Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 1.6e-98 362.8 198 100.0
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 1.3e-60 236.9 197 71.1
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.3e-55 220.3 196 61.7
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 1.7e-55 219.9 196 63.8
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 3.8e-55 218.8 196 59.7
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 1.4e-54 216.9 195 63.6
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.9e-54 216.5 196 61.7
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 5.5e-54 214.9 195 64.1
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 5.5e-54 214.9 185 65.9
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 7.2e-54 214.5 181 69.6
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 1.2e-53 213.8 182 67.0
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 2.7e-53 212.6 214 62.1
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 3.5e-53 212.2 195 62.1
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 3.5e-53 212.2 195 62.6
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 3.5e-53 212.2 196 60.2
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 6.1e-53 211.5 196 60.2
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 1.3e-52 210.3 195 63.1
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 1.3e-52 210.3 198 60.1
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 3.0e-52 209.1 181 65.7
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 3.0e-52 209.1 195 62.1
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 3.9e-52 208.8 180 66.7
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 3.9e-52 208.8 175 69.1
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 6.7e-52 208.0 195 62.6
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 8.7e-52 207.6 151 74.2
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.1e-51 207.2 195 61.5
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 1.5e-51 206.8 183 66.7
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 1.9e-51 206.5 180 67.2
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 2.5e-51 206.1 195 61.0
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 3.3e-51 205.7 194 62.9
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 3.3e-51 205.7 197 60.4
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 5.7e-51 204.9 151 74.2
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 5.7e-51 204.9 195 61.5
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 7.4e-51 204.5 187 63.1
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 7.4e-51 204.5 180 63.9
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 7.4e-51 204.5 147 75.5
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 9.7e-51 204.1 197 61.4
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 9.7e-51 204.1 197 61.4
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 9.7e-51 204.1 197 61.4
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 9.7e-51 204.1 147 74.8
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 9.7e-51 204.1 195 61.5
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.6e-50 203.4 180 64.4
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 1.6e-50 203.4 195 60.5
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 2.2e-50 203.0 195 60.0
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 2.2e-50 203.0 196 59.7
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 3.7e-50 202.2 195 62.1
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 6.3e-50 201.4 163 69.9
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 6.3e-50 201.4 214 57.0
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 1.1e-49 200.7 195 61.0
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 1.4e-49 200.3 186 60.2
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 1.8e-49 199.9 149 74.5
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 1.8e-49 199.9 151 72.8
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 2.4e-49 199.5 196 58.7
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 3.1e-49 199.1 179 64.2
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 4.1e-49 198.7 194 57.7
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 5.3e-49 198.4 184 64.7
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 5.3e-49 198.4 194 60.3
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 1.2e-48 197.2 185 61.6
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 2.6e-48 196.1 196 57.7
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 3.4e-48 195.7 194 57.2
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 4.5e-48 195.3 250 51.6
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 4.5e-48 195.3 147 73.5
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 1.7e-47 193.4 186 60.2
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.2e-47 193.0 195 57.9
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 3.8e-47 192.2 165 65.5
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 6.5e-47 191.4 179 64.2
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 6.5e-47 191.4 189 60.8
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 8.5e-47 191.0 223 53.4
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.1e-46 190.7 196 56.6
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 1.4e-46 190.3 195 56.9
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 3.2e-46 189.1 153 68.0
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 3.2e-46 189.1 149 71.1
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 3.2e-46 189.1 186 59.1
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 4.2e-46 188.7 183 59.6
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 9.4e-46 187.6 147 69.4
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.2e-45 187.2 194 57.2
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 2.1e-45 186.4 179 59.8
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 3.6e-45 185.7 179 59.8
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 4.6e-45 185.3 179 58.7
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.6e-45 185.3 180 62.2
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 6.1e-45 184.9 194 56.2
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 6.1e-45 184.9 198 58.1
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.1e-45 184.9 198 57.1
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.1e-45 184.9 198 58.1
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 6.1e-45 184.9 147 70.1
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 7.9e-45 184.5 198 57.6
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 1.0e-44 184.1 198 57.1
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 1.0e-44 184.1 147 68.7
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 1.4e-44 183.7 147 67.3
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 1.4e-44 183.7 147 67.3
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 1.4e-44 183.7 147 67.3
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 1.4e-44 183.7 147 67.3
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 1.4e-44 183.7 147 68.0
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 1.8e-44 183.3 147 70.1
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 3.9e-44 182.2 191 57.1
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 8.8e-44 181.0 195 55.9
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 2.5e-43 179.5 158 63.3
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 7.4e-43 177.9 153 65.4
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 9.7e-43 177.6 212 52.4
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 9.7e-43 177.6 145 66.2
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 2.2e-42 176.4 194 54.6
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 2.2e-42 176.4 184 57.1
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 6.3e-42 174.9 179 56.4
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 9.1e-41 171.0 134 68.7
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 1.5e-40 170.2 172 57.6
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 1.3e-39 167.2 160 58.1
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 2.1e-37 159.8 186 54.8
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 6.7e-36 154.8 158 59.5
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 7.0e-33 144.8 136 61.8
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 4.2e-30 135.6 154 51.9
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 7.2e-30 134.8 140 57.1
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 4.7e-29 132.1 145 49.7
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 8.0e-29 131.3 143 52.4
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 1.0e-28 131.0 125 62.4
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 7.5e-27 124.8 136 58.8
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 2.2e-26 123.2 135 50.4
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 2.8e-26 122.9 128 56.2
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.4e-25 120.6 145 46.2
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 5.3e-25 118.6 198 42.4
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 7.0e-25 118.2 128 53.9
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 1.8e-20 103.6 104 52.9
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 5.4e-17 92.0 106 49.1
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 7.7e-16 88.2 75 61.3
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.0e-15 87.8 174 37.4
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.5e-08 62.4 92 45.7
Cre06.g256250 Chlamydomonas reinhardtii HOM05D006257 ORTHO05D007708 1.7e-07 60.5 207 30.4


User provided reference genes

Program Settings