Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21518 Striga asiatica HOM05D004158 ORTHO05D004884 5.4e-111 404.4 219 100.0
MSTRG.406 Avicennia marina HOM05D004158 ORTHO05D004884 1.5e-76 290.0 169 78.7
MSTRG.9120 Avicennia marina HOM05D004158 ORTHO05D004884 5.3e-74 281.6 172 77.3
SalBow6G6612 Salvia bowleyana HOM05D004158 ORTHO05D004884 6.9e-74 281.2 169 78.1
Migut.F00926 Erythranthe guttata HOM05D004158 ORTHO05D004884 7.6e-73 277.7 210 65.2
Migut.F01667 Erythranthe guttata HOM05D004158 ORTHO05D004884 9.9e-73 277.3 164 78.0
Cc02_g10420 Coffea canephora HOM05D004158 ORTHO05D004884 2.2e-72 276.2 169 75.7
SalBow4G0446 Salvia bowleyana HOM05D004158 ORTHO05D004884 2.4e-71 272.7 164 75.6
Dinv20856 Davidia involucrata HOM05D004158 ORTHO05D004884 1.3e-69 266.9 163 73.6
Oeu059840.1 Olea europaea HOM05D004158 ORTHO05D004884 1.3e-69 266.9 241 60.2
CSS0041510 Camellia sinensis var. sinensis HOM05D004158 ORTHO05D004884 1.9e-68 263.1 165 73.3
Nitab4.5_0000096g0160 Nicotiana tabacum HOM05D004158 ORTHO05D004884 5.6e-68 261.5 163 72.4
PGSC0003DMG400023377 Solanum tuberosum HOM05D004158 ORTHO05D004884 2.1e-67 259.6 167 71.9
CAN.G135.48 Capsicum annuum HOM05D004158 ORTHO05D004884 3.7e-67 258.8 169 70.4
Nitab4.5_0007922g0020 Nicotiana tabacum HOM05D004158 ORTHO05D004884 1.4e-66 256.9 163 71.2
vmacro07210 Vaccinium macrocarpon HOM05D004158 ORTHO05D004884 1.4e-66 256.9 173 70.5
Peaxi162Scf00398g00720 Petunia axillaris HOM05D004158 ORTHO05D004884 1.8e-66 256.5 168 70.2
Solyc05g055420.4 Solanum lycopersicum HOM05D004158 ORTHO05D004884 1.8e-66 256.5 167 71.9
Sopen05g033860 Solanum pennellii HOM05D004158 ORTHO05D004884 6.9e-66 254.6 167 70.7
Actinidia18561 Actinidia chinensis HOM05D004158 ORTHO05D004884 1.2e-65 253.8 163 71.2
Rhsim03G0110500 Rhododendron simsii HOM05D004158 ORTHO05D004884 2.0e-65 253.1 162 71.6
Sopen11g003630 Solanum pennellii HOM05D004158 ORTHO05D004884 2.0e-65 253.1 164 70.7
Solyc11g007770.2 Solanum lycopersicum HOM05D004158 ORTHO05D004884 2.6e-65 252.7 164 70.1
PGSC0003DMG400027356 Solanum tuberosum HOM05D004158 ORTHO05D004884 4.5e-65 251.9 164 70.7
Nitab4.5_0003408g0110 Nicotiana tabacum HOM05D004158 ORTHO05D004884 1.0e-64 250.8 163 69.9
Prupe.2G096900 Prunus persica HOM05D004158 ORTHO05D004884 1.3e-64 250.4 169 67.5
CiPaw.13G034700 Carya illinoinensis HOM05D004158 ORTHO05D004884 4.9e-64 248.4 169 68.6
CiPaw.14G027300 Carya illinoinensis HOM05D004158 ORTHO05D004884 4.9e-64 248.4 216 57.4
Lj3A934G31 Lonicera japonica HOM05D004158 ORTHO05D004884 6.5e-64 248.1 167 71.9
PSO063G5270 Papaver somniferum HOM05D004158 ORTHO05D004884 6.5e-64 248.1 163 66.3
PSO339G4003 Papaver somniferum HOM05D004158 ORTHO05D004884 6.5e-64 248.1 163 66.3
