Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21447 Striga asiatica HOM05D003984 ORTHO05D004740 8.9e-145 516.9 262 100.0
MSTRG.27450 Avicennia marina HOM05D003984 ORTHO05D004740 2.7e-133 478.8 261 92.0
Migut.F02015 Erythranthe guttata HOM05D003984 ORTHO05D004740 1.9e-131 472.6 262 90.1
Nitab4.5_0000830g0100 Nicotiana tabacum HOM05D003984 ORTHO05D004740 2.5e-131 472.2 259 89.6
Oeu055063.1 Olea europaea HOM05D003984 ORTHO05D004740 1.2e-130 469.9 261 89.3
Nitab4.5_0001248g0030 Nicotiana tabacum HOM05D003984 ORTHO05D004740 3.6e-130 468.4 259 89.2
QL08p057270 Quercus lobata HOM05D003984 ORTHO05D004740 3.6e-130 468.4 259 89.6
Cc09_g02350 Coffea canephora HOM05D003984 ORTHO05D004740 8.1e-130 467.2 259 89.2
SGA_v2.0_scaffold329G48849 Striga asiatica HOM05D003984 ORTHO05D004740 8.1e-130 467.2 261 90.4
Dinv11820 Davidia involucrata HOM05D003984 ORTHO05D004740 4.0e-129 464.9 259 88.0
CiPaw.01G278000 Carya illinoinensis HOM05D003984 ORTHO05D004740 9.0e-129 463.8 259 87.3
Solyc04g049710.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 2.0e-128 462.6 259 88.4
Sopen04g019960 Solanum pennellii HOM05D003984 ORTHO05D004740 2.6e-128 462.2 259 88.4
Cfa001574 Carpinus fangiana HOM05D003984 ORTHO05D004740 5.8e-128 461.1 259 88.0
MD07G1182100 Malus domestica HOM05D003984 ORTHO05D004740 7.6e-128 460.7 259 88.0
Peaxi162Scf01024g00120 Petunia axillaris HOM05D003984 ORTHO05D004740 7.6e-128 460.7 259 88.8
Manes.10G040500 Manihot esculenta HOM05D003984 ORTHO05D004740 1.3e-127 459.9 259 89.2
Prupe.2G220800 Prunus persica HOM05D003984 ORTHO05D004740 1.3e-127 459.9 259 87.3
RcHm_v2.0_Chr1g0364411 Rosa chinensis HOM05D003984 ORTHO05D004740 1.3e-127 459.9 259 87.6
COL.COLO4_23777 Corchorus olitorius HOM05D003984 ORTHO05D004740 1.7e-127 459.5 259 87.6
MD01G1114200 Malus domestica HOM05D003984 ORTHO05D004740 4.9e-127 458.0 259 87.6
Dinv31376 Davidia involucrata HOM05D003984 ORTHO05D004740 6.4e-127 457.6 259 87.3
CANSAT56G1305 Cannabis sativa HOM05D003984 ORTHO05D004740 1.9e-126 456.1 261 85.8
CiPaw.02G177500 Carya illinoinensis HOM05D003984 ORTHO05D004740 1.9e-126 456.1 260 87.7
Manes.07G104700 Manihot esculenta HOM05D003984 ORTHO05D004740 9.3e-126 453.8 259 88.0
Peaxi162Scf00195g00824 Petunia axillaris HOM05D003984 ORTHO05D004740 1.2e-125 453.4 259 86.9
Atru.chr12.610 Acer truncatum HOM05D003984 ORTHO05D004740 7.8e-125 450.7 259 87.3
CSS0025505 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 7.8e-125 450.7 259 84.9
Nitab4.5_0000691g0240 Nicotiana tabacum HOM05D003984 ORTHO05D004740 7.8e-125 450.7 261 86.6
Thecc.10G065000 Theobroma cacao HOM05D003984 ORTHO05D004740 7.8e-125 450.7 259 85.7
Actinidia13840 Actinidia chinensis HOM05D003984 ORTHO05D004740 3.0e-124 448.7 259 85.7
CSS0036351 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 6.6e-124 447.6 259 84.6
Potri.008G046000 Populus trichocarpa HOM05D003984 ORTHO05D004740 6.6e-124 447.6 259 87.3
PGSC0003DMG400032551 Solanum tuberosum HOM05D003984 ORTHO05D004740 1.1e-123 446.8 259 86.9
Medtr1g116240 Medicago truncatula HOM05D003984 ORTHO05D004740 3.3e-123 445.3 259 85.7
