Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 3.2e-173 611.7 316 100.0
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 1.8e-115 419.9 320 71.9
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 2.5e-109 399.4 273 72.9
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 6.8e-107 391.3 257 75.5
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 8.9e-107 391.0 306 65.4
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 3.4e-106 389.0 310 66.5
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 3.4e-106 389.0 260 75.8
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 3.4e-106 389.0 251 76.5
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 1.3e-105 387.1 312 65.7
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 1.1e-104 384.0 280 70.7
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 1.9e-104 383.3 262 72.9
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 3.2e-104 382.5 256 73.8
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 3.2e-104 382.5 256 74.2
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 5.4e-104 381.7 256 73.4
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 1.6e-103 380.2 256 73.4
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 1.6e-103 380.2 275 69.1
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 3.5e-103 379.0 254 73.2
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 6.0e-103 378.3 256 74.6
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 3.9e-102 375.6 335 61.5
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 6.6e-102 374.8 260 74.2
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 8.6e-102 374.4 289 65.7
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 8.6e-102 374.4 227 79.3
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 1.1e-101 374.0 252 75.0
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 5.6e-101 371.7 257 71.2
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 5.6e-101 371.7 257 72.0
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 9.5e-101 370.9 256 72.7
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 9.5e-101 370.9 323 63.2
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 2.1e-100 369.8 256 69.9
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 1.1e-99 367.5 259 69.1
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 1.4e-99 367.1 254 70.1
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 2.3e-99 366.3 256 71.5
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 3.1e-99 365.9 250 71.6
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 5.2e-99 365.2 269 68.0
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 5.2e-99 365.2 311 62.4
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 5.2e-99 365.2 266 69.2
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 6.8e-99 364.8 235 75.7
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 6.8e-99 364.8 258 69.8
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 6.8e-99 364.8 266 69.5
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 1.2e-98 364.0 258 69.4
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 1.5e-98 363.6 295 62.4
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 2.6e-98 362.8 312 62.5
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 2.6e-98 362.8 254 70.1
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 7.6e-98 361.3 238 73.1
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 9.9e-98 360.9 306 61.8
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 1.3e-97 360.5 277 66.8
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 1.7e-97 360.1 280 65.7
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 1.7e-97 360.1 254 70.1
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 4.9e-97 358.6 284 63.7
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 8.3e-97 357.8 318 60.4
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 2.4e-96 356.3 259 68.7
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 5.4e-96 355.1 289 64.7
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 3.5e-95 352.4 257 68.5
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 4.6e-95 352.1 268 66.4
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 1.3e-94 350.5 306 60.8
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 3.9e-94 349.0 232 72.4
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 3.9e-94 349.0 284 65.1
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 5.1e-94 348.6 260 67.3
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 1.1e-93 347.4 259 67.6
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 1.5e-93 347.1 253 67.6
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 5.6e-93 345.1 248 70.6
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 5.6e-93 345.1 268 67.2
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 9.6e-93 344.4 239 71.1
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 1.2e-92 344.0 258 67.1
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 1.2e-92 344.0 238 71.0
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 2.1e-92 343.2 253 69.2
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 2.1e-92 343.2 285 62.5
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 2.1e-92 343.2 294 60.5
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 2.8e-92 342.8 239 69.9
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 3.6e-92 342.4 268 67.2
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.7e-92 342.0 258 66.7
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 8.1e-92 341.3 241 71.4
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 3.1e-91 339.3 252 69.0
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 4.0e-91 339.0 271 64.9
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 2.6e-90 336.3 246 65.9
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 2.6e-90 336.3 288 62.5
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 3.4e-90 335.9 252 68.3
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 3.4e-90 335.9 288 62.5
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 3.4e-90 335.9 288 62.5
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 1.3e-89 334.0 317 57.1
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 2.2e-89 333.2 290 61.7
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 8.4e-89 331.3 252 66.3
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 1.9e-88 330.1 268 64.6
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 7.1e-88 328.2 268 60.8
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 4.6e-87 325.5 224 71.4
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 7.8e-87 324.7 224 71.9
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 2.5e-85 319.7 288 60.8
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 2.1e-84 316.6 218 72.0
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 1.4e-83 313.9 220 69.5
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 5.3e-83 312.0 257 61.5
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 1.2e-82 310.8 242 65.7
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 4.4e-82 308.9 259 64.1
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 3.5e-79 299.3 227 66.1
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 7.8e-79 298.1 227 65.6
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 3.0e-78 296.2 255 60.8
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 3.0e-78 296.2 285 56.8
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 6.6e-78 295.0 227 65.6
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 2.5e-77 293.1 243 60.5
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 2.5e-77 293.1 244 61.1
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 3.4e-74 282.7 251 59.0
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 5.8e-74 282.0 229 64.6
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 6.7e-70 268.5 217 62.7
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 1.2e-66 257.7 231 60.2
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 2.0e-66 256.9 239 50.6
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 1.9e-64 250.4 240 52.1
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 3.2e-64 249.6 241 53.5
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 2.2e-57 226.9 241 51.9
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 3.0e-54 216.5 207 50.7
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 2.2e-52 210.3 148 71.6
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 9.0e-51 204.9 196 54.1
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 1.0e-46 191.4 215 47.4
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 4.2e-24 116.3 122 53.3
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 3.6e-23 113.2 221 33.9
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 1.2e-21 108.2 94 58.5
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 3.8e-17 93.2 232 30.6
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 2.7e-15 87.0 66 63.6
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 2.7e-15 87.0 66 63.6
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 1.1e-08 65.1 229 27.1


User provided reference genes

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