TAR623G1307 Trochodendron aralioides HOM05D004158 ORTHO05D004884 1.1e-63 247.3 163 69.3
FAN01G2366 Fragaria x ananassa HOM05D004158 ORTHO05D004884 2.5e-63 246.1 165 69.1
FAN10G3528 Fragaria x ananassa HOM05D004158 ORTHO05D004884 2.5e-63 246.1 165 69.1
TWI38G1342 Tripterygium wilfordii HOM05D004158 ORTHO05D004884 2.5e-63 246.1 169 68.6
Nn2g13950 Nelumbo nucifera HOM05D004158 ORTHO05D004884 3.2e-63 245.7 166 66.3
Cfa011201 Carpinus fangiana HOM05D004158 ORTHO05D004884 4.2e-63 245.4 165 69.7
Potri.010G232700 Populus trichocarpa HOM05D004158 ORTHO05D004884 7.1e-63 244.6 168 68.5
MD07G1076200 Malus domestica HOM05D004158 ORTHO05D004884 9.3e-63 244.2 167 66.5
RcHm_v2.0_Chr1g0336981 Rosa chinensis HOM05D004158 ORTHO05D004884 9.3e-63 244.2 170 64.7
Sc09g0005790 Simmondsia chinensis HOM05D004158 ORTHO05D004884 1.2e-62 243.8 174 65.5
Potri.008G028900 Populus trichocarpa HOM05D004158 ORTHO05D004884 1.6e-62 243.4 168 68.5
FvH4_7g07030 Fragaria vesca HOM05D004158 ORTHO05D004884 2.1e-62 243.0 165 68.5
Cpa.g.sc128.66 Carica papaya HOM05D004158 ORTHO05D004884 2.7e-62 242.7 161 66.5
ClCG05G021490 Citrullus lanatus HOM05D004158 ORTHO05D004884 3.5e-62 242.3 165 66.1
FAN06G0479 Fragaria x ananassa HOM05D004158 ORTHO05D004884 3.5e-62 242.3 165 68.5
Nitab4.5_0000593g0240 Nicotiana tabacum HOM05D004158 ORTHO05D004884 3.5e-62 242.3 163 68.7
Peaxi162Scf00004g00010 Petunia axillaris HOM05D004158 ORTHO05D004884 6.0e-62 241.5 160 67.5
PGR142G1291 Punica granatum HOM05D004158 ORTHO05D004884 7.9e-62 241.1 167 68.3
SGA_v2.0_scaffold13G06506 Striga asiatica HOM05D004158 ORTHO05D004884 7.9e-62 241.1 158 69.6
ECA232G3252 Erigeron canadensis HOM05D004158 ORTHO05D004884 1.0e-61 240.7 162 67.9
Hma1.2p1_0492F.1_g164760 Hydrangea macrophylla HOM05D004158 ORTHO05D004884 1.3e-61 240.4 163 68.1
Thecc.10G093600 Theobroma cacao HOM05D004158 ORTHO05D004884 2.3e-61 239.6 166 65.7
DCAR_019047 Daucus carota HOM05D004158 ORTHO05D004884 3.0e-61 239.2 162 68.5
MD02G1240900 Malus domestica HOM05D004158 ORTHO05D004884 3.9e-61 238.8 167 65.3
Sed0009937 Sechium edule HOM05D004158 ORTHO05D004884 6.7e-61 238.0 165 64.2
GSVIVG01034672001 Vitis vinifera HOM05D004158 ORTHO05D004884 6.7e-61 238.0 163 66.9
Ah.04g163550 Amaranthus hybridus HOM05D004158 ORTHO05D004884 8.7e-61 237.7 171 64.9
arahy.Tifrunner.gnm1.ann1.SHL6Z6 Arachis hypogaea HOM05D004158 ORTHO05D004884 1.5e-60 236.9 162 66.7
CsaV3_5G035760 Cucumis sativus L. HOM05D004158 ORTHO05D004884 1.5e-60 236.9 165 63.6
Gohir.D05G291601 Gossypium hirsutum HOM05D004158 ORTHO05D004884 1.9e-60 236.5 166 65.7
CDE05G0220 Ceratophyllum demersum HOM05D004158 ORTHO05D004884 2.5e-60 236.1 166 62.0
