Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold63G21813 Striga asiatica HOM05D005191 ORTHO05D006725 0.0e+00 1454.9 731 100.0
Migut.K00420 Erythranthe guttata HOM05D005191 ORTHO05D006725 0.0e+00 1178.7 731 78.8
MSTRG.26350 Avicennia marina HOM05D005191 ORTHO05D006725 0.0e+00 1177.5 731 79.5
Sopen07g001100 Solanum pennellii HOM05D005191 ORTHO05D006725 6.0e-308 1060.4 731 70.7
CiPaw.03G249200 Carya illinoinensis HOM05D005191 ORTHO05D006725 2.2e-302 1042.0 731 69.4
QL02p090053 Quercus lobata HOM05D005191 ORTHO05D006725 1.1e-301 1039.6 723 70.7
CSS0021683 Camellia sinensis var. sinensis HOM05D005191 ORTHO05D006725 5.5e-301 1037.3 739 70.0
CAN.G1663.1 Capsicum annuum HOM05D005191 ORTHO05D006725 9.3e-301 1036.6 731 69.4
Cfa002299 Carpinus fangiana HOM05D005191 ORTHO05D006725 4.3e-298 1027.7 731 69.5
Cc06_g08000 Coffea canephora HOM05D005191 ORTHO05D006725 4.3e-298 1027.7 723 70.3
Cc06_g08010 Coffea canephora HOM05D005191 ORTHO05D006725 4.3e-298 1027.7 723 70.3
Nitab4.5_0000374g0090 Nicotiana tabacum HOM05D005191 ORTHO05D006725 6.3e-297 1023.8 703 70.6
Lj7A435G51 Lonicera japonica HOM05D005191 ORTHO05D006725 1.0e-294 1016.5 732 68.3
Thecc.09G133700 Theobroma cacao HOM05D005191 ORTHO05D006725 2.2e-294 1015.4 712 70.2
Solyc07g007810.3 Solanum lycopersicum HOM05D005191 ORTHO05D006725 2.9e-294 1015.0 731 68.5
Gohir.A08G088900 Gossypium hirsutum HOM05D005191 ORTHO05D006725 3.6e-292 1008.1 733 67.4
Gorai.004G107900 Gossypium raimondii HOM05D005191 ORTHO05D006725 5.1e-291 1004.2 732 67.2
Prupe.7G249300 Prunus persica HOM05D005191 ORTHO05D006725 1.7e-289 999.2 729 67.8
Rhsim03G0251800 Rhododendron simsii HOM05D005191 ORTHO05D006725 1.4e-288 996.1 770 65.7
ECA236G3625 Erigeron canadensis HOM05D005191 ORTHO05D006725 7.7e-287 990.3 710 67.6
TAR625G1134 Trochodendron aralioides HOM05D005191 ORTHO05D006725 3.8e-286 988.0 732 68.3
Peaxi162Scf00088g01225 Petunia axillaris HOM05D005191 ORTHO05D006725 6.5e-286 987.3 712 68.3
Ciclev10007583m.g Citrus clementina HOM05D005191 ORTHO05D006725 3.2e-285 984.9 731 66.3
Lsat_1_v5_gn_8_61061 Lactuca sativa HOM05D005191 ORTHO05D006725 3.2e-285 984.9 696 68.7
CANSAT11G2540 Cannabis sativa HOM05D005191 ORTHO05D006725 2.1e-284 982.2 726 66.3
MD02G1022800 Malus domestica HOM05D005191 ORTHO05D006725 2.1e-284 982.2 712 68.3
Potri.006G065000 Populus trichocarpa HOM05D005191 ORTHO05D006725 7.9e-284 980.3 715 68.1
TWI63G0111 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 3.0e-283 978.4 724 66.0
RcHm_v2.0_Chr2g0087561 Rosa chinensis HOM05D005191 ORTHO05D006725 5.1e-283 977.6 721 66.4
MD15G1165500 Malus domestica HOM05D005191 ORTHO05D006725 2.6e-282 975.3 725 67.0
COL.COLO4_15579 Corchorus olitorius HOM05D005191 ORTHO05D006725 1.4e-280 969.5 732 66.0
HanXRQChr05g0143851 Helianthus annuus HOM05D005191 ORTHO05D006725 2.6e-279 965.3 734 64.9
FvH4_1g02530 Fragaria vesca HOM05D005191 ORTHO05D006725 1.3e-278 963.0 723 65.3
FAN19G1407 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.2e-278 962.2 723 65.3
FAN28G1162 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.5e-277 958.7 717 65.6
