Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 0.0e+00 1117.4 584 100.0
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 0.0e+00 1116.3 584 99.8
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 1.6e-266 922.5 488 92.8
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 3.0e-265 918.3 488 92.2
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 3.0e-265 918.3 491 91.4
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 3.0e-265 918.3 488 92.8
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 1.2e-263 912.9 488 91.8
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 8.1e-263 910.2 488 91.8
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 1.4e-262 909.4 487 91.2
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 2.3e-262 908.7 489 90.4
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 3.1e-262 908.3 489 89.6
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 5.2e-262 907.5 486 90.1
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 6.8e-262 907.1 486 90.1
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 6.8e-262 907.1 487 91.0
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 8.9e-262 906.7 485 90.3
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 8.9e-262 906.7 488 90.6
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 8.9e-262 906.7 488 90.6
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 1.2e-261 906.4 486 91.6
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 1.2e-261 906.4 485 91.8
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 1.5e-261 906.0 485 91.8
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 1.5e-261 906.0 480 91.5
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 2.0e-261 905.6 486 88.7
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 2.6e-261 905.2 488 90.4
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 3.4e-261 904.8 486 89.7
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 4.4e-261 904.4 488 91.0
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 5.8e-261 904.0 485 90.9
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 5.8e-261 904.0 486 89.7
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 5.8e-261 904.0 486 91.6
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 9.9e-261 903.3 483 90.9
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 1.7e-260 902.5 485 90.1
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.7e-260 902.5 488 90.4
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 2.2e-260 902.1 486 90.1
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 2.2e-260 902.1 486 90.1
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 2.9e-260 901.7 486 89.5
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 3.7e-260 901.4 486 91.4
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 3.7e-260 901.4 486 90.9
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 3.7e-260 901.4 486 90.9
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 4.9e-260 901.0 486 91.2
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 4.9e-260 901.0 488 91.4
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 6.4e-260 900.6 486 90.9
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 6.4e-260 900.6 486 91.4
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 8.3e-260 900.2 486 88.9
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 8.3e-260 900.2 486 91.6
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.1e-259 899.8 488 90.2
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 1.1e-259 899.8 489 90.8
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 1.4e-259 899.4 486 90.9
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.4e-259 899.4 486 88.7
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 1.4e-259 899.4 486 89.5
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 1.9e-259 899.0 486 91.2
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 1.9e-259 899.0 486 90.9
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 4.1e-259 897.9 480 90.4
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 4.1e-259 897.9 483 89.4
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 4.1e-259 897.9 489 90.8
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 7.1e-259 897.1 487 89.7
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 9.2e-259 896.7 486 89.9
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.2e-258 896.3 483 91.1
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 1.6e-258 896.0 485 89.3
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 2.1e-258 895.6 488 88.7
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 2.7e-258 895.2 486 88.9
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 2.7e-258 895.2 486 89.9
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 3.5e-258 894.8 486 91.8
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 3.5e-258 894.8 480 90.0
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 3.5e-258 894.8 486 89.5
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 3.5e-258 894.8 488 89.5
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 4.6e-258 894.4 483 91.1
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 6.0e-258 894.0 486 89.3
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 6.0e-258 894.0 488 90.8
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 7.8e-258 893.6 487 89.1
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 7.8e-258 893.6 486 90.5
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 1.0e-257 893.3 486 90.5
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 1.3e-257 892.9 485 91.1
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 2.3e-257 892.1 486 87.7
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 3.0e-257 891.7 483 88.8
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 3.0e-257 891.7 480 89.2
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 8.6e-257 890.2 483 88.8
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 8.6e-257 890.2 480 89.2
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 1.1e-256 889.8 482 88.6
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 1.5e-256 889.4 486 89.3
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 1.5e-256 889.4 486 89.5
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 2.5e-256 888.6 486 87.4
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 2.5e-256 888.6 487 91.4
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 4.3e-256 887.9 486 88.3
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 4.3e-256 887.9 486 88.5
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 7.3e-256 887.1 486 87.7
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 9.5e-256 886.7 485 89.5
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 9.5e-256 886.7 484 88.6
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 1.2e-255 886.3 484 88.4
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 2.1e-255 885.6 486 88.1
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 2.8e-255 885.2 486 87.4
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 6.2e-255 884.0 480 88.8
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 1.1e-254 883.2 461 93.3
