Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 1.4e-87 326.2 166 100.0
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 1.6e-67 259.6 166 82.5
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 7.1e-63 244.2 168 79.2
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 4.9e-48 194.9 164 61.6
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 4.6e-46 188.3 167 59.9
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 1.9e-44 183.0 162 59.9
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 3.3e-44 182.2 162 59.3
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 6.2e-43 177.9 136 64.7
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 1.8e-42 176.4 155 56.8
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 1.8e-42 176.4 165 54.5
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 1.8e-42 176.4 165 54.5
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 4.0e-42 175.3 148 60.1
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 5.3e-42 174.9 151 60.9
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 1.2e-41 173.7 139 61.9
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 1.5e-41 173.3 166 54.8
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 4.5e-41 171.8 143 62.9
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 1.3e-40 170.2 160 55.0
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 1.3e-40 170.2 165 55.2
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 4.9e-40 168.3 143 59.4
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 6.4e-40 167.9 140 58.6
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 6.4e-40 167.9 161 52.2
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 1.9e-39 166.4 160 54.4
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 1.9e-39 166.4 158 55.7
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 1.9e-39 166.4 139 59.0
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 2.4e-39 166.0 159 55.3
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 2.4e-39 166.0 159 55.3
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 2.4e-39 166.0 165 53.9
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 3.2e-39 165.6 166 52.4
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 4.2e-39 165.2 162 53.7
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 4.2e-39 165.2 160 53.8
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 4.2e-39 165.2 170 54.1
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 5.4e-39 164.9 154 56.5
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 5.4e-39 164.9 154 56.5
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 7.1e-39 164.5 164 54.3
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 7.1e-39 164.5 170 54.7
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 7.1e-39 164.5 143 62.2
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 7.1e-39 164.5 159 54.1
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 7.1e-39 164.5 160 53.8
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 9.3e-39 164.1 164 54.3
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 9.3e-39 164.1 159 54.1
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 1.2e-38 163.7 154 55.2
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 2.1e-38 162.9 140 58.6
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 2.1e-38 162.9 147 55.8
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 2.7e-38 162.5 156 55.8
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 2.7e-38 162.5 159 52.8
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 2.7e-38 162.5 159 52.8
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 3.5e-38 162.2 138 59.4
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 3.5e-38 162.2 138 59.4
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 4.6e-38 161.8 161 54.7
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 4.6e-38 161.8 136 58.8
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 4.6e-38 161.8 156 54.5
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 4.6e-38 161.8 144 58.3
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 4.6e-38 161.8 144 58.3
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 4.6e-38 161.8 162 53.7
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 6.0e-38 161.4 163 54.0
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 6.0e-38 161.4 163 51.5
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 7.9e-38 161.0 169 52.1
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 7.9e-38 161.0 167 49.1
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 7.9e-38 161.0 167 49.1
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 3.0e-37 159.1 163 51.5
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 3.0e-37 159.1 139 56.8
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 3.9e-37 158.7 125 61.6
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 5.1e-37 158.3 171 49.7
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 6.7e-37 157.9 158 53.2
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 6.7e-37 157.9 144 56.9
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 1.1e-36 157.1 141 56.7
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 3.3e-36 155.6 136 56.6
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 3.3e-36 155.6 166 51.2
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 5.6e-36 154.8 152 51.3
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 7.4e-36 154.5 140 58.6
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 7.4e-36 154.5 135 55.6
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 9.6e-36 154.1 139 56.1
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 1.3e-35 153.7 153 51.0
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 1.3e-35 153.7 188 44.7
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 4.8e-35 151.8 158 53.2
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 4.8e-35 151.8 165 49.1
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 8.1e-35 151.0 163 50.9
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 1.8e-34 149.8 133 56.4
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 2.4e-34 149.4 124 59.7
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 3.1e-34 149.1 143 56.6
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 3.1e-34 149.1 179 46.9
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 3.1e-34 149.1 139 54.0
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 6.9e-34 147.9 104 69.2
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 9.0e-34 147.5 136 53.7
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 1.5e-33 146.7 163 50.3
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 2.0e-33 146.4 158 51.3
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 3.4e-33 145.6 169 49.1
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 4.9e-32 141.7 164 48.8
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 3.2e-31 139.0 134 55.2
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 3.9e-29 132.1 94 64.9
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 7.4e-28 127.9 139 50.4
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 3.7e-27 125.6 144 46.5
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 4.8e-27 125.2 122 52.5
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 1.2e-25 120.6 138 47.1
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 2.0e-25 119.8 100 57.0
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 5.8e-25 118.2 154 44.8
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 2.2e-24 116.3 139 46.0
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 2.9e-24 115.9 162 40.7
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 3.8e-24 115.5 143 46.2
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 8.4e-24 114.4 136 46.3
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 1.1e-23 114.0 151 45.0
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 6.1e-22 108.2 135 45.9
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 1.1e-20 104.0 68 69.1
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 7.4e-20 101.3 93 55.9
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 1.3e-19 100.5 63 76.2
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 1.3e-16 90.5 158 36.7
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 1.3e-16 90.5 53 75.5
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 1.3e-16 90.5 70 61.4
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 1.7e-16 90.1 93 50.5
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 5.0e-16 88.6 48 81.2
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 6.7e-13 78.2 98 45.9
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 2.0e-12 76.6 71 54.9
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 3.8e-08 62.4 103 36.9
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 6.1e-06 55.1 83 36.1


User provided reference genes

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