TWI32G0152 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 1.2e-276 956.4 727 64.5
FAN23G0864 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.6e-276 956.1 731 64.4
FAN26G1428 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.1e-276 955.7 732 64.3
Aqoxy7G02403 Aquilegia oxysepala HOM05D005191 ORTHO05D006725 4.7e-276 954.5 705 67.0
Nn2g12129 Nelumbo nucifera HOM05D005191 ORTHO05D006725 1.8e-275 952.6 713 67.2
Glyma.17G110600 Glycine max HOM05D005191 ORTHO05D006725 3.0e-275 951.8 712 66.0
Sed0022210 Sechium edule HOM05D005191 ORTHO05D006725 5.2e-275 951.0 716 65.1
Sc18g0000280 Simmondsia chinensis HOM05D005191 ORTHO05D006725 2.6e-274 948.7 711 66.1
Potri.018G125171 Populus trichocarpa HOM05D005191 ORTHO05D006725 3.3e-274 948.3 715 66.3
Lalb_Chr12g0198261 Lupinus albus HOM05D005191 ORTHO05D006725 9.7e-274 946.8 712 66.0
Potri.T124807 Populus trichocarpa HOM05D005191 ORTHO05D006725 3.7e-273 944.9 715 66.0
Gohir.D08G100100 Gossypium hirsutum HOM05D005191 ORTHO05D006725 2.4e-272 942.2 688 67.0
CsaV3_1G027890 Cucumis sativus L. HOM05D005191 ORTHO05D006725 2.6e-271 938.7 732 63.9
Eucgr.E03534 Eucalyptus grandis HOM05D005191 ORTHO05D006725 5.9e-271 937.6 723 64.9
Glyma.13G160800 Glycine max HOM05D005191 ORTHO05D006725 5.0e-270 934.5 713 65.2
THA.LOC104826555 Tarenaya hassleriana HOM05D005191 ORTHO05D006725 5.0e-270 934.5 713 63.7
PSO170G6846 Papaver somniferum HOM05D005191 ORTHO05D006725 1.1e-269 933.3 705 65.7
Cpa.g.sc46.51 Carica papaya HOM05D005191 ORTHO05D006725 2.5e-269 932.2 731 63.9
PSO017G2350 Papaver somniferum HOM05D005191 ORTHO05D006725 2.5e-269 932.2 705 65.7
Phvul.003G169500 Phaseolus vulgaris HOM05D005191 ORTHO05D006725 3.2e-269 931.8 712 64.9
VMungo1215G2132 Vigna mungo HOM05D005191 ORTHO05D006725 3.0e-267 925.2 717 64.2
Lj4g0015768 Lotus japonicus HOM05D005191 ORTHO05D006725 1.7e-265 919.5 728 63.7
arahy.Tifrunner.gnm1.ann1.0L2UMW Arachis hypogaea HOM05D005191 ORTHO05D006725 6.3e-265 917.5 731 62.8
Sabra18G0106500 Salix brachista HOM05D005191 ORTHO05D006725 1.8e-264 916.0 739 62.7
AUR62013300 Chenopodium quinoa HOM05D005191 ORTHO05D006725 7.0e-264 914.1 737 62.3
arahy.Tifrunner.gnm1.ann1.W0WM15 Arachis hypogaea HOM05D005191 ORTHO05D006725 1.6e-263 912.9 731 62.7
Nitab4.5_0005159g0010 Nicotiana tabacum HOM05D005191 ORTHO05D006725 1.9e-261 906.0 616 70.5
Manes.06G046300 Manihot esculenta HOM05D005191 ORTHO05D006725 1.6e-260 902.9 716 62.6
Dinv41468 Davidia involucrata HOM05D005191 ORTHO05D006725 2.7e-260 902.1 604 74.5
Duzib150G0407 Durio zibethinus HOM05D005191 ORTHO05D006725 8.0e-260 900.6 738 62.7
ClCG06G011590 Citrullus lanatus HOM05D005191 ORTHO05D006725 1.2e-258 896.7 784 59.2
Psat4g036440 Pisum sativum HOM05D005191 ORTHO05D006725 3.1e-256 888.6 717 62.1
Hund26552 Selenicereus undatus HOM05D005191 ORTHO05D006725 2.1e-252 875.9 732 61.7
TPR.G7618 Trifolium pratense HOM05D005191 ORTHO05D006725 1.8e-251 872.8 689 63.3
SalBow1G1849 Salvia bowleyana HOM05D005191 ORTHO05D006725 1.5e-250 869.8 624 69.7
DCAR_009327 Daucus carota HOM05D005191 ORTHO05D006725 7.5e-250 867.5 722 62.2
