Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold64G21857 Striga asiatica HOM05D007015 ORTHO05D007679 4.3e-63 244.6 131 100.0
SGA_v2.0_scaffold32G13158 Striga asiatica HOM05D007015 ORTHO05D007679 4.5e-28 128.3 139 59.0
Migut.B00238 Erythranthe guttata HOM05D007015 ORTHO05D007679 1.8e-24 116.3 133 55.6
Lsat_1_v5_gn_9_109600 Lactuca sativa HOM05D007015 ORTHO05D007679 1.8e-24 116.3 137 52.6
HanXRQChr03g0061181 Helianthus annuus HOM05D007015 ORTHO05D007679 2.3e-24 115.9 148 50.7
CSS0034426 Camellia sinensis var. sinensis HOM05D007015 ORTHO05D007679 5.1e-24 114.8 132 54.5
CSS0043793 Camellia sinensis var. sinensis HOM05D007015 ORTHO05D007679 5.1e-24 114.8 132 54.5
Duzib132G0398 Durio zibethinus HOM05D007015 ORTHO05D007679 8.7e-24 114.0 132 53.0
Actinidia00522 Actinidia chinensis HOM05D007015 ORTHO05D007679 1.5e-23 113.2 133 51.1
Gohir.A13G034500 Gossypium hirsutum HOM05D007015 ORTHO05D007679 1.5e-23 113.2 132 52.3
MSTRG.20084 Avicennia marina HOM05D007015 ORTHO05D007679 2.5e-23 112.5 129 55.0
CAN.G1412.4 Capsicum annuum HOM05D007015 ORTHO05D007679 2.5e-23 112.5 129 53.5
ECA240G3875 Erigeron canadensis HOM05D007015 ORTHO05D007679 3.3e-23 112.1 139 52.5
Dinv23523 Davidia involucrata HOM05D007015 ORTHO05D007679 4.3e-23 111.7 133 52.6
Gohir.D13G032901 Gossypium hirsutum HOM05D007015 ORTHO05D007679 4.3e-23 111.7 132 51.5
COL.COLO4_25926 Corchorus olitorius HOM05D007015 ORTHO05D007679 5.6e-23 111.3 132 51.5
Haze_02382 Corylus avellana HOM05D007015 ORTHO05D007679 7.4e-23 110.9 133 51.9
Thecc.02G085800 Theobroma cacao HOM05D007015 ORTHO05D007679 9.6e-23 110.5 132 50.8
Cfa005006 Carpinus fangiana HOM05D007015 ORTHO05D007679 1.3e-22 110.2 133 51.1
Gorai.013G037300 Gossypium raimondii HOM05D007015 ORTHO05D007679 1.3e-22 110.2 132 50.8
Manes.15G163500 Manihot esculenta HOM05D007015 ORTHO05D007679 2.1e-22 109.4 132 51.5
Sopen01g051790 Solanum pennellii HOM05D007015 ORTHO05D007679 2.1e-22 109.4 129 51.9
Nitab4.5_0000308g0060 Nicotiana tabacum HOM05D007015 ORTHO05D007679 2.8e-22 109.0 132 51.5
Sed0022084 Sechium edule HOM05D007015 ORTHO05D007679 2.8e-22 109.0 136 50.0
Lj9C370G1 Lonicera japonica HOM05D007015 ORTHO05D007679 6.2e-22 107.8 132 50.8
Lj9C372G4 Lonicera japonica HOM05D007015 ORTHO05D007679 6.2e-22 107.8 132 50.8
PGSC0003DMG400000706 Solanum tuberosum HOM05D007015 ORTHO05D007679 6.2e-22 107.8 77 72.7
THA.LOC104807318 Tarenaya hassleriana HOM05D007015 ORTHO05D007679 6.2e-22 107.8 132 51.5
TWI79G1149 Tripterygium wilfordii HOM05D007015 ORTHO05D007679 6.2e-22 107.8 132 50.8
Nitab4.5_0004172g0110 Nicotiana tabacum HOM05D007015 ORTHO05D007679 8.1e-22 107.5 132 50.8
PGR142G1975 Punica granatum HOM05D007015 ORTHO05D007679 8.1e-22 107.5 133 48.1
MSTRG.27699 Avicennia marina HOM05D007015 ORTHO05D007679 1.1e-21 107.1 133 51.1
CiPaw.06G135500 Carya illinoinensis HOM05D007015 ORTHO05D007679 1.8e-21 106.3 136 48.5
Peaxi162Scf00016g00829 Petunia axillaris HOM05D007015 ORTHO05D007679 1.8e-21 106.3 76 72.4
