84 51.2
Prupe.1G111600 Prunus persica HOM05D000747 ORTHO05D004807 3.7e-17 92.0 84 53.6
Sp3g15400 Schrenkiella parvula HOM05D000747 ORTHO05D004807 3.7e-17 92.0 84 53.6
Sc25g0001570 Simmondsia chinensis HOM05D000747 ORTHO05D004807 4.9e-17 91.7 84 54.8
AUR62002590 Chenopodium quinoa HOM05D000747 ORTHO05D004807 6.4e-17 91.3 83 53.0
Potri.008G101300 Populus trichocarpa HOM05D000747 ORTHO05D004807 6.4e-17 91.3 84 54.8
BcaB06g25812 Brassica carinata HOM05D000747 ORTHO05D004807 8.3e-17 90.9 84 53.6
FAN17G1353 Fragaria x ananassa HOM05D000747 ORTHO05D004807 8.3e-17 90.9 81 53.1
Gohir.D09G242100 Gossypium hirsutum HOM05D000747 ORTHO05D004807 8.3e-17 90.9 84 52.4
EL10Ac3g06290 Beta vulgaris HOM05D000747 ORTHO05D004807 1.1e-16 90.5 83 53.0
Nn3g21805 Nelumbo nucifera HOM05D000747 ORTHO05D004807 1.1e-16 90.5 84 54.8
Sabra08G0076600 Salix brachista HOM05D000747 ORTHO05D004807 1.1e-16 90.5 84 54.8
A05p32580 Brassica napus HOM05D000747 ORTHO05D004807 1.4e-16 90.1 84 53.6
BraA05t22082Z Brassica rapa HOM05D000747 ORTHO05D004807 1.4e-16 90.1 84 53.6
Eucgr.B03986 Eucalyptus grandis HOM05D000747 ORTHO05D004807 1.9e-16 89.7 84 50.0
Thhalv10019984m.g Eutrema salsugineum HOM05D000747 ORTHO05D004807 1.9e-16 89.7 84 52.4
MD13G1148100 Malus domestica HOM05D000747 ORTHO05D004807 1.9e-16 89.7 84 52.4
Aqoxy2G02629 Aquilegia oxysepala HOM05D000747 ORTHO05D004807 2.4e-16 89.4 84 50.0
BcaC09g48678 Brassica carinata HOM05D000747 ORTHO05D004807 2.4e-16 89.4 84 51.2
C01p47020 Brassica napus HOM05D000747 ORTHO05D004807 2.4e-16 89.4 84 51.2
BolC1t04670H Brassica oleracea HOM05D000747 ORTHO05D004807 2.4e-16 89.4 84 51.2
MD16G1148200 Malus domestica HOM05D000747 ORTHO05D004807 2.4e-16 89.4 84 51.2
Atru.chr4.3105 Acer truncatum HOM05D000747 ORTHO05D004807 3.2e-16 89.0 84 51.2
Hund12236 Selenicereus undatus HOM05D000747 ORTHO05D004807 4.1e-16 88.6 83 49.4
Manes.03G208600 Manihot esculenta HOM05D000747 ORTHO05D004807 5.4e-16 88.2 83 50.6
PSO210G6954 Papaver somniferum HOM05D000747 ORTHO05D004807 5.4e-16 88.2 84 52.4
BcaC05g28820 Brassica carinata HOM05D000747 ORTHO05D004807 7.0e-16 87.8 84 52.4
C05p49250 Brassica napus HOM05D000747 ORTHO05D004807 7.0e-16 87.8 84 52.4
BolC5t33666H Brassica oleracea HOM05D000747 ORTHO05D004807 7.0e-16 87.8 84 52.4
PSO761G0701 Papaver somniferum HOM05D000747 ORTHO05D004807 7.0e-16 87.8 84 52.4
Sed0003045 Sechium edule HOM05D000747 ORTHO05D004807 7.0e-16 87.8 91 48.4
AUR62030014 Chenopodium quinoa HOM05D000747 ORTHO05D004807 9.2e-16 87.4 82 53.7
Aqoxy5G03355 Aquilegia oxysepala HOM05D000747 ORTHO05D004807 1.2e-15 87.0 81 50.6
BraA01t03772Z Brassica rapa HOM05D000747 ORTHO05D004807 1.2e-15 87.0 84 51.2
CANSAT78G0170 Cannabis sativa HOM05D000747 ORTHO05D004807 1.2e-15 87.0 91 45.1
Phvul.003G118500 Phaseolus vulgaris HOM05D000747 ORTHO05D004807 1.2e-15 87.0 84 48.8
arahy.Tifrunner.gnm1.ann1.R130QB Arachis hypogaea HOM05D000747 ORTHO05D004807 1.6e-15 86.7 84 46.4
Phvul.006G120900 Phaseolus vulgaris HOM05D000747 ORTHO05D004807 1.6e-15 86.7 84 48.8
A01p37100 Brassica napus HOM05D000747 ORTHO05D004807 2.0e-15 86.3 84 51.2
BcaB04g20855 Brassica carinata HOM05D000747 ORTHO05D004807 2.7e-15 85.9 84 51.2
ECA233G3437 Erigeron canadensis HOM05D000747 ORTHO05D004807 2.7e-15 85.9 75 52.0
VMungo1215G1053 Vigna mungo HOM05D000747 ORTHO05D004807 2.7e-15 85.9 84 47.6
arahy.Tifrunner.gnm1.ann1.YUC3W2 Arachis hypogaea HOM05D000747 ORTHO05D004807 3.5e-15 85.5 84 46.4
Cpa.g.sc146.73 Carica papaya HOM05D000747 ORTHO05D004807 3.5e-15 85.5 84 48.8
THA.LOC104820321 Tarenaya hassleriana HOM05D000747 ORTHO05D004807 3.5e-15 85.5 84 50.0
