Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold649G53360 Striga asiatica HOM05D005198 ORTHO05D006839 7.4e-103 377.1 176 100.0
FAN26G1320 Fragaria x ananassa HOM05D005198 ORTHO05D006839 7.6e-15 84.7 48 77.1
FAN28G0627 Fragaria x ananassa HOM05D005198 ORTHO05D006839 7.6e-15 84.7 48 77.1
RcHm_v2.0_Chr2g0123631 Rosa chinensis HOM05D005198 ORTHO05D006839 7.6e-15 84.7 48 77.1
Oeu020813.1 Olea europaea HOM05D005198 ORTHO05D006839 1.7e-14 83.6 48 75.0
SalBow3G0226 Salvia bowleyana HOM05D005198 ORTHO05D006839 1.7e-14 83.6 48 77.1
MD15G1424000 Malus domestica HOM05D005198 ORTHO05D006839 2.2e-14 83.2 48 75.0
PGR142G0872 Punica granatum HOM05D005198 ORTHO05D006839 2.2e-14 83.2 48 77.1
ClCG07G015220 Citrullus lanatus HOM05D005198 ORTHO05D006839 3.8e-14 82.4 48 75.0
Cc03_g14040 Coffea canephora HOM05D005198 ORTHO05D006839 3.8e-14 82.4 48 75.0
PSO675G4502 Papaver somniferum HOM05D005198 ORTHO05D006839 3.8e-14 82.4 48 77.1
PSO732G0749 Papaver somniferum HOM05D005198 ORTHO05D006839 3.8e-14 82.4 48 77.1
Peaxi162Scf00075g01544 Petunia axillaris HOM05D005198 ORTHO05D006839 3.8e-14 82.4 49 73.5
CAN.G1411.3 Capsicum annuum HOM05D005198 ORTHO05D006839 4.9e-14 82.0 48 75.0
Nitab4.5_0000122g0140 Nicotiana tabacum HOM05D005198 ORTHO05D006839 4.9e-14 82.0 48 75.0
Nitab4.5_0011921g0010 Nicotiana tabacum HOM05D005198 ORTHO05D006839 4.9e-14 82.0 48 75.0
Solyc08g014060.4 Solanum lycopersicum HOM05D005198 ORTHO05D006839 4.9e-14 82.0 48 75.0
Sopen08g004940 Solanum pennellii HOM05D005198 ORTHO05D006839 4.9e-14 82.0 48 75.0
FvH4_1g25500 Fragaria vesca HOM05D005198 ORTHO05D006839 6.4e-14 81.6 48 75.0
Actinidia28982 Actinidia chinensis HOM05D005198 ORTHO05D006839 8.4e-14 81.3 48 72.9
Rhsim04G0106800 Rhododendron simsii HOM05D005198 ORTHO05D006839 8.4e-14 81.3 48 72.9
Sed0009334 Sechium edule HOM05D005198 ORTHO05D006839 8.4e-14 81.3 48 75.0
QL10p055731 Quercus lobata HOM05D005198 ORTHO05D006839 1.1e-13 80.9 48 75.0
Lj4A14T50 Lonicera japonica HOM05D005198 ORTHO05D006839 1.4e-13 80.5 48 75.0
TAR365G0102 Trochodendron aralioides HOM05D005198 ORTHO05D006839 1.4e-13 80.5 48 75.0
Ciclev10019752m.g Citrus clementina HOM05D005198 ORTHO05D006839 1.9e-13 80.1 48 72.9
MELO3C017760.2 Cucumis melo HOM05D005198 ORTHO05D006839 1.9e-13 80.1 48 72.9
CiPaw.02G100600 Carya illinoinensis HOM05D005198 ORTHO05D006839 2.4e-13 79.7 48 72.9
Migut.G01222 Erythranthe guttata HOM05D005198 ORTHO05D006839 2.4e-13 79.7 48 75.0
CsaV3_4G002810 Cucumis sativus L. HOM05D005198 ORTHO05D006839 3.2e-13 79.3 48 70.8
HanXRQChr15g0483441 Helianthus annuus HOM05D005198 ORTHO05D006839 3.2e-13 79.3 48 70.8
Atru.BG.83.p Acer truncatum HOM05D005198 ORTHO05D006839 4.2e-13 79.0 48 72.9
CSS0046337 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 5.4e-13 78.6 48 70.8
CSS0050366 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 5.4e-13 78.6 48 70.8
TWI63G1273 Tripterygium wilfordii HOM05D005198 ORTHO05D006839 5.4e-13 78.6 48 72.9
Dinv07059 Davidia involucrata HOM05D005198 ORTHO05D006839 7.1e-13 78.2 48 70.8
