Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 1.2e-147 526.6 283 100.0
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 4.1e-103 378.6 280 75.0
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 1.7e-101 373.2 281 74.0
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 3.8e-101 372.1 282 72.0
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 9.5e-92 340.9 234 76.1
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 6.8e-90 334.7 288 66.3
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 4.4e-89 332.0 292 63.7
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 5.7e-89 331.6 299 62.9
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 9.8e-89 330.9 283 65.7
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 3.7e-88 328.9 308 64.9
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 8.3e-88 327.8 302 63.6
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 8.3e-88 327.8 302 63.6
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.1e-87 327.4 284 67.6
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 1.1e-87 327.4 307 61.9
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 2.4e-87 326.2 290 65.5
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 5.4e-87 325.1 297 66.7
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 7.0e-87 324.7 288 64.2
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 1.2e-86 323.9 306 62.1
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 1.6e-86 323.6 293 62.8
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 2.0e-86 323.2 288 61.5
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 3.5e-86 322.4 299 62.9
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 4.5e-86 322.0 294 63.9
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 1.7e-85 320.1 296 64.5
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 2.3e-85 319.7 300 61.7
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 2.3e-85 319.7 287 63.1
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 2.9e-85 319.3 299 64.5
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 3.8e-85 318.9 288 63.2
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 3.8e-85 318.9 287 65.2
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 5.0e-85 318.5 294 63.6
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 5.0e-85 318.5 293 64.5
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 6.6e-85 318.2 298 63.4
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 1.5e-84 317.0 304 62.2
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 1.9e-84 316.6 349 56.7
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 2.5e-84 316.2 312 60.9
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 7.3e-84 314.7 285 64.6
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 1.2e-83 313.9 286 65.0
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 1.2e-83 313.9 290 63.8
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 1.6e-83 313.5 296 63.9
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 2.1e-83 313.2 290 64.1
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 2.1e-83 313.2 290 63.8
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 2.8e-83 312.8 286 61.9
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 3.6e-83 312.4 290 64.1
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 1.0e-82 310.8 282 62.4
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 1.0e-82 310.8 301 59.5
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.8e-82 310.1 303 59.4
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 2.3e-82 309.7 222 73.4
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 4.0e-82 308.9 326 56.7
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 4.0e-82 308.9 291 60.5
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 5.2e-82 308.5 292 63.4
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 6.8e-82 308.1 287 62.0
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 1.5e-81 307.0 285 64.2
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 2.0e-81 306.6 295 61.4
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 2.6e-81 306.2 208 76.9
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 5.8e-81 305.1 291 62.5
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 1.7e-80 303.5 294 61.2
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 1.7e-80 303.5 299 61.9
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 6.4e-80 301.6 202 77.2
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 1.1e-79 300.8 287 60.6
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 3.2e-79 299.3 202 76.7
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 7.0e-79 298.1 289 60.2
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 1.6e-78 297.0 283 61.8
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 2.7e-78 296.2 209 72.7
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 4.6e-78 295.4 296 56.4
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 7.8e-78 294.7 294 57.5
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 1.7e-77 293.5 282 59.2
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 2.3e-77 293.1 208 74.5
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 2.3e-77 293.1 206 74.8
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 8.6e-77 291.2 206 74.3
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 1.5e-76 290.4 281 58.0
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 1.5e-76 290.4 374 51.9
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 1.9e-76 290.0 202 74.8
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 7.3e-76 288.1 298 57.0
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 9.5e-76 287.7 202 73.3
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.2e-75 287.3 233 70.8
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.2e-75 287.3 209 71.8
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 3.1e-74 282.7 291 57.7
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 5.2e-74 282.0 420 45.7
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 6.8e-74 281.6 285 57.9
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 8.9e-74 281.2 226 65.5
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 3.4e-73 279.3 202 70.8
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 9.8e-73 277.7 288 60.8
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 4.9e-72 275.4 199 71.4
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 1.9e-71 273.5 204 71.6
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 5.4e-71 271.9 219 65.8
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 9.2e-71 271.2 337 49.9
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 6.6e-69 265.0 232 62.5
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 8.6e-69 264.6 308 53.2
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 4.7e-67 258.8 281 56.6
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 8.9e-66 254.6 198 66.2
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 5.8e-65 251.9 199 64.3
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 1.1e-63 247.7 220 59.5
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 2.4e-63 246.5 289 53.6
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 3.2e-63 246.1 258 57.0
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 4.1e-63 245.7 252 55.2
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 6.6e-61 238.4 156 77.6
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 1.9e-60 236.9 250 60.8
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 6.2e-59 231.9 242 55.4
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 1.6e-51 207.2 287 48.1
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 2.2e-48 196.8 168 67.9
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.1e-47 194.5 138 76.8
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 1.4e-47 194.1 208 52.9
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 5.6e-44 182.2 138 71.7
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 9.6e-44 181.4 224 47.8
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 2.4e-42 176.8 209 56.0
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 5.1e-37 159.1 188 58.0
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 3.3e-36 156.4 116 69.8
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 4.0e-34 149.4 138 60.1
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 5.8e-33 145.6 402 34.8
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 4.0e-26 122.9 294 34.7
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.7e-24 117.5 81 71.6
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 2.9e-24 116.7 75 73.3
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 3.3e-20 103.2 227 37.0
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.6e-19 100.9 95 60.0
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 1.0e-13 81.6 65 64.6
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 1.2e-09 68.2 233 28.3
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.0e-08 65.1 44 68.2
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 2.5e-07 60.5 63 54.0
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 9.4e-07 58.5 38 73.7
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 2.7e-06 57.0 37 70.3


User provided reference genes

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