Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 3.6e-312 1074.7 520 100.0
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 1.1e-276 956.1 520 87.3
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 1.8e-274 948.7 517 87.4
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 6.1e-270 933.7 516 85.9
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 1.5e-268 929.1 520 84.0
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 1.3e-267 926.0 530 83.0
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 1.2e-265 919.5 519 83.4
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 1.2e-265 919.5 520 83.3
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 3.4e-265 917.9 520 82.9
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 1.0e-264 916.4 520 83.1
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 3.8e-264 914.4 521 82.9
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.4e-261 906.0 520 82.3
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 1.8e-261 905.6 520 81.5
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 9.7e-260 899.8 520 81.7
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.3e-259 899.4 554 78.5
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 1.3e-259 899.4 520 81.7
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 1.7e-259 899.0 520 81.3
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 3.7e-259 897.9 520 80.6
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 8.2e-259 896.7 520 82.7
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 1.4e-258 896.0 520 80.6
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 1.8e-258 895.6 520 81.7
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 4.1e-258 894.4 520 81.3
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 7.0e-258 893.6 520 80.6
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 9.1e-258 893.3 520 81.7
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 7.7e-257 890.2 518 81.1
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 6.5e-256 887.1 516 81.0
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 1.4e-255 885.9 520 79.4
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.4e-255 885.9 522 80.3
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 1.4e-255 885.9 515 82.5
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 2.5e-255 885.2 520 80.4
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 4.2e-255 884.4 516 80.4
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 5.5e-255 884.0 518 81.5
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 9.4e-255 883.2 519 80.5
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 1.2e-254 882.9 521 80.8
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 1.6e-254 882.5 520 80.0
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 1.6e-254 882.5 518 81.5
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.1e-254 882.1 522 80.1
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 2.1e-254 882.1 516 80.0
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 2.1e-254 882.1 516 80.0
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 4.7e-254 880.9 516 80.8
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.0e-253 879.8 522 79.9
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.4e-253 879.4 522 79.7
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 1.8e-253 879.0 518 79.3
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 2.3e-253 878.6 521 78.7
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 5.2e-253 877.5 518 79.5
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 8.8e-253 876.7 516 80.8
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 2.0e-252 875.5 520 80.0
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 2.0e-252 875.5 520 80.2
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 4.4e-252 874.4 519 79.6
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 4.4e-252 874.4 516 80.6
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 1.3e-251 872.8 544 76.7
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 1.7e-251 872.5 520 79.6
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 2.8e-251 871.7 516 79.1
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 3.7e-251 871.3 521 78.5
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 4.8e-251 870.9 520 79.2
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 6.3e-251 870.5 520 78.7
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 1.4e-250 869.4 516 79.1
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 1.8e-250 869.0 526 78.1
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 3.1e-250 868.2 521 78.7
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 1.2e-249 866.3 521 78.7
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 1.2e-249 866.3 541 76.0
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 2.0e-249 865.5 521 78.9
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 2.6e-249 865.1 520 76.7
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 1.3e-248 862.8 513 79.1
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 1.7e-248 862.4 510 80.0
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 2.9e-248 861.7 521 77.9
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 3.8e-248 861.3 516 79.5
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 9.4e-247 856.7 521 78.5
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 9.4e-247 856.7 520 76.9
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 2.7e-246 855.1 521 77.4
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 6.1e-246 854.0 520 78.5
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 6.1e-246 854.0 520 78.5
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 1.0e-245 853.2 521 77.4
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 1.2e-244 849.7 521 76.6
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 1.5e-244 849.4 521 76.6
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 1.5e-244 849.4 519 76.1
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 2.0e-244 849.0 515 77.7
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 2.0e-244 849.0 550 76.2
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 4.4e-244 847.8 513 78.0
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 9.7e-244 846.7 521 76.2
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 9.7e-244 846.7 521 76.0
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 9.7e-244 846.7 521 76.2
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 9.7e-244 846.7 521 76.2
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 1.3e-243 846.3 519 76.5
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 1.3e-243 846.3 520 77.3
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 2.2e-243 845.5 516 77.1
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 2.2e-243 845.5 516 77.1
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 2.2e-243 845.5 521 77.2