EL10Ac8g18733 Beta vulgaris HOM05D005191 ORTHO05D006725 1.3e-249 866.7 844 54.9
PGR142G3543 Punica granatum HOM05D005191 ORTHO05D006725 1.3e-241 840.1 711 60.3
AUR62011184 Chenopodium quinoa HOM05D005191 ORTHO05D006725 1.7e-241 839.7 748 58.2
Actinidia26371 Actinidia chinensis HOM05D005191 ORTHO05D006725 4.9e-241 838.2 719 60.2
A06p26710 Brassica napus HOM05D005191 ORTHO05D006725 2.4e-240 835.9 713 59.2
Sp3g26260 Schrenkiella parvula HOM05D005191 ORTHO05D006725 1.0e-238 830.5 713 58.3
Aa31LG8G12200 Aethionema arabicum HOM05D005191 ORTHO05D006725 2.1e-236 822.8 713 57.9
BcaC01g02222 Brassica carinata HOM05D005191 ORTHO05D006725 2.1e-236 822.8 739 56.8
C03p67700 Brassica napus HOM05D005191 ORTHO05D006725 2.1e-236 822.8 739 56.8
BcaB02g10775 Brassica carinata HOM05D005191 ORTHO05D006725 8.1e-236 820.8 714 58.3
Carub.0003s2755 Capsella rubella HOM05D005191 ORTHO05D006725 6.8e-235 817.8 715 57.8
AL3G44790 Arabidopsis lyrata HOM05D005191 ORTHO05D006725 2.0e-234 816.2 720 57.5
AT2G11000 Arabidopsis thaliana HOM05D005191 ORTHO05D006725 2.0e-234 816.2 720 57.8
BolSC21t60229H Brassica oleracea HOM05D005191 ORTHO05D006725 5.8e-234 814.7 738 56.6
Atru.chr7.1956 Acer truncatum HOM05D005191 ORTHO05D006725 5.2e-227 791.6 533 71.3
BraA06t25606Z Brassica rapa HOM05D005191 ORTHO05D006725 1.6e-223 780.0 754 54.6
ATR0800G098 Amborella trichopoda HOM05D005191 ORTHO05D006725 3.5e-223 778.9 663 59.7
Medtr4g115450 Medicago truncatula HOM05D005191 ORTHO05D006725 1.1e-219 767.3 633 60.8
MELO3C010304.2 Cucumis melo HOM05D005191 ORTHO05D006725 6.6e-206 721.5 749 52.7
Oeu052176.1 Olea europaea HOM05D005191 ORTHO05D006725 2.5e-205 719.5 474 74.7
SEGI_14008 Sequoiadendron giganteum HOM05D005191 ORTHO05D006725 2.1e-191 673.3 727 51.0
Thhalv10022576m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 2.7e-191 672.9 611 56.5
GSVIVG01015604001 Vitis vinifera HOM05D005191 ORTHO05D006725 3.7e-188 662.5 475 68.4
vmacro06157 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 5.7e-181 638.6 456 68.6
Ah.14g079340 Amaranthus hybridus HOM05D005191 ORTHO05D006725 5.3e-171 605.5 470 61.5
Mapoly0005s0239 Marchantia polymorpha HOM05D005191 ORTHO05D006725 5.2e-166 589.0 746 44.9
CARHR104890 Cardamine hirsuta HOM05D005191 ORTHO05D006725 5.7e-165 585.5 452 63.1
HPP92_010843 Vanilla planifolia HOM05D005191 ORTHO05D006725 1.6e-162 577.4 449 62.6
Pp3c26_8550 Physcomitrium patens HOM05D005191 ORTHO05D006725 7.2e-160 568.5 735 43.1
unitig_0.g2715 Utricularia gibba HOM05D005191 ORTHO05D006725 3.7e-156 556.2 413 67.6
Hund26401 Selenicereus undatus HOM05D005191 ORTHO05D006725 2.4e-155 553.5 482 59.3
Haze_25489 Corylus avellana HOM05D005191 ORTHO05D006725 2.7e-146 523.5 454 60.6
Ca_21665_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 9.5e-144 515.0 397 64.0
AagrBONN_evm.TU.Sc2ySwM_344.2372 Anthoceros agrestis HOM05D005191 ORTHO05D006725 1.4e-142 511.1 687 42.4
Zm00001eb192130 Zea mays HOM05D005191 ORTHO05D006725 1.5e-141 507.7 416 60.1
Haze_25491 Corylus avellana HOM05D005191 ORTHO05D006725 2.0e-130 470.7 382 63.4