Dinv33201 Davidia involucrata HOM05D005198 ORTHO05D006839 7.1e-13 78.2 48 70.8
Lalb_Chr09g0328121 Lupinus albus HOM05D005198 ORTHO05D006839 7.1e-13 78.2 48 72.9
Prupe.1G207000 Prunus persica HOM05D005198 ORTHO05D006839 7.1e-13 78.2 48 72.9
Potri.013G126300 Populus trichocarpa HOM05D005198 ORTHO05D006839 9.3e-13 77.8 48 70.8
Sabra13G0105600 Salix brachista HOM05D005198 ORTHO05D006839 9.3e-13 77.8 48 70.8
Glyma.02G137200 Glycine max HOM05D005198 ORTHO05D006839 1.2e-12 77.4 48 70.8
Glyma.07G208200 Glycine max HOM05D005198 ORTHO05D006839 1.2e-12 77.4 48 70.8
Phvul.003G296400 Phaseolus vulgaris HOM05D005198 ORTHO05D006839 1.2e-12 77.4 48 70.8
VMungo0251G3269 Vigna mungo HOM05D005198 ORTHO05D006839 1.2e-12 77.4 48 70.8
arahy.Tifrunner.gnm1.ann1.A4X0ZB Arachis hypogaea HOM05D005198 ORTHO05D006839 1.6e-12 77.0 48 70.8
Ca_25383_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 1.6e-12 77.0 48 70.8
ECA232G1195 Erigeron canadensis HOM05D005198 ORTHO05D006839 1.6e-12 77.0 48 72.9
Manes.04G036150 Manihot esculenta HOM05D005198 ORTHO05D006839 1.6e-12 77.0 48 70.8
Zm00001eb246620 Zea mays HOM05D005198 ORTHO05D006839 1.6e-12 77.0 48 70.8
Aqoxy2G02750 Aquilegia oxysepala HOM05D005198 ORTHO05D006839 2.1e-12 76.6 48 68.8
COL.COLO4_23329 Corchorus olitorius HOM05D005198 ORTHO05D006839 2.1e-12 76.6 48 68.8
Medtr4g087280 Medicago truncatula HOM05D005198 ORTHO05D006839 2.1e-12 76.6 48 70.8
Nn1g09646 Nelumbo nucifera HOM05D005198 ORTHO05D006839 2.1e-12 76.6 48 70.8
GSVIVG01038139001 Vitis vinifera HOM05D005198 ORTHO05D006839 2.1e-12 76.6 48 70.8
Eucgr.H00311 Eucalyptus grandis HOM05D005198 ORTHO05D006839 2.7e-12 76.3 48 70.8
Lsat_1_v5_gn_9_61481 Lactuca sativa HOM05D005198 ORTHO05D006839 2.7e-12 76.3 47 70.2
SEGI_32957 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 2.7e-12 76.3 48 70.8
CDE04G2667 Ceratophyllum demersum HOM05D005198 ORTHO05D006839 3.5e-12 75.9 48 70.8
Lj3g0007177 Lotus japonicus HOM05D005198 ORTHO05D006839 4.6e-12 75.5 48 70.8
Lj6g0012253 Lotus japonicus HOM05D005198 ORTHO05D006839 4.6e-12 75.5 48 70.8
Sp5g28150 Schrenkiella parvula HOM05D005198 ORTHO05D006839 4.6e-12 75.5 47 70.2
Thecc.01G302200 Theobroma cacao HOM05D005198 ORTHO05D006839 4.6e-12 75.5 48 68.8
TPR.G23517 Trifolium pratense HOM05D005198 ORTHO05D006839 4.6e-12 75.5 48 68.8
Cpa.g.sc9.361 Carica papaya HOM05D005198 ORTHO05D006839 6.0e-12 75.1 47 70.2
Psat7g121400 Pisum sativum HOM05D005198 ORTHO05D006839 6.0e-12 75.1 48 68.8
AL2G32950 Arabidopsis lyrata HOM05D005198 ORTHO05D006839 1.0e-11 74.3 47 70.2
AT1G73180 Arabidopsis thaliana HOM05D005198 ORTHO05D006839 1.0e-11 74.3 47 70.2
CARHR066180 Cardamine hirsuta HOM05D005198 ORTHO05D006839 1.0e-11 74.3 47 70.2
Duzib151G0783 Durio zibethinus HOM05D005198 ORTHO05D006839 1.0e-11 74.3 48 68.8
Aa31LG4G3470 Aethionema arabicum HOM05D005198 ORTHO05D006839 1.3e-11 73.9 47 68.1
arahy.Tifrunner.gnm1.ann1.Q28JUU Arachis hypogaea HOM05D005198 ORTHO05D006839 1.3e-11 73.9 48 68.8
A07p29920 Brassica napus HOM05D005198 ORTHO05D006839 1.3e-11 73.9 47 68.1