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 3.7e-243 844.7 466 85.8
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 4.8e-243 844.3 519 76.5
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 4.8e-243 844.3 521 75.6
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 1.1e-242 843.2 517 77.2
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.1e-242 843.2 530 76.8
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 1.1e-242 843.2 516 77.5
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 1.8e-242 842.4 519 76.3
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 3.1e-242 841.6 519 76.3
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 3.1e-242 841.6 519 76.3
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 3.1e-242 841.6 492 80.5
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 2.0e-241 839.0 520 76.7
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 5.9e-241 837.4 466 84.5
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 7.7e-241 837.0 518 77.6
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 2.2e-240 835.5 520 77.5
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 3.2e-239 831.6 520 76.3
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 9.4e-239 830.1 516 77.7
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.1e-238 828.9 514 76.8
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 2.7e-238 828.6 524 75.8
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 4.7e-238 827.8 518 75.5
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 6.1e-238 827.4 519 75.0
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 6.8e-237 823.9 518 75.5
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 1.5e-236 822.8 520 75.6
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 2.0e-236 822.4 464 83.0
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 1.2e-233 813.1 520 74.6
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 2.0e-233 812.4 467 81.8
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 7.7e-233 810.4 519 74.6
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 7.7e-233 810.4 520 75.8
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 1.7e-232 809.3 516 74.8
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 5.0e-232 807.7 513 74.3
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 6.6e-232 807.4 513 74.5
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 1.9e-231 805.8 467 80.5
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 1.9e-231 805.8 573 69.6
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 9.5e-231 803.5 553 71.1
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 1.0e-229 800.0 519 74.0
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 8.9e-229 797.0 473 78.9
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 3.4e-228 795.0 520 72.7
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 3.4e-228 795.0 521 72.2
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 2.2e-227 792.3 472 78.8
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 8.3e-227 790.4 520 72.5
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 1.1e-226 790.0 490 78.0
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 5.4e-226 787.7 519 74.4
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 5.4e-226 787.7 466 79.0
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 2.0e-225 785.8 520 75.2
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 1.0e-224 783.5 520 72.3
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 5.6e-223 777.7 520 71.3
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 2.8e-222 775.4 520 71.2
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 1.4e-218 763.1 561 68.8
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 3.2e-218 761.9 518 71.0
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 1.1e-213 746.9 540 67.6
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 2.9e-211 738.8 520 70.0
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 7.3e-207 724.2 519 69.6
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 2.8e-206 722.2 520 66.5
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 8.1e-206 720.7 502 72.7
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 2.1e-193 679.5 380 83.9
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 1.6e-190 669.8 480 68.3
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 1.8e-189 666.4 376 82.2
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 9.0e-189 664.1 382 81.7
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 3.0e-184 649.0 480 67.5
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 4.0e-181 638.6 555 59.3
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 1.4e-173 613.6 486 61.5
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 4.6e-169 598.6 446 62.3
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 4.1e-165 585.5 472 60.0
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 7.2e-154 548.1 472 56.6
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 4.2e-146 522.3 352 72.2
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 1.8e-136 490.3 289 81.3
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 8.2e-134 481.5 288 81.6
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 5.3e-133 478.8 265 82.3
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 2.6e-132 476.5 293 77.5
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 6.8e-128 461.8 291 74.6
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 2.0e-127 460.3 286 75.9
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 2.3e-107 393.7 250 74.0
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 8.3e-102 375.2 244 74.2
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.6e-81 306.6 204 71.6
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 1.1e-56 225.3 410 35.1
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 1.6e-52 211.5 477 31.7
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 2.1e-52 211.1 131 74.8
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 9.3e-45 185.7 203 49.8
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 5.5e-37 159.8 148 52.0
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 5.7e-34 149.8 109 65.1
Os01g0906000 Oryza sativa ssp. japonica HOM05D003954 ORTHO05D004627 6.1e-28 129.8 86 74.4
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.5e-21 108.6 142 50.0
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 3.6e-20 104.0 59 74.6
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 1.4e-19 102.1 60 75.0
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 1.7e-17 95.1 144 37.5
Actinidia32651 Actinidia chinensis HOM05D003954 ORTHO05D004627 5.9e-15 86.7 165 39.4
CAN.G195.50 Capsicum annuum HOM05D003954 ORTHO05D004627 5.9e-07 60.1 47 59.6
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.0e-06 59.3 37 70.3


User provided reference genes

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