ClCG09G020350 Citrullus lanatus HOM05D003984 ORTHO05D004740 4.3e-123 444.9 261 85.1
Ciclev10032445m.g Citrus clementina HOM05D003984 ORTHO05D004740 9.6e-123 443.7 260 85.8
CsaV3_5G026080 Cucumis sativus L. HOM05D003984 ORTHO05D004740 9.6e-123 443.7 261 84.7
Lj8A94T49 Lonicera japonica HOM05D003984 ORTHO05D004740 9.6e-123 443.7 262 84.0
CSS0011111 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.6e-122 443.0 259 85.7
GSVIVG01032647001 Vitis vinifera HOM05D003984 ORTHO05D004740 1.6e-122 443.0 259 85.7
CAN.G186.31 Capsicum annuum HOM05D003984 ORTHO05D004740 2.8e-122 442.2 259 84.9
FAN10G1795 Fragaria x ananassa HOM05D003984 ORTHO05D004740 2.8e-122 442.2 261 84.7
Lj5g0020432 Lotus japonicus HOM05D003984 ORTHO05D004740 2.8e-122 442.2 259 85.3
FAN06G2832 Fragaria x ananassa HOM05D003984 ORTHO05D004740 6.2e-122 441.0 261 84.3
Solyc04g009550.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 6.2e-122 441.0 259 85.3
TWI15G0393 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 6.2e-122 441.0 259 85.7
Duzib114G0791 Durio zibethinus HOM05D003984 ORTHO05D004740 8.1e-122 440.7 261 85.4
FAN03G0045 Fragaria x ananassa HOM05D003984 ORTHO05D004740 8.1e-122 440.7 261 83.9
EL10Ac2g03538 Beta vulgaris HOM05D003984 ORTHO05D004740 3.1e-121 438.7 260 86.2
FvH4_7g20520 Fragaria vesca HOM05D003984 ORTHO05D004740 3.1e-121 438.7 261 83.5
Nitab4.5_0004104g0120 Nicotiana tabacum HOM05D003984 ORTHO05D004740 3.1e-121 438.7 250 87.2
Oeu057248.1 Olea europaea HOM05D003984 ORTHO05D004740 3.1e-121 438.7 254 85.4
PGR044G2197 Punica granatum HOM05D003984 ORTHO05D004740 3.1e-121 438.7 259 86.5
Migut.F01787 Erythranthe guttata HOM05D003984 ORTHO05D004740 4.0e-121 438.3 262 84.4
Sabra08G0032300 Salix brachista HOM05D003984 ORTHO05D004740 6.9e-121 437.6 267 83.9
Potri.010G215500 Populus trichocarpa HOM05D003984 ORTHO05D004740 9.0e-121 437.2 261 85.8
AUR62036011 Chenopodium quinoa HOM05D003984 ORTHO05D004740 1.2e-120 436.8 259 84.9
TPR.G10390 Trifolium pratense HOM05D003984 ORTHO05D004740 2.0e-120 436.0 260 84.6
Rhsim09G0154900 Rhododendron simsii HOM05D003984 ORTHO05D004740 2.6e-120 435.6 250 86.4
Lalb_Chr21g0307521 Lupinus albus HOM05D003984 ORTHO05D004740 4.5e-120 434.9 266 83.1
Duzib128G0096 Durio zibethinus HOM05D003984 ORTHO05D004740 5.8e-120 434.5 262 85.1
Sed0003028 Sechium edule HOM05D003984 ORTHO05D004740 7.6e-120 434.1 259 83.0
TAR633G2252 Trochodendron aralioides HOM05D003984 ORTHO05D004740 1.3e-119 433.3 259 81.9
Psat6g240040 Pisum sativum HOM05D003984 ORTHO05D004740 2.2e-119 432.6 259 83.8
Lalb_Chr06g0164371 Lupinus albus HOM05D003984 ORTHO05D004740 2.9e-119 432.2 259 84.2
Glyma.10G294300 Glycine max HOM05D003984 ORTHO05D004740 8.4e-119 430.6 259 82.6
CSS0002243 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.4e-118 429.9 255 85.5
VMungo0720G0811 Vigna mungo HOM05D003984 ORTHO05D004740 1.4e-118 429.9 260 83.8
Nn2g10608 Nelumbo nucifera HOM05D003984 ORTHO05D004740 3.2e-118 428.7 261 80.8
Glyma.20G244200 Glycine max HOM05D003984 ORTHO05D004740 7.1e-118 427.6 259 81.9