C06p34190 Brassica napus HOM05D005198 ORTHO05D006839 1.3e-11 73.9 47 68.1
BolC6t38540H Brassica oleracea HOM05D005198 ORTHO05D006839 1.3e-11 73.9 47 68.1
BraA07t30630Z Brassica rapa HOM05D005198 ORTHO05D006839 1.3e-11 73.9 47 68.1
Carub.0002s1997 Capsella rubella HOM05D005198 ORTHO05D006839 1.3e-11 73.9 48 68.8
Lj1g0021010 Lotus japonicus HOM05D005198 ORTHO05D006839 1.3e-11 73.9 48 68.8
CANSAT11G2028 Cannabis sativa HOM05D005198 ORTHO05D006839 1.8e-11 73.6 48 66.7
Mapoly0011s0080 Marchantia polymorpha HOM05D005198 ORTHO05D006839 2.3e-11 73.2 48 68.8
Eucgr.L01724 Eucalyptus grandis HOM05D005198 ORTHO05D006839 3.0e-11 72.8 48 66.7
THA.LOC104813938 Tarenaya hassleriana HOM05D005198 ORTHO05D006839 3.9e-11 72.4 47 68.1
Gohir.D02G010200 Gossypium hirsutum HOM05D005198 ORTHO05D006839 5.1e-11 72.0 48 66.7
Gorai.005G012500 Gossypium raimondii HOM05D005198 ORTHO05D006839 5.1e-11 72.0 48 66.7
Gohir.A02G009975 Gossypium hirsutum HOM05D005198 ORTHO05D006839 6.7e-11 71.6 48 66.7
ATR0733G245 Amborella trichopoda HOM05D005198 ORTHO05D006839 8.7e-11 71.2 48 68.8
SGA_v2.0_scaffold12G06184 Striga asiatica HOM05D005198 ORTHO05D006839 8.7e-11 71.2 40 77.5
Thhalv10018413m.g Eutrema salsugineum HOM05D005198 ORTHO05D006839 1.1e-10 70.9 47 68.1
Hund03196 Selenicereus undatus HOM05D005198 ORTHO05D006839 1.1e-10 70.9 47 68.1
Ah.13g073540 Amaranthus hybridus HOM05D005198 ORTHO05D006839 1.9e-10 70.1 47 63.8
Hma1.2p1_0150F.1_g066860 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 4.3e-10 68.9 47 66.0
Hma1.2p1_0150F.1_g066870 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 4.3e-10 68.9 47 66.0
FAN23G1744 Fragaria x ananassa HOM05D005198 ORTHO05D006839 7.4e-10 68.2 48 64.6
CBR_g53754 Chara braunii HOM05D005198 ORTHO05D006839 1.3e-09 67.4 77 46.8
FAN19G2119 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.3e-09 67.4 48 64.6
vmacro09048 Vaccinium macrocarpon HOM05D005198 ORTHO05D006839 1.6e-09 67.0 50 60.0
AUR62002390 Chenopodium quinoa HOM05D005198 ORTHO05D006839 2.1e-09 66.6 47 63.8
AUR62023798 Chenopodium quinoa HOM05D005198 ORTHO05D006839 2.1e-09 66.6 47 63.8
Lalb_Chr16g0384471 Lupinus albus HOM05D005198 ORTHO05D006839 2.8e-09 66.2 41 70.7
MBI11_g23941_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 3.7e-09 65.9 41 70.7
Pp3c6_14240 Physcomitrium patens HOM05D005198 ORTHO05D006839 4.8e-09 65.5 48 58.3
unitig_92.g28214 Utricularia gibba HOM05D005198 ORTHO05D006839 1.1e-08 64.3 41 70.7
SMO145G0177 Selaginella moellendorffii HOM05D005198 ORTHO05D006839 1.4e-08 63.9 48 56.2
DCAR_027526 Daucus carota HOM05D005198 ORTHO05D006839 2.4e-08 63.2 46 60.9
SHI30329 Sapria himalayana HOM05D005198 ORTHO05D000023 4.0e-08 62.4 44 59.1
BcaC08g45664 Brassica carinata HOM05D005198 ORTHO05D006839 4.5e-07 58.9 38 65.8
Lsat_1_v5_gn_5_150841 Lactuca sativa HOM05D005198 ORTHO05D004031 4.5e-07 58.9 39 69.2
SGA_v2.0_scaffold54G19619 Striga asiatica HOM05D005198 ORTHO05D400672 8.4e-06 54.7 60 53.3


User provided reference genes

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