Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 2.9e-174 615.1 317 100.0
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 2.4e-99 366.3 331 64.0
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 5.1e-62 242.3 288 50.0
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 5.7e-53 212.2 313 43.8
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 2.8e-44 183.3 300 39.0
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 2.7e-39 166.8 310 34.8
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 4.4e-37 159.5 315 34.0
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 3.7e-36 156.4 302 36.8
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 1.1e-35 154.8 297 34.7
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 1.1e-35 154.8 310 36.1
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 2.4e-35 153.7 301 36.2
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 3.1e-35 153.3 308 34.4
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 9.1e-35 151.8 302 34.8
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 1.2e-34 151.4 328 35.4
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 1.6e-34 151.0 295 34.9
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 2.0e-34 150.6 296 34.8
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 2.0e-34 150.6 293 34.8
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 4.5e-34 149.4 317 34.7
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 1.7e-33 147.5 309 35.0
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 5.0e-33 146.0 307 33.6
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 6.5e-33 145.6 305 33.1
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 1.5e-32 144.4 307 32.9
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 2.5e-32 143.7 308 34.1
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 3.2e-32 143.3 305 36.7
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 5.5e-32 142.5 311 33.1
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 7.2e-32 142.1 308 34.7
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 9.4e-32 141.7 306 33.0
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 9.4e-32 141.7 313 31.6
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 1.2e-31 141.4 305 34.8
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 1.6e-31 141.0 291 36.1
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 1.6e-31 141.0 318 31.8
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 2.1e-31 140.6 302 34.1
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 4.7e-31 139.4 336 33.3
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 1.0e-30 138.3 299 34.4
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 3.0e-30 136.7 329 31.6
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 5.2e-30 136.0 333 30.0
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 1.2e-29 134.8 290 31.4
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 1.5e-29 134.4 307 31.9
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 1.3e-28 131.3 326 31.9
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 1.3e-28 131.3 354 30.5
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 1.7e-28 131.0 268 35.4
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 1.7e-28 131.0 301 30.9
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 4.8e-28 129.4 310 32.3
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 6.3e-28 129.0 327 30.6
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 1.4e-27 127.9 198 39.9
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 2.4e-27 127.1 325 31.1
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 2.4e-27 127.1 287 35.2
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 3.1e-27 126.7 293 33.8
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 4.1e-27 126.3 305 33.4
SalBow8G1297 Salvia bowleyana HOM05D006585 ORTHO05D007798 1.6e-26 124.4 139 48.9
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 2.0e-26 124.0 287 33.4
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 2.7e-26 123.6 342 31.9
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 7.7e-26 122.1 370 30.0
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 2.9e-25 120.2 337 30.3
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 6.5e-25 119.0 265 30.6
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 1.9e-24 117.5 352 28.4
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 5.5e-24 115.9 348 29.3
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 1.2e-23 114.8 277 28.9
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 3.6e-23 113.2 338 27.8
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 6.1e-23 112.5 281 29.9
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 6.1e-23 112.5 287 31.4
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 6.1e-23 112.5 287 31.4
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 6.8e-22 109.0 344 26.7
Ciclev10033875m.g Citrus clementina HOM05D006585 ORTHO05D007798 1.5e-21 107.8 294 31.3
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 4.4e-21 106.3 348 27.9
SalBow8G2270 Salvia bowleyana HOM05D006585 ORTHO05D007798 5.7e-21 105.9 197 41.1
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 9.8e-21 105.1 306 31.0
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 3.7e-20 103.2 312 27.6
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 3.7e-20 103.2 359 27.3
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 3.7e-20 103.2 317 30.9
Lalb_Chr16g0392221 Lupinus albus HOM05D006585 ORTHO05D007798 4.9e-20 102.8 219 33.3
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 6.3e-20 102.4 350 27.1
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 1.1e-19 101.7 379 24.8
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 1.1e-19 101.7 359 26.7
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.4e-19 101.3 161 39.1
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 1.4e-19 101.3 273 31.1
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 2.4e-19 100.5 349 24.9
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 2.4e-19 100.5 301 28.9
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 3.1e-19 100.1 271 30.6
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 1.2e-18 98.2 276 29.3
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 1.0e-17 95.1 301 26.2
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 1.7e-17 94.4 176 34.7
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 2.9e-17 93.6 283 30.0
SGA_v2.0_scaffold34G13586 Striga asiatica HOM05D006585 ORTHO05D007798 1.1e-16 91.7 106 49.1
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.5e-16 91.3 165 37.6
SGA_v2.0_scaffold779G53588 Striga asiatica HOM05D006585 ORTHO05D007798 4.3e-16 89.7 106 48.1
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 2.1e-15 87.4 332 27.4
ATR1154G038 Amborella trichopoda HOM05D006585 ORTHO05D007798 4.7e-15 86.3 304 28.9
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 8.0e-15 85.5 152 35.5
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 1.4e-14 84.7 151 35.1
Haze_12236 Corylus avellana HOM05D006585 ORTHO05D007798 2.3e-14 84.0 178 36.0
ATR1154G026 Amborella trichopoda HOM05D006585 ORTHO05D007798 4.0e-14 83.2 157 34.4
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 6.8e-14 82.4 279 30.1
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 1.2e-13 81.6 119 37.0
Glyma.08G283200 Glycine max HOM05D006585 ORTHO05D007798 2.9e-12 77.0 102 41.2
CSS0026295 Camellia sinensis var. sinensis HOM05D006585 ORTHO05D007798 1.8e-11 74.3 117 39.3
Thecc.03G022200 Theobroma cacao HOM05D006585 ORTHO05D007798 1.8e-11 74.3 115 39.1
Oeu056719.1 Olea europaea HOM05D006585 ORTHO05D007798 3.2e-11 73.6 164 34.8
HPP92_008331 Vanilla planifolia HOM05D006585 ORTHO05D007798 1.2e-10 71.6 150 35.3
Cc04_g11830 Coffea canephora HOM05D006585 ORTHO05D007798 2.3e-09 67.4 122 36.1
TPR.G34666 Trifolium pratense HOM05D006585 ORTHO05D007798 5.0e-09 66.2 170 30.0
PSO832G3049 Papaver somniferum HOM05D000629 ORTHO05D007798 6.6e-09 65.9 158 32.3
Rhsim12G0041300 Rhododendron simsii HOM05D006585 ORTHO05D007798 6.6e-09 65.9 286 26.2
EL10Ac5g10683 Beta vulgaris HOM05D006585 ORTHO05D007798 8.6e-09 65.5 115 32.2
PSO063G7660 Papaver somniferum HOM05D000629 ORTHO05D007798 1.5e-08 64.7 181 30.4
Actinidia08143 Actinidia chinensis HOM05D006585 ORTHO05D007798 4.3e-08 63.2 332 25.0
PGR119G1584 Punica granatum HOM05D006585 ORTHO05D007798 1.2e-07 61.6 176 30.1
SEGI_25539 Sequoiadendron giganteum HOM05D006585 ORTHO05D007798 6.2e-07 59.3 280 24.3
PSO832G2940 Papaver somniferum HOM05D006585 ORTHO05D007798 8.0e-07 58.9 120 32.5
SHI17754 Sapria himalayana HOM05D006585 ORTHO05D007798 6.8e-06 55.8 40 55.0


User provided reference genes

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