Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21476 Striga asiatica HOM05D006063 ORTHO05D000023 0.0e+00 1222.6 720 100.0
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 1.0e-174 617.8 616 57.1
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 9.9e-170 601.3 608 55.9
SalBow1G1068 Salvia bowleyana HOM05D006063 ORTHO05D000023 4.1e-168 595.9 607 55.5
SalBow1G3325 Salvia bowleyana HOM05D006063 ORTHO05D000023 5.2e-163 578.9 740 51.8
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 2.5e-112 410.6 563 46.2
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 1.5e-104 384.8 635 41.9
Cc09_g03150 Coffea canephora HOM05D006063 ORTHO05D000023 5.5e-104 382.9 605 42.5
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 3.6e-103 380.2 625 41.6
Peaxi162Scf00071g01413 Petunia axillaris HOM05D006063 ORTHO05D000023 5.2e-102 376.3 564 44.7
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 1.5e-101 374.8 596 42.4
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 2.6e-101 374.0 617 42.9
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 1.3e-100 371.7 746 39.8
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 3.7e-100 370.2 700 38.4
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 1.3e-97 361.7 666 38.9
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 4.7e-95 353.2 633 40.1
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 1.1e-91 342.0 700 36.9
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 2.4e-91 340.9 704 37.1
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 5.4e-91 339.7 700 38.7
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 7.0e-91 339.3 734 36.0
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 2.7e-90 337.4 698 35.2
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 4.5e-90 336.7 704 37.2
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 5.9e-90 336.3 708 38.0
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 2.3e-89 334.3 521 41.1
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 6.6e-89 332.8 700 36.6
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 8.6e-89 332.4 710 37.6
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 9.5e-88 328.9 633 38.9
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 1.2e-87 328.6 642 36.6
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 1.2e-87 328.6 609 38.3
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 2.1e-87 327.8 567 39.0
PSO063G1700 Papaver somniferum HOM05D006063 ORTHO05D000023 2.3e-86 324.3 628 37.1
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 4.0e-86 323.6 642 38.5
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 1.2e-85 322.0 617 38.1
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 1.5e-85 321.6 694 36.5
PSO017G2613 Papaver somniferum HOM05D006063 ORTHO05D000023 2.6e-85 320.9 646 36.7
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 3.4e-85 320.5 634 38.0
THA.LOC104820746 Tarenaya hassleriana HOM05D006063 ORTHO05D000023 4.4e-85 320.1 610 37.0
EL10Ac4g09796 Beta vulgaris HOM05D006063 ORTHO05D000023 9.8e-85 318.9 606 37.8
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 9.8e-85 318.9 715 35.2
HanXRQChr15g0491401 Helianthus annuus HOM05D006063 ORTHO05D000023 1.7e-84 318.2 620 37.7
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 4.9e-84 316.6 718 35.4
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 1.4e-83 315.1 635 39.2
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 1.8e-83 314.7 714 35.3
arahy.Tifrunner.gnm1.ann1.2N7XA4 Arachis hypogaea HOM05D006063 ORTHO05D000023 2.4e-83 314.3 507 42.0
arahy.Tifrunner.gnm1.ann1.JVQ2Z4 Arachis hypogaea HOM05D006063 ORTHO05D000023 3.1e-83 313.9 498 42.2
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 7.0e-83 312.8 601 38.1
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 2.0e-82 311.2 706 34.7
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 1.0e-81 308.9 557 39.0
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 1.3e-81 308.5 586 37.7
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 1.7e-81 308.1 556 38.3
Lalb_Chr21g0311331 Lupinus albus HOM05D006063 ORTHO05D000023 1.7e-81 308.1 617 37.6
Lsat_1_v5_gn_9_46040 Lactuca sativa HOM05D006063 ORTHO05D000023 6.6e-81 306.2 608 37.5
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 5.6e-80 303.1 652 37.1
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 7.3e-80 302.8 628 38.2
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 2.8e-79 300.8 578 37.5
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 4.7e-79 300.1 601 37.3
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 1.8e-78 298.1 628 36.5
VMungo0720G1344 Vigna mungo HOM05D006063 ORTHO05D000023 1.2e-77 295.4 614 35.5
Glyma.10G169000 Glycine max HOM05D006063 ORTHO05D000023 1.3e-76 292.0 602 37.4
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 6.4e-76 289.7 624 37.3