CSS0023043 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D004807 4.6e-15 85.1 84 52.4
MBI18_g27389_MAGBIO Magnolia biondii HOM05D000747 ORTHO05D004807 4.6e-15 85.1 84 51.2
CARHR092470 Cardamine hirsuta HOM05D000747 ORTHO05D004807 6.0e-15 84.7 84 50.0
AL947U10010 Arabidopsis lyrata HOM05D000747 ORTHO05D004807 7.8e-15 84.3 87 48.3
Glyma.17G037600 Glycine max HOM05D000747 ORTHO05D004807 7.8e-15 84.3 84 47.6
AL3G30230 Arabidopsis lyrata HOM05D000747 ORTHO05D004807 1.7e-14 83.2 84 50.0
AT3G17205 Arabidopsis thaliana HOM05D000747 ORTHO05D004807 1.7e-14 83.2 84 50.0
Ca_00947_v3 Cicer arietinum L. HOM05D000747 ORTHO05D004807 2.3e-14 82.8 84 46.4
Glyma.15G137000 Glycine max HOM05D000747 ORTHO05D004807 2.3e-14 82.8 84 46.4
arahy.Tifrunner.gnm1.ann1.NSV5VW Arachis hypogaea HOM05D000747 ORTHO05D004807 3.0e-14 82.4 84 48.8
Aa31LG8G4180 Aethionema arabicum HOM05D000747 ORTHO05D004807 3.9e-14 82.0 84 47.6
ATR0693G276 Amborella trichopoda HOM05D000747 ORTHO05D004807 3.9e-14 82.0 72 54.2
Carub.0003s1696 Capsella rubella HOM05D000747 ORTHO05D004807 3.9e-14 82.0 84 50.0
Glyma.07G235800 Glycine max HOM05D000747 ORTHO05D004807 3.9e-14 82.0 84 46.4
Lalb_Chr15g0089041 Lupinus albus HOM05D000747 ORTHO05D004807 3.9e-14 82.0 84 47.6
PGR031G1986 Punica granatum HOM05D000747 ORTHO05D004807 5.0e-14 81.6 84 45.2
SHI00092 Sapria himalayana HOM05D000747 ORTHO05D004807 5.0e-14 81.6 76 50.0
CDE05G1257 Ceratophyllum demersum HOM05D000747 ORTHO05D004807 1.1e-13 80.5 82 45.1
CDE11G0596 Ceratophyllum demersum HOM05D000747 ORTHO05D004807 1.1e-13 80.5 82 46.3
Medtr2g033080 Medicago truncatula HOM05D000747 ORTHO05D004807 1.5e-13 80.1 84 46.4
Gohir.A12G078600 Gossypium hirsutum HOM05D000747 ORTHO05D028421 1.9e-13 79.7 84 47.6
Lj6g0013861 Lotus japonicus HOM05D000747 ORTHO05D004807 1.9e-13 79.7 84 45.2
arahy.Tifrunner.gnm1.ann1.CPQB8S Arachis hypogaea HOM05D000747 ORTHO05D004807 2.5e-13 79.3 84 47.6
TPR.G10108 Trifolium pratense HOM05D000747 ORTHO05D004807 7.3e-13 77.8 84 45.2
Medtr2g033040 Medicago truncatula HOM05D000747 ORTHO05D004807 9.5e-13 77.4 84 45.2
HPP92_015995 Vanilla planifolia HOM05D000747 ORTHO05D004807 2.8e-12 75.9 83 47.0
Psat1g162680 Pisum sativum HOM05D000747 ORTHO05D004807 1.1e-11 73.9 84 45.2
SalBow8G3583 Salvia bowleyana HOM05D000747 ORTHO05D004807 1.5e-10 70.1 48 66.7
Os05g0159000 Oryza sativa ssp. japonica HOM05D000747 ORTHO05D004807 5.8e-10 68.2 83 41.0
SEGI_11758 Sequoiadendron giganteum HOM05D000747 ORTHO05D004807 3.7e-09 65.5 83 43.4
Nitab4.5_0005403g0020 Nicotiana tabacum HOM05D000747 ORTHO05D004807 6.4e-09 64.7 48 60.4
Nitab4.5_0001334g0040 Nicotiana tabacum HOM05D000747 ORTHO05D004807 1.1e-08 63.9 48 60.4
CAN.G170.20 Capsicum annuum HOM05D000747 ORTHO05D004807 1.4e-08 63.5 48 58.3
AagrBONN_evm.TU.Sc2ySwM_340.498 Anthoceros agrestis HOM05D000747 ORTHO05D004807 1.2e-07 60.5 70 42.9
SMO165G0153 Selaginella moellendorffii HOM05D000747 ORTHO05D004807 2.1e-07 59.7 70 41.4
Actinidia31580 Actinidia chinensis HOM05D000747 ORTHO05D004807 1.0e-06 57.4 48 43.8
DCAR_002525 Daucus carota HOM05D000747 ORTHO05D004807 1.3e-06 57.0 48 50.0
Lj3A836G21 Lonicera japonica HOM05D000747 ORTHO05D004807 2.3e-06 56.2 48 54.2
Mapoly0140s0005 Marchantia polymorpha HOM05D000747 ORTHO05D004807 3.0e-06 55.8 83 34.9
unitig_88.g27699 Utricularia gibba HOM05D000747 ORTHO05D004807 3.0e-06 55.8 48 54.2
MD16G1155700 Malus domestica HOM05D000747 ORTHO05D004807 8.6e-06 54.3 48 52.1
MD17G1270000 Malus domestica HOM05D000747 ORTHO05D004807 8.6e-06 54.3 48 52.1


User provided reference genes

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