Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold63G21825 Striga asiatica HOM05D009041 ORTHO05D010054 1.4e-92 342.8 163 100.0
SGA_v2.0_scaffold25G10890 Striga asiatica HOM05D009041 ORTHO05D010054 4.8e-56 221.5 125 84.8
SGA_v2.0_scaffold47G17570 Striga asiatica HOM05D009041 ORTHO05D010054 2.4e-55 219.2 125 83.2
SGA_v2.0_scaffold130G34321 Striga asiatica HOM05D009041 ORTHO05D010054 1.7e-32 143.3 107 60.7
SGA_v2.0_scaffold211G42151 Striga asiatica HOM05D009041 ORTHO05D010054 4.1e-31 138.7 109 58.7
SGA_v2.0_scaffold366G50039 Striga asiatica HOM05D009041 ORTHO05D010054 4.5e-30 135.2 94 61.7
SGA_v2.0_scaffold6G03390 Striga asiatica HOM05D009041 ORTHO05D010054 5.0e-29 131.7 103 54.4
SGA_v2.0_scaffold160G37740 Striga asiatica HOM05D009041 ORTHO05D010054 6.6e-29 131.3 129 46.5
SGA_v2.0_scaffold5G02531 Striga asiatica HOM05D009041 ORTHO05D010054 5.5e-28 128.3 104 55.8
SGA_v2.0_scaffold668G53413 Striga asiatica HOM05D009041 ORTHO05D010054 7.2e-28 127.9 115 50.4
SGA_v2.0_scaffold11G05825 Striga asiatica HOM05D009041 ORTHO05D010054 1.2e-27 127.1 104 54.8
SGA_v2.0_scaffold21G09437 Striga asiatica HOM05D009041 ORTHO05D010054 1.2e-27 127.1 91 60.4
SGA_v2.0_scaffold13G06721 Striga asiatica HOM05D009041 ORTHO05D010054 2.8e-27 125.9 96 55.2
SGA_v2.0_scaffold26G11342 Striga asiatica HOM05D009041 ORTHO05D010054 2.8e-27 125.9 96 55.2
SGA_v2.0_scaffold180G39666 Striga asiatica HOM05D000045 ORTHO05D010054 6.1e-27 124.8 110 53.6
SGA_v2.0_scaffold270G46313 Striga asiatica HOM05D009041 ORTHO05D010054 8.0e-27 124.4 89 62.9
SGA_v2.0_scaffold79G25579 Striga asiatica HOM05D009041 ORTHO05D010054 1.0e-26 124.0 107 51.4
SGA_v2.0_scaffold115G32155 Striga asiatica HOM05D009041 ORTHO05D010054 1.4e-26 123.6 106 51.9
SGA_v2.0_scaffold21G09336 Striga asiatica HOM05D009041 ORTHO05D010054 1.4e-26 123.6 100 55.0
SGA_v2.0_scaffold347G49563 Striga asiatica HOM05D009041 ORTHO05D010054 1.4e-26 123.6 112 50.9
SGA_v2.0_scaffold548G52852 Striga asiatica HOM05D009041 ORTHO05D010054 1.4e-26 123.6 106 51.9
SGA_v2.0_scaffold46G17333 Striga asiatica HOM05D009041 ORTHO05D010054 2.2e-24 116.3 81 59.3
SGA_v2.0_scaffold142G35653 Striga asiatica HOM05D009041 ORTHO05D010054 7.5e-17 91.3 79 55.7
SGA_v2.0_scaffold577G53016 Striga asiatica HOM05D009041 ORTHO05D010054 4.9e-16 88.6 74 56.8
SGA_v2.0_scaffold249G44954 Striga asiatica HOM05D009041 ORTHO05D010054 6.4e-16 88.2 65 56.9
SGA_v2.0_scaffold147G36271 Striga asiatica HOM05D009041 ORTHO05D010054 8.3e-16 87.8 60 61.7
SGA_v2.0_scaffold86G26862 Striga asiatica HOM05D000045 ORTHO05D010054 1.1e-15 87.4 76 50.0