COL.COLO4_07610 Corchorus olitorius HOM05D004158 ORTHO05D004884 2.5e-60 236.1 167 64.7
Duzib114G0557 Durio zibethinus HOM05D004158 ORTHO05D004884 3.3e-60 235.7 166 66.3
TPR.G21919 Trifolium pratense HOM05D004158 ORTHO05D004884 3.3e-60 235.7 162 66.0
arahy.Tifrunner.gnm1.ann1.16QXFL Arachis hypogaea HOM05D004158 ORTHO05D004884 4.3e-60 235.3 162 66.0
Gorai.009G307300 Gossypium raimondii HOM05D004158 ORTHO05D004884 4.3e-60 235.3 166 65.1
Manes.06G020900 Manihot esculenta HOM05D004158 ORTHO05D004884 4.3e-60 235.3 170 65.3
Sabra10G0180500 Salix brachista HOM05D004158 ORTHO05D004884 4.3e-60 235.3 165 67.3
Ca_10468_v3 Cicer arietinum L. HOM05D004158 ORTHO05D004884 5.7e-60 235.0 162 66.0
Hund06745 Selenicereus undatus HOM05D004158 ORTHO05D004884 5.7e-60 235.0 167 65.3
Eucgr.G02723 Eucalyptus grandis HOM05D004158 ORTHO05D004884 7.4e-60 234.6 160 70.6
QL04p040389 Quercus lobata HOM05D004158 ORTHO05D004884 7.4e-60 234.6 167 64.7
Gohir.A05G290400 Gossypium hirsutum HOM05D004158 ORTHO05D004884 9.6e-60 234.2 166 65.1
Lj5g0005466 Lotus japonicus HOM05D004158 ORTHO05D004884 9.6e-60 234.2 160 66.9
VMungo0720G2210 Vigna mungo HOM05D004158 ORTHO05D004884 1.6e-59 233.4 162 66.0
Hund06746 Selenicereus undatus HOM05D004158 ORTHO05D004884 2.1e-59 233.0 170 64.7
Lalb_Chr06g0170091 Lupinus albus HOM05D004158 ORTHO05D004884 3.7e-59 232.3 160 64.4
Atru.chr12.930 Acer truncatum HOM05D004158 ORTHO05D004884 4.8e-59 231.9 166 64.5
Nn6g35104 Nelumbo nucifera HOM05D004158 ORTHO05D004884 4.8e-59 231.9 163 65.6
AUR62022268 Chenopodium quinoa HOM05D004158 ORTHO05D004884 6.3e-59 231.5 167 62.3
Glyma.10G200700 Glycine max HOM05D004158 ORTHO05D004884 8.2e-59 231.1 163 64.4
Lsat_1_v5_gn_9_70320 Lactuca sativa HOM05D004158 ORTHO05D004884 8.2e-59 231.1 164 64.0
Psat6g176040 Pisum sativum HOM05D004158 ORTHO05D004884 8.2e-59 231.1 159 66.0
Sabra08G0019400 Salix brachista HOM05D004158 ORTHO05D004884 1.1e-58 230.7 192 59.9
AUR62031975 Chenopodium quinoa HOM05D004158 ORTHO05D004884 1.4e-58 230.3 164 62.2
Glyma.20G189900 Glycine max HOM05D004158 ORTHO05D004884 1.4e-58 230.3 162 62.3
CAN.G1891.11 Capsicum annuum HOM05D004158 ORTHO05D004884 1.8e-58 229.9 163 62.6
Haze_02645 Corylus avellana HOM05D004158 ORTHO05D004884 1.8e-58 229.9 185 61.1
Lalb_Chr02g0151231 Lupinus albus HOM05D004158 ORTHO05D004884 1.8e-58 229.9 161 63.4
Lalb_Chr21g0313121 Lupinus albus HOM05D004158 ORTHO05D004884 1.8e-58 229.9 160 63.8
Medtr1g090920 Medicago truncatula HOM05D004158 ORTHO05D004884 1.8e-58 229.9 160 65.6
Ciclev10030719m.g Citrus clementina HOM05D004158 ORTHO05D004884 2.4e-58 229.6 159 65.4
Phvul.007G144400 Phaseolus vulgaris HOM05D004158 ORTHO05D004884 6.9e-58 228.0 162 65.4