Nn5g29599 Nelumbo nucifera HOM05D007015 ORTHO05D007679 4.0e-21 105.1 132 49.2
TAR381G1286 Trochodendron aralioides HOM05D007015 ORTHO05D007679 5.3e-21 104.8 132 49.2
Nn1g04999 Nelumbo nucifera HOM05D007015 ORTHO05D007679 6.9e-21 104.4 133 48.9
TAR625G0084 Trochodendron aralioides HOM05D007015 ORTHO05D007679 6.9e-21 104.4 132 49.2
TAR625G0285 Trochodendron aralioides HOM05D007015 ORTHO05D007679 6.9e-21 104.4 132 49.2
CiPaw.05G064200 Carya illinoinensis HOM05D007015 ORTHO05D007679 9.0e-21 104.0 133 48.1
Potri.004G154600 Populus trichocarpa HOM05D007015 ORTHO05D007679 9.0e-21 104.0 132 49.2
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 9.0e-21 104.0 77 72.7
CsaV3_7G023540 Cucumis sativus L. HOM05D007015 ORTHO05D007679 1.5e-20 103.2 139 48.2
Sabra04G0102600 Salix brachista HOM05D007015 ORTHO05D007679 2.0e-20 102.8 135 46.7
Sed0027719 Sechium edule HOM05D007015 ORTHO05D007679 2.0e-20 102.8 133 49.6
Atru.chr5.3012 Acer truncatum HOM05D007015 ORTHO05D007679 4.5e-20 101.7 132 48.5
Duzib052G0472 Durio zibethinus HOM05D007015 ORTHO05D007679 4.5e-20 101.7 77 67.5
MELO3C012524.2 Cucumis melo HOM05D007015 ORTHO05D007679 7.6e-20 100.9 133 49.6
Rhsim11G0176800 Rhododendron simsii HOM05D007015 ORTHO05D007679 7.6e-20 100.9 135 50.4
ClCG02G005030 Citrullus lanatus HOM05D007015 ORTHO05D007679 1.7e-19 99.8 133 48.9
CSS0036295 Camellia sinensis var. sinensis HOM05D007015 ORTHO05D007679 2.2e-19 99.4 84 64.3
Ciclev10028323m.g Citrus clementina HOM05D007015 ORTHO05D007679 3.8e-19 98.6 132 48.5
arahy.Tifrunner.gnm1.ann1.9AGX7Y Arachis hypogaea HOM05D007015 ORTHO05D007679 1.1e-18 97.1 133 48.1
arahy.Tifrunner.gnm1.ann1.VXY3NA Arachis hypogaea HOM05D007015 ORTHO05D007679 1.9e-18 96.3 133 48.1
SalBow3G2347 Salvia bowleyana HOM05D007015 ORTHO05D007679 3.2e-18 95.5 134 46.3
ATR0733G072 Amborella trichopoda HOM05D007015 ORTHO05D007679 4.6e-17 91.7 76 64.5
Oeu020759.1 Olea europaea HOM05D007015 ORTHO05D007679 4.6e-17 91.7 60 78.3
Ca_20873_v3 Cicer arietinum L. HOM05D007015 ORTHO05D007679 6.0e-17 91.3 133 44.4
Gohir.D12G028100 Gossypium hirsutum HOM05D007015 ORTHO05D007679 7.9e-17 90.9 95 52.6
Medtr4g070010 Medicago truncatula HOM05D007015 ORTHO05D007679 1.0e-16 90.5 135 43.7
Psat7g184640 Pisum sativum HOM05D007015 ORTHO05D007679 1.0e-16 90.5 133 44.4
Lalb_Chr01g0002571 Lupinus albus HOM05D007015 ORTHO05D007679 1.8e-16 89.7 132 45.5
Gorai.008G028700 Gossypium raimondii HOM05D007015 ORTHO05D007679 2.3e-16 89.4 77 58.4
Phvul.011G045500 Phaseolus vulgaris HOM05D007015 ORTHO05D007679 3.0e-16 89.0 132 42.4
VMungo1127G1579 Vigna mungo HOM05D007015 ORTHO05D007679 3.9e-16 88.6 132 42.4
vmacro02110 Vaccinium macrocarpon HOM05D007015 ORTHO05D007679 5.1e-16 88.2 137 46.7
unitig_744.g24247 Utricularia gibba HOM05D002700 ORTHO05D003228 6.7e-16 87.8 77 59.7
Aqoxy5G01645 Aquilegia oxysepala HOM05D007015 ORTHO05D007679 1.5e-15 86.7 146 40.4
AUR62011326 Chenopodium quinoa HOM05D007015 ORTHO05D007679 1.5e-15 86.7 84 57.1
Glyma.12G043500 Glycine max HOM05D007015 ORTHO05D007679 1.5e-15 86.7 133 42.9