TWI63G0288 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 1.2e-117 426.8 257 84.0
Hund22456 Selenicereus undatus HOM05D003984 ORTHO05D004740 3.5e-117 425.2 260 83.8
Lalb_Chr02g0144171 Lupinus albus HOM05D003984 ORTHO05D004740 7.9e-117 424.1 262 81.7
Phvul.007G005800 Phaseolus vulgaris HOM05D003984 ORTHO05D004740 1.3e-116 423.3 260 82.7
Gohir.D10G216200 Gossypium hirsutum HOM05D003984 ORTHO05D004740 3.9e-116 421.8 259 81.5
Gorai.011G241800 Gossypium raimondii HOM05D003984 ORTHO05D004740 6.7e-116 421.0 259 81.5
Eucgr.J01137 Eucalyptus grandis HOM05D003984 ORTHO05D004740 8.7e-116 420.6 259 83.4
SalBow3G2899 Salvia bowleyana HOM05D003984 ORTHO05D004740 1.1e-115 420.2 256 84.0
DCAR_019150 Daucus carota HOM05D003984 ORTHO05D004740 1.5e-115 419.9 259 80.7
Ah.10g033080 Amaranthus hybridus HOM05D003984 ORTHO05D004740 1.9e-115 419.5 283 77.4
AUR62041612 Chenopodium quinoa HOM05D003984 ORTHO05D004740 2.5e-115 419.1 286 76.2
DCAR_015251 Daucus carota HOM05D003984 ORTHO05D004740 2.5e-115 419.1 250 83.2
Gohir.A10G208060 Gossypium hirsutum HOM05D003984 ORTHO05D004740 7.4e-115 417.5 259 81.5
Gorai.012G092700 Gossypium raimondii HOM05D003984 ORTHO05D004740 9.6e-115 417.2 259 80.3
Gohir.A05G343700 Gossypium hirsutum HOM05D003984 ORTHO05D004740 1.3e-114 416.8 259 80.3
Nn2g12956 Nelumbo nucifera HOM05D003984 ORTHO05D004740 2.1e-114 416.0 260 79.6
arahy.Tifrunner.gnm1.ann1.V3HSKN Arachis hypogaea HOM05D003984 ORTHO05D004740 4.8e-114 414.8 259 81.1
TAR623G0696 Trochodendron aralioides HOM05D003984 ORTHO05D004740 4.8e-114 414.8 251 81.3
Lj1A928T58 Lonicera japonica HOM05D003984 ORTHO05D004740 1.8e-113 412.9 300 72.0
Sed0000226 Sechium edule HOM05D003984 ORTHO05D004740 2.6e-112 409.1 261 79.3
Haze_16954 Corylus avellana HOM05D003984 ORTHO05D004740 7.6e-112 407.5 230 86.1
HanXRQChr12g0367731 Helianthus annuus HOM05D003984 ORTHO05D004740 1.7e-111 406.4 259 78.0
THA.LOC104825886 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 1.7e-111 406.4 257 79.4
Sabra10G0166500 Salix brachista HOM05D003984 ORTHO05D004740 1.1e-110 403.7 284 75.4
PSO384G2137 Papaver somniferum HOM05D003984 ORTHO05D004740 1.9e-110 402.9 261 78.9
ECA238G2056 Erigeron canadensis HOM05D003984 ORTHO05D004740 9.3e-110 400.6 259 77.6
PSO339G0239 Papaver somniferum HOM05D003984 ORTHO05D004740 1.6e-109 399.8 259 78.8
Aqoxy4G03159 Aquilegia oxysepala HOM05D003984 ORTHO05D004740 1.3e-108 396.7 274 75.2
THA.LOC104810167 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 8.7e-108 394.0 250 79.6
THA.LOC104824242 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 3.3e-107 392.1 260 77.7
ATR0594G132 Amborella trichopoda HOM05D003984 ORTHO05D004740 9.6e-107 390.6 260 75.8
arahy.Tifrunner.gnm1.ann1.B234YK Arachis hypogaea HOM05D003984 ORTHO05D004740 4.8e-106 388.3 312 67.0
PSO339G2647 Papaver somniferum HOM05D003984 ORTHO05D004740 4.8e-106 388.3 263 76.4
CDE09G0608 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 1.1e-105 387.1 260 74.6
HanXRQChr07g0200921 Helianthus annuus HOM05D003984 ORTHO05D004740 1.8e-105 386.3 259 76.1