unitig_748.g8777 Utricularia gibba HOM05D004158 ORTHO05D004884 6.9e-58 228.0 162 65.4
HanXRQChr09g0247121 Helianthus annuus HOM05D004158 ORTHO05D004884 9.0e-58 227.6 161 64.0
Aqoxy1G01001 Aquilegia oxysepala HOM05D004158 ORTHO05D004884 2.0e-57 226.5 163 66.3
PSO063G3822 Papaver somniferum HOM05D004158 ORTHO05D004884 2.0e-57 226.5 157 65.0
HanXRQChr08g0218041 Helianthus annuus HOM05D004158 ORTHO05D004884 2.6e-57 226.1 169 60.9
CDE05G1361 Ceratophyllum demersum HOM05D004158 ORTHO05D004884 5.9e-57 224.9 166 60.2
Sc25g0001340 Simmondsia chinensis HOM05D004158 ORTHO05D004884 1.3e-56 223.8 168 63.1
MELO3C012377.2 Cucumis melo HOM05D004158 ORTHO05D004884 1.7e-56 223.4 195 54.4
MD02G1240800 Malus domestica HOM05D004158 ORTHO05D004884 2.2e-56 223.0 183 59.0
Duzib128G0995 Durio zibethinus HOM05D004158 ORTHO05D004884 3.8e-56 222.2 124 77.4
AL6G14142 Arabidopsis lyrata HOM05D004158 ORTHO05D004884 5.0e-56 221.9 161 62.1
HanXRQChr13g0404601 Helianthus annuus HOM05D004158 ORTHO05D004884 5.0e-56 221.9 166 60.2
CARHR208770 Cardamine hirsuta HOM05D004158 ORTHO05D004884 2.5e-55 219.5 161 61.5
SHI21307 Sapria himalayana HOM05D004158 ORTHO05D004884 4.2e-55 218.8 163 62.0
Aa31LG9G6390 Aethionema arabicum HOM05D004158 ORTHO05D004884 7.2e-55 218.0 173 59.0
Aqoxy2G01507 Aquilegia oxysepala HOM05D004158 ORTHO05D004884 7.2e-55 218.0 163 58.9
A10p31590 Brassica napus HOM05D004158 ORTHO05D004884 9.3e-55 217.6 161 60.2
BraA10t45205Z Brassica rapa HOM05D004158 ORTHO05D004884 9.3e-55 217.6 161 60.2
C09p72260 Brassica napus HOM05D004158 ORTHO05D004884 1.2e-54 217.2 161 60.2
BcaB05g21757 Brassica carinata HOM05D004158 ORTHO05D004884 1.6e-54 216.9 161 60.2
Lsat_1_v5_gn_8_22880 Lactuca sativa HOM05D004158 ORTHO05D004884 1.6e-54 216.9 169 59.2
BcaC06g32159 Brassica carinata HOM05D004158 ORTHO05D004884 2.1e-54 216.5 161 61.5
ATR0665G113 Amborella trichopoda HOM05D004158 ORTHO05D004884 2.7e-54 216.1 165 56.4
BolC9t59970H Brassica oleracea HOM05D004158 ORTHO05D004884 3.6e-54 215.7 161 59.6
BraA02t04815Z Brassica rapa HOM05D004158 ORTHO05D004884 3.6e-54 215.7 161 61.5
Carub.0006s0343 Capsella rubella HOM05D004158 ORTHO05D004884 1.0e-53 214.2 161 61.5
AT5G04500 Arabidopsis thaliana HOM05D004158 ORTHO05D004884 1.3e-53 213.8 161 59.0
BcaC03g12948 Brassica carinata HOM05D004158 ORTHO05D004884 1.3e-53 213.8 161 60.2
C02p01960 Brassica napus HOM05D004158 ORTHO05D004884 1.3e-53 213.8 164 59.1
BolC2t06153H Brassica oleracea HOM05D004158 ORTHO05D004884 1.3e-53 213.8 161 60.2
THA.LOC104816449 Tarenaya hassleriana HOM05D004158 ORTHO05D004884 3.0e-53 212.6 168 56.0
Aa31LG11G5370 Aethionema arabicum HOM05D004158 ORTHO05D004884 8.7e-53 211.1 158 62.0
