Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 2.3e-59 231.9 106 100.0
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 7.7e-55 216.9 106 96.2
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 2.1e-52 208.8 108 91.7
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 4.2e-45 184.5 101 81.2
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 3.6e-44 181.4 101 79.2
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 4.7e-44 181.0 101 80.2
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 2.3e-43 178.7 101 77.2
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 4.0e-43 177.9 93 82.8
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 5.2e-43 177.6 93 82.8
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 6.8e-43 177.2 98 77.6
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 8.8e-43 176.8 95 81.1
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 8.8e-43 176.8 93 81.7
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.2e-42 176.4 97 79.4
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.2e-42 176.4 97 79.4
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.5e-42 176.0 93 80.6
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.5e-42 176.0 93 80.6
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 2.0e-42 175.6 95 81.1
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 2.0e-42 175.6 93 80.6
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 2.6e-42 175.3 95 80.0
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 3.4e-42 174.9 93 80.6
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 3.4e-42 174.9 94 80.9
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 3.4e-42 174.9 102 74.5
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 7.5e-42 173.7 92 82.6
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 7.5e-42 173.7 92 82.6
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 7.5e-42 173.7 92 82.6
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 2.2e-41 172.2 97 77.3
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 2.8e-41 171.8 93 77.4
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 2.8e-41 171.8 102 75.5
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 2.8e-41 171.8 102 75.5
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 3.7e-41 171.4 103 75.7
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 4.9e-41 171.0 93 79.6
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 4.9e-41 171.0 93 79.6
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 6.3e-41 170.6 98 75.5
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 8.3e-41 170.2 99 73.7
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 8.3e-41 170.2 99 73.7
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 1.1e-40 169.9 92 78.3
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 1.4e-40 169.5 103 70.9
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 1.4e-40 169.5 91 82.4
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.4e-40 169.5 97 76.3
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.8e-40 169.1 91 80.2
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.8e-40 169.1 91 80.2
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 1.8e-40 169.1 95 74.7
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 1.8e-40 169.1 92 80.4
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 2.4e-40 168.7 92 80.4
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 2.4e-40 168.7 92 79.3
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 2.4e-40 168.7 92 79.3
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 2.4e-40 168.7 91 80.2
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 2.4e-40 168.7 95 74.7
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 3.1e-40 168.3 94 78.7
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 3.1e-40 168.3 95 74.7
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 4.1e-40 167.9 121 65.3
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 4.1e-40 167.9 99 72.7
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 7.0e-40 167.2 102 74.5
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 7.0e-40 167.2 102 74.5
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 1.2e-39 166.4 99 70.7
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.6e-39 166.0 99 70.7
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 1.6e-39 166.0 93 77.4
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 1.6e-39 166.0 94 75.5
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 1.6e-39 166.0 92 78.3
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 2.0e-39 165.6 94 77.7
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 2.7e-39 165.2 91 80.2
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 2.7e-39 165.2 93 77.4
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 3.5e-39 164.9 94 76.6
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 4.5e-39 164.5 92 77.2
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 4.5e-39 164.5 93 77.4
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 4.5e-39 164.5 93 74.2
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 4.5e-39 164.5 91 78.0
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 5.9e-39 164.1 91 78.0
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 7.8e-39 163.7 91 76.9
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 1.0e-38 163.3 89 82.0
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 1.0e-38 163.3 93 76.3
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 1.0e-38 163.3 94 74.5
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 1.3e-38 162.9 95 72.6
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 1.7e-38 162.5 94 75.5
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 1.7e-38 162.5 93 76.3
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 2.3e-38 162.2 91 76.9
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 2.3e-38 162.2 91 76.9
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 2.3e-38 162.2 94 76.6
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 6.6e-38 160.6 89 80.9
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 6.6e-38 160.6 99 69.7
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.1e-37 159.8 90 75.6
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.1e-37 159.8 90 75.6
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.9e-37 159.1 95 72.6
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 1.9e-37 159.1 91 76.9
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 4.3e-37 157.9 95 71.6
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 1.2e-36 156.4 92 71.7
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 1.2e-36 156.4 92 73.9
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.2e-36 156.4 91 76.9
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 1.6e-36 156.0 91 71.4
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 1.6e-36 156.0 89 76.4
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 2.1e-36 155.6 117 63.2
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 2.8e-36 155.2 92 71.7
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 2.8e-36 155.2 103 68.9
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 3.6e-36 154.8 92 72.8
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 4.7e-36 154.5 92 75.0
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 6.1e-36 154.1 79 82.3
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 2.3e-35 152.1 92 70.7
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 2.3e-35 152.1 92 70.7
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 3.0e-35 151.8 89 74.2
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 3.0e-35 151.8 92 75.0
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 3.0e-35 151.8 93 72.0
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 5.2e-35 151.0 90 70.0
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 5.2e-35 151.0 89 71.9
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 5.2e-35 151.0 89 71.9
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 1.5e-34 149.4 106 60.4
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 7.5e-34 147.1 91 68.1
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 9.8e-34 146.7 78 84.6
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 2.9e-33 145.2 91 70.3
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 2.9e-33 145.2 91 70.3
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 3.7e-33 144.8 91 70.3
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 4.9e-33 144.4 87 71.3
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 4.9e-33 144.4 89 70.8
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 4.9e-33 144.4 89 70.8
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 4.9e-33 144.4 89 70.8
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 1.1e-32 143.3 89 69.7
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 1.1e-32 143.3 89 69.7
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 1.1e-32 143.3 89 69.7
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 1.1e-32 143.3 89 69.7
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 1.1e-32 143.3 89 69.7
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.8e-32 142.5 89 70.8
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 9.2e-32 140.2 95 66.3
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 9.2e-32 140.2 104 62.5
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.2e-31 139.8 89 69.7
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 1.5e-29 132.9 69 81.2
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.8e-28 128.6 80 75.0
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 8.0e-28 127.1 78 73.1
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 2.6e-26 122.1 89 59.6
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 3.4e-26 121.7 74 70.3
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 5.8e-26 120.9 64 82.8
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 5.8e-26 120.9 61 95.1
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 8.3e-25 117.1 211 33.6
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 4.3e-21 104.8 68 67.6
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 4.7e-20 101.3 61 73.8
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.2e-18 96.7 61 70.5
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 2.1e-15 85.9 78 50.0
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 2.7e-15 85.5 68 48.5
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 1.5e-10 69.7 61 55.7
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 1.4e-08 63.2 36 63.9
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 1.2e-07 60.1 57 45.6


User provided reference genes

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