Os02g0803250 Oryza sativa ssp. japonica HOM05D005191 ORTHO05D006725 5.8e-125 452.6 689 40.1
CBR_g29413 Chara braunii HOM05D005191 ORTHO05D006725 8.9e-118 428.7 755 37.0
SMO174G0034 Selaginella moellendorffii HOM05D005191 ORTHO05D006725 1.9e-115 421.0 743 37.4
Sabra06G0047500 Salix brachista HOM05D005191 ORTHO05D006725 1.0e-105 388.7 309 63.4
Ca_06948_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 1.7e-105 387.9 328 59.5
CDE05G1862 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 2.5e-104 384.0 370 55.7
Actinidia38723 Actinidia chinensis HOM05D005191 ORTHO05D006725 3.6e-103 380.2 296 64.9
GSVIVG01002648001 Vitis vinifera HOM05D005191 ORTHO05D006725 8.2e-79 299.3 184 76.6
vmacro06156 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 1.4e-70 271.9 246 57.7
Psat6g224720 Pisum sativum HOM05D005191 ORTHO05D006725 2.2e-68 264.6 198 63.6
unitig_0.g2716 Utricularia gibba HOM05D005191 ORTHO05D006725 1.8e-49 201.8 150 66.0
FAN06G0842 Fragaria x ananassa HOM05D005191 ORTHO05D006725 6.5e-44 183.3 339 38.6
Rhsim13G0106800 Rhododendron simsii HOM05D005191 ORTHO05D006725 7.2e-43 179.9 143 67.1
Nitab4.5_0005159g0020 Nicotiana tabacum HOM05D005191 ORTHO05D006725 1.7e-39 168.7 116 72.4
Actinidia38722 Actinidia chinensis HOM05D005191 ORTHO05D006725 2.0e-37 161.8 161 50.3
TPR.G8947 Trifolium pratense HOM05D005191 ORTHO05D006725 3.2e-35 154.5 102 71.6
CDE05G1976 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 7.2e-35 153.3 159 49.1
PRCOL_00001705 Prasinoderma coloniale HOM05D005191 ORTHO05D006725 4.1e-30 137.5 543 26.0
FAN06G5005 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.0e-25 122.9 268 33.6
RcHm_v2.0_Chr5g0051701 Rosa chinensis HOM05D005191 ORTHO05D006725 1.0e-25 122.9 123 49.6
Cre06.g300650 Chlamydomonas reinhardtii HOM05D005191 ORTHO05D006725 1.2e-24 119.4 591 23.7
FvH4_7g23890 Fragaria vesca HOM05D005191 ORTHO05D006725 4.1e-22 110.9 143 42.7
FAN10G4062 Fragaria x ananassa HOM05D005191 ORTHO05D006725 4.1e-22 110.9 124 49.2
FAN26G2291 Fragaria x ananassa HOM05D005191 ORTHO05D006725 7.3e-19 100.1 89 57.3
FAN10G2766 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.2e-18 99.4 84 60.7
MBI13_g29624_MAGBIO Magnolia biondii HOM05D005191 ORTHO05D006725 2.8e-18 98.2 64 67.2
Rhsim05G0138400 Rhododendron simsii HOM05D005191 ORTHO05D006725 2.6e-16 91.7 115 52.2
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 7.5e-16 90.1 74 56.8
Rhsim10G0150400 Rhododendron simsii HOM05D005191 ORTHO05D030537 6.0e-13 80.5 51 78.4
COL.COLO4_23752 Corchorus olitorius HOM05D005191 ORTHO05D016248 2.8e-10 71.6 59 59.3
COL.COLO4_21409 Corchorus olitorius HOM05D005191 ORTHO05D016248 2.3e-09 68.6 56 60.7
Thhalv10022959m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 1.5e-08 65.9 100 38.0
FvH4_1g29180 Fragaria vesca HOM05D005191 ORTHO05D025363 2.6e-08 65.1 51 56.9
GSVIVG01012804001 Vitis vinifera HOM05D005191 ORTHO05D006725 1.3e-07 62.8 66 53.0
Sp3g26280 Schrenkiella parvula HOM05D005191 ORTHO05D012938 8.3e-07 60.1 46 60.9


User provided reference genes

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