ClCG03G011330 Citrullus lanatus HOM05D006063 ORTHO05D000023 8.3e-76 289.3 698 34.1
AUR62005299 Chenopodium quinoa HOM05D006063 ORTHO05D000765 2.4e-75 287.7 505 38.8
A03p33520 Brassica napus HOM05D006063 ORTHO05D000023 2.7e-74 284.3 558 36.4
BraA03t12527Z Brassica rapa HOM05D006063 ORTHO05D000023 1.3e-73 282.0 558 36.6
BcaB04g19349 Brassica carinata HOM05D006063 ORTHO05D000023 1.7e-73 281.6 657 34.7
CiPaw.07G075500 Carya illinoinensis HOM05D006063 ORTHO05D000023 8.6e-73 279.3 478 41.2
BolC3t16339H Brassica oleracea HOM05D006063 ORTHO05D000023 2.5e-72 277.7 560 36.1
Lj2A50T27 Lonicera japonica HOM05D006063 ORTHO05D000023 4.3e-72 276.9 385 42.3
Phvul.L001648 Phaseolus vulgaris HOM05D006063 ORTHO05D000023 4.3e-72 276.9 625 35.2
Lj3g0014127 Lotus japonicus HOM05D006063 ORTHO05D000023 9.5e-72 275.8 615 35.3
BcaC01g04385 Brassica carinata HOM05D006063 ORTHO05D000023 1.2e-71 275.4 556 35.6
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 2.1e-71 274.6 605 35.5
Ca_09979_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 2.8e-71 274.2 609 36.0
Ca_09995_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 2.8e-71 274.2 609 36.0
Dinv03784 Davidia involucrata HOM05D006063 ORTHO05D000023 4.7e-71 273.5 441 39.2
C03p40730 Brassica napus HOM05D006063 ORTHO05D000023 1.1e-70 272.3 606 35.3
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 4.0e-70 270.4 532 37.0
SHI14775 Sapria himalayana HOM05D006063 ORTHO05D000023 2.0e-69 268.1 479 38.4
Medtr1g079470 Medicago truncatula HOM05D006063 ORTHO05D000023 9.8e-69 265.8 621 36.7
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 1.6e-66 258.5 446 38.8
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 4.6e-66 256.9 635 34.5
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 7.8e-66 256.1 739 31.8
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 5.1e-65 253.4 445 38.7
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 2.8e-63 247.7 373 43.4
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 7.3e-56 223.0 673 30.6
Hma1.2p1_0153F.1_g067880 Hydrangea macrophylla HOM05D006063 ORTHO05D000023 4.0e-54 217.2 416 36.3
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 3.4e-53 214.2 386 39.4
ECA232G4499 Erigeron canadensis HOM05D006063 ORTHO05D000023 2.1e-47 194.9 378 40.2
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 3.6e-47 194.1 566 31.4
Zm00001eb086400 Zea mays HOM05D006063 ORTHO05D000023 2.0e-45 188.3 463 33.9
Atru.chr2.1232 Acer truncatum HOM05D006063 ORTHO05D000023 2.4e-43 181.4 338 36.1
Mapoly0001s0430 Marchantia polymorpha HOM05D006063 ORTHO05D000023 4.2e-43 180.6 664 28.6
GSVIVG01026370001 Vitis vinifera HOM05D006063 ORTHO05D000023 4.2e-43 180.6 227 50.7
TPR.G10281 Trifolium pratense HOM05D006063 ORTHO05D000023 2.1e-42 178.3 362 34.8
Os04g0349401 Oryza sativa ssp. japonica HOM05D006063 ORTHO05D000023 1.0e-41 176.0 381 35.2
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 4.3e-40 170.6 422 34.1
Psat6g141160 Pisum sativum HOM05D006063 ORTHO05D000023 6.2e-39 166.8 385 37.1
A05p43190 Brassica napus HOM05D006063 ORTHO05D000023 3.1e-38 164.5 380 35.5
AagrBONN_evm.TU.Sc2ySwM_362.520 Anthoceros agrestis HOM05D006063 ORTHO05D000023 5.3e-38 163.7 531 28.8
SMO351G0027 Selaginella moellendorffii HOM05D006063 ORTHO05D000023 1.4e-35 155.6 584 27.9
Pp3c17_4760 Physcomitrium patens HOM05D006063 ORTHO05D000023 6.0e-34 150.2 438 31.3
CDE05G3203 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 1.8e-33 148.7 259 41.7
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 8.7e-33 146.4 253 40.7
FvH4_5g38930 Fragaria vesca HOM05D006063 ORTHO05D000023 2.5e-32 144.8 269 41.3
HPP92_006233 Vanilla planifolia HOM05D006063 ORTHO05D000023 1.1e-27 129.4 337 33.5
Atru.chr2.1231 Acer truncatum HOM05D006063 ORTHO05D000023 2.7e-26 124.8 163 51.5
DCAR_005531 Daucus carota HOM05D006063 ORTHO05D000023 3.5e-26 124.4 292 31.5
CDE05G2869 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 4.3e-24 117.5 209 37.3
CsaV3_1G044530 Cucumis sativus L. HOM05D006063 ORTHO05D000023 4.2e-19 100.9 135 46.7
HPP92_006232 Vanilla planifolia HOM05D006063 ORTHO05D000023 9.3e-19 99.8 234 32.9
SEGI_40887 Sequoiadendron giganteum HOM05D006063 ORTHO05D000023 8.7e-17 93.2 210 36.7
A05p43200 Brassica napus HOM05D000005 ORTHO05D000449 1.1e-16 92.8 159 45.9
SalBow6G0205 Salvia bowleyana HOM05D050310 ORTHO05D000023 3.3e-16 91.3 113 48.7
unitig_46.g17983 Utricularia gibba HOM05D006063 ORTHO05D000023 1.1e-14 86.3 131 40.5
Cpa.g.sc51.65 Carica papaya HOM05D006063 ORTHO05D000023 3.4e-13 81.3 140 35.7
BraA05t23062Z Brassica rapa HOM05D006063 ORTHO05D000023 4.5e-13 80.9 74 62.2
RcHm_v2.0_Chr3g0448831 Rosa chinensis HOM05D006063 ORTHO05D000023 4.6e-10 70.9 138 37.7


User provided reference genes

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