Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold63G21783 Striga asiatica HOM05D009108 ORTHO05D011557 0.0e+00 1275.8 687 100.0
Os03g0276850 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 3.2e-77 293.9 451 47.2
SGA_v2.0_scaffold75G24939 Striga asiatica HOM05D009108 ORTHO05D011557 6.8e-43 179.9 475 33.5
Os03g0821150 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 1.6e-39 168.7 200 48.5
FAN01G2174 Fragaria x ananassa HOM05D009108 ORTHO05D011557 3.5e-39 167.5 354 35.3
SGA_v2.0_scaffold126G33799 Striga asiatica HOM05D009108 ORTHO05D011557 3.0e-35 154.5 236 41.1
SGA_v2.0_scaffold151G36752 Striga asiatica HOM05D018498 ORTHO05D011557 2.0e-34 151.8 106 71.7
SGA_v2.0_scaffold170G38839 Striga asiatica HOM05D009108 ORTHO05D011557 1.6e-31 142.1 251 38.2
Nitab4.5_0002700g0230 Nicotiana tabacum HOM05D009108 ORTHO05D011557 9.5e-29 132.9 172 38.4
SGA_v2.0_scaffold1030G53801 Striga asiatica HOM05D009108 ORTHO05D011557 2.3e-27 128.3 233 38.6
SGA_v2.0_scaffold170G38837 Striga asiatica HOM05D009108 ORTHO05D011557 8.9e-27 126.3 217 40.1
SGA_v2.0_scaffold84G26526 Striga asiatica HOM05D018498 ORTHO05D000006 7.5e-18 96.7 57 77.2
SGA_v2.0_scaffold165G38213 Striga asiatica HOM05D018498 ORTHO05D011557 2.2e-17 95.1 50 84.0
Os12g0569800 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 5.4e-16 90.5 232 33.6
Nitab4.5_0001190g0020 Nicotiana tabacum HOM05D009108 ORTHO05D011557 1.1e-13 82.8 204 28.4
Hma1.2p1_1829F.1_g304550 Hydrangea macrophylla HOM05D009108 ORTHO05D011557 7.3e-13 80.1 148 31.8
Nitab4.5_0009884g0010 Nicotiana tabacum HOM05D009108 ORTHO05D011557 9.5e-13 79.7 205 27.8
SGA_v2.0_scaffold223G42904 Striga asiatica HOM05D018498 ORTHO05D011557 9.5e-13 79.7 57 61.4
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 1.4e-11 75.9 87 37.9
SGA_v2.0_scaffold257G45673 Striga asiatica HOM05D009108 ORTHO05D011557 2.3e-11 75.1 94 43.6
SGA_v2.0_scaffold80G25964 Striga asiatica HOM05D011272 ORTHO05D010636 5.2e-11 73.9 89 36.0
SGA_v2.0_scaffold13G06590 Striga asiatica HOM05D011272 ORTHO05D010636 6.8e-11 73.6 99 36.4
SGA_v2.0_scaffold5G03062 Striga asiatica HOM05D011272 ORTHO05D010636 1.2e-10 72.8 86 37.2
Os02g0115950 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 1.5e-10 72.4 142 31.0
SGA_v2.0_scaffold2392G54112 Striga asiatica HOM05D000003 ORTHO05D000006 1.5e-10 72.4 84 42.9
SGA_v2.0_scaffold123G33386 Striga asiatica HOM05D011272 ORTHO05D010636 2.0e-10 72.0 87 39.1
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 2.0e-10 72.0 89 40.4
SGA_v2.0_scaffold37G14870 Striga asiatica HOM05D011272 ORTHO05D010636 2.0e-10 72.0 88 39.8
SGA_v2.0_scaffold93G28364 Striga asiatica HOM05D009140 ORTHO05D010636 4.4e-10 70.9 83 36.1
SGA_v2.0_scaffold367G50060 Striga asiatica HOM05D000003 ORTHO05D010636 2.9e-09 68.2 96 40.6
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 3.8e-09 67.8 86 39.5
SGA_v2.0_scaffold450G51801 Striga asiatica HOM05D011272 ORTHO05D010636 4.9e-09 67.4 88 37.5
SGA_v2.0_scaffold53G19333 Striga asiatica HOM05D009140 ORTHO05D010636 1.9e-08 65.5 86 34.9
SGA_v2.0_scaffold283G46986 Striga asiatica HOM05D000003 ORTHO05D010636 2.4e-08 65.1 85 40.0
SGA_v2.0_scaffold203G41506 Striga asiatica HOM05D015799 ORTHO05D010636 3.2e-08 64.7 82 35.4
SGA_v2.0_scaffold231G43436 Striga asiatica HOM05D015799 ORTHO05D010636 4.1e-08 64.3 82 35.4
SGA_v2.0_scaffold11G05618 Striga asiatica HOM05D011272 ORTHO05D010636 9.2e-08 63.2 87 36.8
SGA_v2.0_scaffold83G26455 Striga asiatica HOM05D000003 ORTHO05D010636 1.2e-07 62.8 88 37.5
SGA_v2.0_scaffold231G43406 Striga asiatica HOM05D000024 ORTHO05D000006 1.6e-07 62.4 84 33.3
SGA_v2.0_scaffold56G19898 Striga asiatica HOM05D000003 ORTHO05D010636 1.6e-07 62.4 87 37.9
EL10Ac2g04519 Beta vulgaris HOM05D024015 ORTHO05D027007 2.1e-07 62.0 99 36.4
SGA_v2.0_scaffold72G24192 Striga asiatica HOM05D026623 ORTHO05D403235 2.1e-07 62.0 96 34.4
SGA_v2.0_scaffold206G41847 Striga asiatica HOM05D000254 ORTHO05D010636 2.7e-07 61.6 81 38.3
SGA_v2.0_scaffold16G07865 Striga asiatica HOM05D000341 ORTHO05D001197 3.5e-07 61.2 88 35.2
SGA_v2.0_scaffold40G15570 Striga asiatica HOM05D009108 ORTHO05D011557 3.5e-07 61.2 37 75.7
SGA_v2.0_scaffold244G44341 Striga asiatica HOM05D000003 ORTHO05D000004 6.0e-07 60.5 91 31.9
SGA_v2.0_scaffold6G03466 Striga asiatica HOM05D000003 ORTHO05D000004 7.8e-07 60.1 87 36.8
SGA_v2.0_scaffold34G13687 Striga asiatica HOM05D011272 ORTHO05D010636 1.0e-06 59.7 79 35.4
SGA_v2.0_scaffold179G39541 Striga asiatica HOM05D023122 ORTHO05D010636 1.3e-06 59.3 79 36.7
SGA_v2.0_scaffold163G37969 Striga asiatica HOM05D000003 ORTHO05D000004 1.7e-06 58.9 92 34.8
SGA_v2.0_scaffold10G05079 Striga asiatica HOM05D000003 ORTHO05D000004 2.3e-06 58.5 88 33.0
SGA_v2.0_scaffold13G06616 Striga asiatica HOM05D015799 ORTHO05D010636 2.3e-06 58.5 79 36.7
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 3.9e-06 57.8 88 34.1
SGA_v2.0_scaffold484G52346 Striga asiatica HOM05D000003 ORTHO05D010636 3.9e-06 57.8 97 39.2
SGA_v2.0_scaffold11G05675 Striga asiatica HOM05D023122 ORTHO05D010636 5.1e-06 57.4 97 33.0
SGA_v2.0_scaffold12G06017 Striga asiatica HOM05D009140 ORTHO05D010636 8.6e-06 56.6 77 35.1


User provided reference genes

Program Settings