SGA_v2.0_scaffold18G08321 Striga asiatica HOM05D009041 ORTHO05D010054 9.2e-15 84.3 78 48.7
TPR.G30322 Trifolium pratense HOM05D009041 ORTHO05D010054 6.0e-14 81.6 70 47.1
TPR.G33858 Trifolium pratense HOM05D001572 ORTHO05D000733 2.3e-13 79.7 111 36.9
SGA_v2.0_scaffold27G11549 Striga asiatica HOM05D009041 ORTHO05D010054 7.3e-12 74.7 94 41.5
SGA_v2.0_scaffold54G19493 Striga asiatica HOM05D009041 ORTHO05D010054 7.3e-12 74.7 59 50.8
EL10Ac2g02717 Beta vulgaris HOM05D000045 ORTHO05D000067 1.1e-10 70.9 82 40.2
EL10Ac3g06581 Beta vulgaris HOM05D000045 ORTHO05D000067 1.1e-10 70.9 82 40.2
EL10Ac6g13792 Beta vulgaris HOM05D000045 ORTHO05D000067 1.1e-10 70.9 82 40.2
EL10As3g23329 Beta vulgaris HOM05D000045 ORTHO05D000067 1.1e-10 70.9 82 40.2
HanXRQChr14g0449641 Helianthus annuus HOM05D000045 ORTHO05D000067 1.1e-10 70.9 70 47.1
Lj5g0021168 Lotus japonicus HOM05D000045 ORTHO05D000695 1.1e-10 70.9 78 48.7
EL10Ac6g14806 Beta vulgaris HOM05D000045 ORTHO05D000067 1.4e-10 70.5 82 40.2
EL10Ac5g11586 Beta vulgaris HOM05D000045 ORTHO05D000067 2.3e-10 69.7 77 41.6
ECA240G3819 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.1e-10 69.3 91 36.3
EL10Ac5g12499 Beta vulgaris HOM05D000045 ORTHO05D000067 4.0e-10 68.9 96 37.5
EL10Ac8g19696 Beta vulgaris HOM05D000045 ORTHO05D000067 4.0e-10 68.9 96 37.5
SGA_v2.0_scaffold309G48184 Striga asiatica HOM05D014716 ORTHO05D010054 5.2e-10 68.6 94 42.6
ECA232G1430 Erigeron canadensis HOM05D000045 ORTHO05D000695 2.6e-09 66.2 91 35.2
SGA_v2.0_scaffold108G30934 Striga asiatica HOM05D000045 ORTHO05D010054 2.6e-09 66.2 94 43.6
Hund03678 Selenicereus undatus HOM05D004088 ORTHO05D010054 3.4e-09 65.9 73 41.1
ECA248G3866 Erigeron canadensis HOM05D000045 ORTHO05D000067 5.8e-09 65.1 83 44.6
Hund10326 Selenicereus undatus HOM05D020589 ORTHO05D010054 7.5e-09 64.7 73 39.7
EL10Ac4g08992 Beta vulgaris HOM05D000045 ORTHO05D010054 9.8e-09 64.3 76 38.2
ECA233G1000 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.3e-08 63.9 73 39.7
Medtr6g060410 Medicago truncatula HOM05D009041 ORTHO05D010054 1.3e-08 63.9 66 48.5
Atru.chr4.2343 Acer truncatum HOM05D000045 ORTHO05D000067 4.9e-08 62.0 63 47.6
Atru.chr4.2354 Acer truncatum HOM05D000045 ORTHO05D000067 4.9e-08 62.0 63 47.6
EL10Ac5g11838 Beta vulgaris HOM05D000045 ORTHO05D010054 4.9e-08 62.0 106 34.9
EL10Ac7g17203 Beta vulgaris HOM05D000045 ORTHO05D010054 4.9e-08 62.0 78 38.5
EL10Ac8g19058 Beta vulgaris HOM05D000045 ORTHO05D010054 4.9e-08 62.0 78 41.0
EL10Ac8g19517 Beta vulgaris HOM05D000045 ORTHO05D010054 4.9e-08 62.0 78 41.0
