Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 2.0e-71 272.3 134 100.0
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 1.3e-35 153.3 127 65.4
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 7.3e-34 147.5 133 60.9
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 7.5e-31 137.5 133 58.6
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 6.0e-28 127.9 130 51.5
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 2.3e-27 125.9 127 57.5
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 7.3e-26 120.9 137 50.4
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 1.6e-25 119.8 142 49.3
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 8.1e-25 117.5 148 48.0
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 8.1e-25 117.5 136 47.1
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 2.3e-24 115.9 128 50.8
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 1.5e-23 113.2 136 45.6
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 2.0e-23 112.8 138 47.8
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 2.0e-23 112.8 131 51.1
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 2.0e-23 112.8 127 49.6
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 2.6e-23 112.5 137 46.7
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 2.6e-23 112.5 127 49.6
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 7.5e-23 110.9 127 48.8
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 2.2e-22 109.4 142 46.5
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 3.7e-22 108.6 125 48.0
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 3.7e-22 108.6 127 48.8
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 4.9e-22 108.2 133 46.6
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 6.4e-22 107.8 133 45.9
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 8.3e-22 107.5 138 47.1
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 1.9e-21 106.3 136 45.6
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 5.4e-21 104.8 135 43.7
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 7.1e-21 104.4 133 44.4
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 7.1e-21 104.4 138 46.4
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 9.2e-21 104.0 144 44.4
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 1.6e-20 103.2 133 42.9
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 2.1e-20 102.8 127 48.8
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 3.5e-20 102.1 123 50.4
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 6.0e-20 101.3 136 44.9
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 1.7e-19 99.8 128 45.3
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 2.3e-19 99.4 140 45.7
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 3.0e-19 99.0 132 43.2
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 3.9e-19 98.6 91 59.3
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 6.6e-19 97.8 139 43.9
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 1.1e-18 97.1 138 44.2
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 3.3e-18 95.5 137 44.5
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.3e-18 95.1 139 41.7
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 4.3e-18 95.1 137 41.6
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 9.5e-18 94.0 143 42.7
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 9.5e-18 94.0 135 43.7
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.2e-17 93.6 140 41.4
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 1.2e-17 93.6 127 41.7
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 3.6e-17 92.0 132 41.7
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 3.6e-17 92.0 125 44.8
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 4.7e-17 91.7 139 43.9
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.7e-17 91.7 144 41.0
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 6.2e-17 91.3 141 43.3
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 8.1e-17 90.9 147 40.1
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 1.1e-16 90.5 129 41.9
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 1.1e-16 90.5 141 44.0
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.1e-16 90.5 147 40.1
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 1.8e-16 89.7 125 43.2
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 2.3e-16 89.4 126 44.4
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 4.0e-16 88.6 129 41.9
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 2.6e-15 85.9 135 42.2
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 4.4e-15 85.1 130 41.5
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 4.4e-15 85.1 128 40.6
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 7.6e-15 84.3 137 40.9
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 2.2e-14 82.8 112 45.5
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 2.9e-14 82.4 82 61.0
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 2.9e-14 82.4 100 47.0
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 3.7e-14 82.0 132 42.4
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 1.9e-13 79.7 131 39.7
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 9.2e-13 77.4 113 44.2
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 1.2e-12 77.0 94 47.9
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.6e-12 76.6 88 50.0
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 1.0e-11 73.9 99 46.5
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 3.0e-11 72.4 91 44.0
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 8.6e-11 70.9 106 42.5
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 2.5e-10 69.3 95 42.1
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 9.6e-10 67.4 138 37.0
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 3.6e-09 65.5 125 40.8
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 1.8e-08 63.2 113 38.1
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 2.4e-08 62.8 92 43.5
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 2.0e-07 59.7 92 42.4


User provided reference genes

Program Settings