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 1.8e-254 882.5 479 89.4
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 2.4e-254 882.1 480 89.6
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 2.4e-254 882.1 491 88.0
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 5.2e-254 880.9 486 88.9
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 8.9e-254 880.2 480 88.5
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 1.5e-253 879.4 480 89.2
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 1.5e-253 879.4 479 88.7
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 1.5e-253 879.4 461 93.5
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 3.4e-253 878.2 484 88.0
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 3.4e-253 878.2 480 88.3
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 7.6e-253 877.1 436 94.3
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 2.9e-252 875.2 489 90.4
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 8.4e-252 873.6 480 89.8
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 1.1e-251 873.2 473 88.6
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 1.4e-251 872.8 436 93.3
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 5.1e-249 864.4 460 91.1
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 2.1e-247 859.0 436 92.2
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 4.0e-246 854.7 482 86.3
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 3.4e-245 851.7 481 86.5
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 2.2e-244 849.0 478 83.9
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 4.9e-244 847.8 459 90.8
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 1.4e-243 846.3 481 83.6
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 3.9e-241 838.2 438 90.0
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 2.8e-239 832.0 432 89.1
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 2.0e-237 825.9 430 89.3
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 2.2e-236 822.4 409 95.1
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 6.4e-236 820.8 407 94.6
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 1.9e-235 819.3 407 94.3
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 1.8e-233 812.8 403 94.3
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 6.7e-233 810.8 402 94.3
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 5.8e-229 797.7 435 85.7
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 2.1e-226 789.3 400 99.2
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 1.2e-221 773.5 386 94.6
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 2.6e-221 772.3 487 78.6
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 2.1e-218 762.7 427 82.4
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 1.8e-217 759.6 421 82.2
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 3.0e-217 758.8 429 82.1
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 2.4e-206 722.6 408 85.3
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.2e-202 710.3 393 87.0
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 1.7e-199 699.9 480 75.4
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.5e-187 660.2 346 89.6
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 6.8e-185 651.4 395 75.2
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 5.7e-176 621.7 317 92.1
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.2e-175 619.8 486 68.5
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 4.1e-166 589.0 487 66.1
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 5.4e-166 588.6 486 66.3
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 1.6e-165 587.0 331 88.2
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 5.6e-163 578.6 486 65.6
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.3e-145 520.0 279 87.1
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 2.7e-141 506.5 351 72.4
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 4.2e-126 456.1 276 75.7
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 3.4e-112 409.8 203 94.1
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 4.3e-99 366.3 177 94.9
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 2.6e-96 357.1 191 86.9
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.4e-92 344.7 174 93.7
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.7e-90 337.8 170 92.4
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 3.3e-83 313.5 493 42.2
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 2.6e-75 287.3 146 90.4
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 2.8e-66 257.3 146 83.6
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 3.7e-66 256.9 129 96.1
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 3.5e-64 250.4 162 81.5
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 1.3e-63 248.4 127 89.8
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 2.7e-56 224.2 147 82.3
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 3.3e-54 217.2 259 44.8
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 3.7e-50 203.8 100 93.0
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.3e-47 195.3 102 89.2
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 6.2e-45 186.4 127 76.4
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 6.2e-37 159.8 102 78.4
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 2.9e-34 151.0 76 94.7
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 2.9e-34 151.0 76 94.7
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 1.0e-31 142.5 108 64.8
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 1.4e-28 132.1 197 37.1
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 4.0e-28 130.6 68 94.1
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.5e-27 128.6 70 87.1
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.7e-26 124.0 65 89.2
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.7e-26 124.0 65 89.2
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 4.9e-26 123.6 65 89.2
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.5e-24 117.5 65 84.6
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 7.8e-24 116.3 65 83.1
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.6e-21 108.6 65 80.0
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 3.6e-21 107.5 67 70.1
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 1.2e-19 102.4 47 95.7
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.2e-16 92.4 48 87.5
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 1.5e-14 85.5 168 35.1
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 3.6e-13 80.9 71 57.7
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 1.4e-12 79.0 72 58.3
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 3.1e-12 77.8 72 58.3
FvH4_7g28392 Fragaria vesca HOM05D003867 ORTHO05D196806 2.4e-09 68.2 61 57.4
SGA_v2.0_scaffold63G21764 Striga asiatica HOM05D042453 ORTHO05D402154 2.3e-07 61.6 42 71.4
Nitab4.5_0027010g0010 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.9e-06 58.5 61 65.6
Duzib052G0593 Durio zibethinus HOM05D000222 ORTHO05D001350 5.6e-06 57.0 40 65.0


User provided reference genes

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