AUR62016734 Chenopodium quinoa HOM05D007015 ORTHO05D007679 1.9e-15 86.3 84 57.1
Glyma.11G118100 Glycine max HOM05D007015 ORTHO05D007679 1.9e-15 86.3 133 42.9
MD10G1076600 Malus domestica HOM05D007015 ORTHO05D007679 1.9e-15 86.3 133 43.6
MSTRG.5397 Avicennia marina HOM05D007015 ORTHO05D007679 2.5e-15 85.9 133 42.9
Gohir.A12G028600 Gossypium hirsutum HOM05D007015 ORTHO05D007679 2.5e-15 85.9 77 57.1
PSO700G0017 Papaver somniferum HOM05D007015 ORTHO05D007679 2.5e-15 85.9 133 44.4
QL11p043649 Quercus lobata HOM05D007015 ORTHO05D007679 3.3e-15 85.5 131 43.5
Hund06231 Selenicereus undatus HOM05D007015 ORTHO05D007679 3.3e-15 85.5 132 43.2
TPR.G20759 Trifolium pratense HOM05D007015 ORTHO05D007679 3.3e-15 85.5 84 56.0
EL10Ac9g21726 Beta vulgaris HOM05D007015 ORTHO05D007679 9.6e-15 84.0 84 56.0
Lj3g0008828 Lotus japonicus HOM05D007015 ORTHO05D007679 9.6e-15 84.0 132 41.7
Sc14g0002090 Simmondsia chinensis HOM05D007015 ORTHO05D007679 9.6e-15 84.0 131 44.3
Prupe.8G097400 Prunus persica HOM05D007015 ORTHO05D007679 1.3e-14 83.6 133 42.1
FvH4_2g08750 Fragaria vesca HOM05D007015 ORTHO05D007679 2.1e-14 82.8 133 41.4
MD05G1066700 Malus domestica HOM05D007015 ORTHO05D007679 2.1e-14 82.8 133 42.1
Ah.01g019410 Amaranthus hybridus HOM05D007015 ORTHO05D007679 2.8e-14 82.4 84 51.2
FAN24G0062 Fragaria x ananassa HOM05D007015 ORTHO05D007679 3.7e-14 82.0 139 39.6
Hund00268 Selenicereus undatus HOM05D007015 ORTHO05D007679 4.8e-14 81.6 138 40.6
FAN15G1974 Fragaria x ananassa HOM05D007015 ORTHO05D007679 6.3e-14 81.3 133 40.6
FAN20G1161 Fragaria x ananassa HOM05D007015 ORTHO05D007679 6.3e-14 81.3 133 41.4
CDE04G3710 Ceratophyllum demersum HOM05D007015 ORTHO05D007679 1.1e-13 80.5 76 56.6
SEGI_27995 Sequoiadendron giganteum HOM05D007015 ORTHO05D007679 2.4e-13 79.3 84 52.4
Eucgr.I01267 Eucalyptus grandis HOM05D007015 ORTHO05D007679 4.1e-13 78.6 138 42.0
RcHm_v2.0_Chr6g0264211 Rosa chinensis HOM05D007015 ORTHO05D007679 5.3e-13 78.2 131 38.9
Nn1g01371 Nelumbo nucifera HOM05D007015 ORTHO05D007679 6.9e-13 77.8 60 61.7
CDE02G1906 Ceratophyllum demersum HOM05D007015 ORTHO05D007679 1.5e-12 76.6 128 41.4
DCAR_028986 Daucus carota HOM05D007015 ORTHO05D007679 1.5e-12 76.6 73 58.9
MBI16_g42991_MAGBIO Magnolia biondii HOM05D007015 ORTHO05D007679 4.5e-12 75.1 79 51.9
HPP92_027117 Vanilla planifolia HOM05D007015 ORTHO05D007679 3.2e-10 68.9 148 36.5
HPP92_013431 Vanilla planifolia HOM05D007015 ORTHO05D007679 7.2e-10 67.8 148 36.5
AagrBONN_evm.TU.Sc2ySwM_117.322 Anthoceros agrestis HOM05D007015 ORTHO05D007679 2.7e-09 65.9 147 33.3
Pp3c14_3730 Physcomitrium patens HOM05D007015 ORTHO05D007679 1.0e-08 63.9 88 42.0
Os03g0723600 Oryza sativa ssp. japonica HOM05D007015 ORTHO05D007679 1.9e-07 59.7 146 34.2
SMO367G0892 Selaginella moellendorffii HOM05D007015 ORTHO05D007679 2.5e-07 59.3 90 40.0
Zm00001eb215850 Zea mays HOM05D007015 ORTHO05D007679 4.3e-07 58.5 145 34.5


User provided reference genes

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