Sp1g23120 Schrenkiella parvula HOM05D004158 ORTHO05D004884 1.1e-52 210.7 161 59.6
PSO384G3917 Papaver somniferum HOM05D004158 ORTHO05D004884 2.5e-52 209.5 159 61.6
PSO339G6367 Papaver somniferum HOM05D004158 ORTHO05D004884 9.7e-52 207.6 159 61.0
MBI04_g34128_MAGBIO Magnolia biondii HOM05D004158 ORTHO05D004884 3.7e-51 205.7 171 57.3
HPP92_019597 Vanilla planifolia HOM05D004158 ORTHO05D004884 6.3e-51 204.9 168 57.7
Pp3c6_28590 Physcomitrium patens HOM05D004158 ORTHO05D004884 1.5e-49 200.3 167 57.5
Pp3c5_3040 Physcomitrium patens HOM05D004158 ORTHO05D004884 1.0e-48 197.6 166 54.2
Pp3c16_2210 Physcomitrium patens HOM05D004158 ORTHO05D004884 6.5e-48 194.9 168 57.1
ATR0749G020 Amborella trichopoda HOM05D004158 ORTHO05D004884 1.6e-46 190.3 150 59.3
SMO367G0291 Selaginella moellendorffii HOM05D004158 ORTHO05D004884 1.4e-45 187.2 130 63.1
Mapoly0001s0350 Marchantia polymorpha HOM05D004158 ORTHO05D004884 3.9e-45 185.7 167 53.9
AagrBONN_evm.TU.Sc2ySwM_368.1503 Anthoceros agrestis HOM05D004158 ORTHO05D004884 1.1e-44 184.1 171 53.8
EL10Ac4g08627 Beta vulgaris HOM05D004158 ORTHO05D004884 2.0e-44 183.3 164 54.3
Zm00001eb053370 Zea mays HOM05D004158 ORTHO05D004884 1.7e-43 180.3 124 62.9
Zm00001eb294280 Zea mays HOM05D004158 ORTHO05D004884 1.7e-43 180.3 122 64.8
Zm00001eb342340 Zea mays HOM05D004158 ORTHO05D004884 4.8e-43 178.7 123 63.4
Os03g0684500 Oryza sativa ssp. japonica HOM05D004158 ORTHO05D004884 8.2e-43 177.9 124 63.7
Os05g0540000 Oryza sativa ssp. japonica HOM05D004158 ORTHO05D004884 9.1e-42 174.5 163 51.5
ECA233G5256 Erigeron canadensis HOM05D004158 ORTHO05D004884 3.8e-40 169.1 107 68.2
MBI01_g11032_MAGBIO Magnolia biondii HOM05D004158 ORTHO05D004884 1.6e-38 163.7 96 76.0
Manes.10G053900 Manihot esculenta HOM05D004158 ORTHO05D004884 2.6e-33 146.4 115 60.0
unitig_746.g26628 Utricularia gibba HOM05D004158 ORTHO05D004884 5.9e-33 145.2 102 65.7
CAN.G765.11 Capsicum annuum HOM05D004158 ORTHO05D004884 1.4e-29 134.0 82 70.7
Thhalv10012710m.g Eutrema salsugineum HOM05D004158 ORTHO05D004884 1.3e-27 127.5 161 41.6
RcHm_v2.0_Chr1g0359101 Rosa chinensis HOM05D004158 ORTHO05D004884 1.7e-27 127.1 112 55.4
Oeu047512.1 Olea europaea HOM05D004158 ORTHO05D004884 4.4e-20 102.4 54 79.6
MSTRG.27512 Avicennia marina HOM05D004158 ORTHO05D004884 1.7e-19 100.5 54 75.9
MBI01_g11031_MAGBIO Magnolia biondii HOM05D004158 ORTHO05D004884 5.2e-13 79.0 70 54.3
Cre09.g388450 Chlamydomonas reinhardtii HOM05D004158 ORTHO05D004884 5.7e-12 75.5 153 32.7
Oeu032438.1 Olea europaea HOM05D004158 ORTHO05D004884 1.7e-11 73.9 40 77.5
FAN13G2508 Fragaria x ananassa HOM05D004158 ORTHO05D004884 5.6e-07 58.9 29 75.9


User provided reference genes

Program Settings