EL10Ac2g03825 Beta vulgaris HOM05D000045 ORTHO05D010054 6.4e-08 61.6 106 35.8
EL10Ac4g09061 Beta vulgaris HOM05D010653 ORTHO05D013151 6.4e-08 61.6 106 35.8
EL10Ac6g15511 Beta vulgaris HOM05D000045 ORTHO05D010054 6.4e-08 61.6 106 35.8
EL10Ac8g19823 Beta vulgaris HOM05D000045 ORTHO05D010054 6.4e-08 61.6 106 35.8
EL10Ac9g21271 Beta vulgaris HOM05D000045 ORTHO05D010054 6.4e-08 61.6 106 35.8
EL10Ac9g22734 Beta vulgaris HOM05D000045 ORTHO05D010054 6.4e-08 61.6 106 35.8
Medtr4g080290 Medicago truncatula HOM05D009041 ORTHO05D010054 6.4e-08 61.6 66 47.0
ECA247G1397 Erigeron canadensis HOM05D000583 ORTHO05D000442 8.3e-08 61.2 112 31.2
SGA_v2.0_scaffold278G46733 Striga asiatica HOM05D009041 ORTHO05D010054 1.4e-07 60.5 66 47.0
EL10Ac1g02190 Beta vulgaris HOM05D000045 ORTHO05D010054 1.9e-07 60.1 106 34.9
Hund25812 Selenicereus undatus HOM05D000045 ORTHO05D010054 1.9e-07 60.1 65 40.0
Nn1g09624 Nelumbo nucifera HOM05D000045 ORTHO05D000611 2.4e-07 59.7 67 40.3
EL10Ac1g01865 Beta vulgaris HOM05D000045 ORTHO05D010054 3.2e-07 59.3 102 34.3
Hund31201 Selenicereus undatus HOM05D000045 ORTHO05D000067 3.2e-07 59.3 65 40.0
TPR.G36565 Trifolium pratense HOM05D009041 ORTHO05D010054 3.2e-07 59.3 62 51.6
EL10Ac1g01998 Beta vulgaris HOM05D000045 ORTHO05D010054 4.1e-07 58.9 77 37.7
ECA240G0952 Erigeron canadensis HOM05D000045 ORTHO05D000067 4.1e-07 58.9 93 33.3
ECA232G4828 Erigeron canadensis HOM05D000014 ORTHO05D000093 5.4e-07 58.5 119 31.1
Hund04144 Selenicereus undatus HOM05D000045 ORTHO05D000695 5.4e-07 58.5 111 32.4
FvH4_3g29141 Fragaria vesca HOM05D000045 ORTHO05D021070 7.1e-07 58.2 73 35.6
AUR62030095 Chenopodium quinoa HOM05D009508 ORTHO05D000695 9.2e-07 57.8 121 35.5
Lalb_Chr15g0087241 Lupinus albus HOM05D000045 ORTHO05D000067 1.2e-06 57.4 61 42.6
EL10Ac9g22455 Beta vulgaris HOM05D010653 ORTHO05D010054 1.6e-06 57.0 86 37.2
arahy.Tifrunner.gnm1.ann1.036Q5Z Arachis hypogaea HOM05D000045 ORTHO05D000067 2.1e-06 56.6 66 40.9
arahy.Tifrunner.gnm1.ann1.X31DKD Arachis hypogaea HOM05D000045 ORTHO05D000067 2.1e-06 56.6 66 40.9
Lj6C664T10 Lonicera japonica HOM05D000045 ORTHO05D000067 2.1e-06 56.6 61 41.0
Lalb_Chr20g0118301 Lupinus albus HOM05D000045 ORTHO05D000067 2.1e-06 56.6 61 41.0
AUR62037106 Chenopodium quinoa HOM05D009508 ORTHO05D000695 2.7e-06 56.2 121 34.7
Nitab4.5_0001192g0010 Nicotiana tabacum HOM05D000045 ORTHO05D000067 2.7e-06 56.2 61 41.0
Hund04370 Selenicereus undatus HOM05D000045 ORTHO05D000695 3.5e-06 55.8 60 41.7
Solyc05g009583.1 Solanum lycopersicum HOM05D000045 ORTHO05D000611 3.5e-06 55.8 67 38.8
TAR376G0491 Trochodendron aralioides HOM05D000045 ORTHO05D000067 3.5e-06 55.8 70 35.7
Lj4g0022113 Lotus japonicus HOM05D000045 ORTHO05D000067 4.6e-06 55.5 61 39.3
CiPaw.15G056200 Carya illinoinensis HOM05D000045 ORTHO05D000067 6.0e-06 55.1 62 43.5
Gohir.A09G231400 Gossypium hirsutum HOM05D000045 ORTHO05D000067 6.0e-06 55.1 61 37.7
Gohir.D09G232500 Gossypium hirsutum HOM05D000045 ORTHO05D000067 6.0e-06 55.1 61 37.7
Gorai.006G255400 Gossypium raimondii HOM05D000045 ORTHO05D000067 6.0e-06 55.1 61 37.7
Nn6g31599 Nelumbo nucifera HOM05D000045 ORTHO05D000067 6.0e-06 55.1 80 37.5
Solyc02g092170.1 Solanum lycopersicum HOM05D000045 ORTHO05D000611 6.0e-06 55.1 67 37.3
Solyc02g150118.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 6.0e-06 55.1 67 37.3
Solyc03g082435.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 6.0e-06 55.1 67 37.3
Solyc03g094125.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 6.0e-06 55.1 67 37.3
Solyc03g150148.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 6.0e-06 55.1 67 37.3
Solyc04g070995.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 6.0e-06 55.1 67 37.3
Solyc04g071265.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 6.0e-06 55.1 67 37.3
Solyc04g072045.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 6.0e-06 55.1 67 37.3
Solyc10g044585.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 6.0e-06 55.1 67 37.3
Solyc11g020215.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 6.0e-06 55.1 67 37.3
arahy.Tifrunner.gnm1.ann1.NRKY30 Arachis hypogaea HOM05D000045 ORTHO05D000611 7.8e-06 54.7 58 41.4
arahy.Tifrunner.gnm1.ann1.VV1Q05 Arachis hypogaea HOM05D000045 ORTHO05D000611 7.8e-06 54.7 58 41.4
ECA240G0528 Erigeron canadensis HOM05D000045 ORTHO05D000067 7.8e-06 54.7 83 33.7
Glyma.13G211200 Glycine max HOM05D000045 ORTHO05D000067 7.8e-06 54.7 61 39.3
Manes.15G020900 Manihot esculenta HOM05D000045 ORTHO05D000067 7.8e-06 54.7 61 37.7
Nn7g36622 Nelumbo nucifera HOM05D000045 ORTHO05D000611 7.8e-06 54.7 71 35.2
Nitab4.5_0008568g0050 Nicotiana tabacum HOM05D000045 ORTHO05D000067 7.8e-06 54.7 61 39.3
Peaxi162Scf00066g02121 Petunia axillaris HOM05D000045 ORTHO05D000611 7.8e-06 54.7 54 42.6
Peaxi162Scf00249g00025 Petunia axillaris HOM05D000045 ORTHO05D000611 7.8e-06 54.7 54 42.6
Peaxi162Scf00769g00012 Petunia axillaris HOM05D000045 ORTHO05D000067 7.8e-06 54.7 61 41.0
Hund09722 Selenicereus undatus HOM05D020589 ORTHO05D010054 7.8e-06 54.7 48 43.8


User provided reference genes

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