Lsat_1_v5_gn_2_115481 Lactuca sativa HOM05D003984 ORTHO05D004740 4.5e-104 381.7 252 77.4
Aa31sc33G70 Aethionema arabicum HOM05D003984 ORTHO05D004740 1.3e-103 380.2 258 75.6
Os11g0102600 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 1.7e-103 379.8 257 73.9
Os12g0102200 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 1.7e-103 379.8 257 73.9
unitig_0.g190 Utricularia gibba HOM05D003984 ORTHO05D004740 3.2e-102 375.6 235 80.4
AL5G36110 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 7.1e-102 374.4 259 73.7
Lsat_1_v5_gn_8_21240 Lactuca sativa HOM05D003984 ORTHO05D004740 1.2e-101 373.6 261 73.6
AT3G55000 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 2.1e-101 372.9 259 74.1
Ca_11380_v3 Cicer arietinum L. HOM05D003984 ORTHO05D004740 2.7e-101 372.5 267 73.4
Carub.0005s2162 Capsella rubella HOM05D003984 ORTHO05D004740 1.3e-100 370.2 259 73.4
HPP92_019786 Vanilla planifolia HOM05D003984 ORTHO05D004740 3.0e-100 369.0 260 72.3
Lj1C926T5 Lonicera japonica HOM05D003984 ORTHO05D004740 5.1e-100 368.2 260 72.7
MSTRG.9196 Avicennia marina HOM05D003984 ORTHO05D004740 1.1e-99 367.1 199 93.0
Zm00001eb094350 Zea mays HOM05D003984 ORTHO05D004740 1.5e-99 366.7 257 72.4
HanXRQChr14g0460861 Helianthus annuus HOM05D003984 ORTHO05D004740 1.9e-99 366.3 259 74.1
Sp5g07420 Schrenkiella parvula HOM05D003984 ORTHO05D004740 2.5e-99 365.9 259 72.6
Thhalv10010647m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 9.7e-99 364.0 259 73.0
HPP92_017944 Vanilla planifolia HOM05D003984 ORTHO05D004740 9.7e-99 364.0 261 71.6
AL5G36120 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 8.2e-98 360.9 261 72.4
Gohir.D04G082100 Gossypium hirsutum HOM05D003984 ORTHO05D004740 1.4e-97 360.1 227 79.3
CDE02G0952 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 3.1e-97 359.0 253 72.3
CARHR165000 Cardamine hirsuta HOM05D003984 ORTHO05D004740 5.3e-97 358.2 259 73.0
Zm00001eb163130 Zea mays HOM05D003984 ORTHO05D004740 5.3e-97 358.2 257 71.6
BcaB02g07705 Brassica carinata HOM05D003984 ORTHO05D004740 1.5e-96 356.7 259 71.8
C06p22550 Brassica napus HOM05D003984 ORTHO05D004740 2.0e-96 356.3 259 71.0
Sc20g0002240 Simmondsia chinensis HOM05D003984 ORTHO05D004740 2.6e-96 355.9 259 71.0
A07p22390 Brassica napus HOM05D003984 ORTHO05D004740 4.5e-96 355.1 259 71.4
BcaC08g44716 Brassica carinata HOM05D003984 ORTHO05D004740 1.3e-95 353.6 259 70.3
Carub.0005s2163 Capsella rubella HOM05D003984 ORTHO05D004740 2.2e-95 352.8 261 71.6
BolC6t37445H Brassica oleracea HOM05D003984 ORTHO05D004740 2.9e-95 352.4 259 70.7
AT3G55005 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 3.8e-95 352.1 261 71.3
Sp5g07430 Schrenkiella parvula HOM05D003984 ORTHO05D004740 5.0e-95 351.7 259 72.6
BraA07t29915Z Brassica rapa HOM05D003984 ORTHO05D004740 3.6e-93 345.5 278 67.3
CARHR165010 Cardamine hirsuta HOM05D003984 ORTHO05D004740 2.0e-91 339.7 262 67.9
Sopen04g004710 Solanum pennellii HOM05D003984 ORTHO05D004740 2.8e-90 335.9 198 85.9
MELO3C025490.2 Cucumis melo HOM05D003984 ORTHO05D004740 4.8e-90 335.1 206 83.0
BraA09t40255Z Brassica rapa HOM05D003984 ORTHO05D004740 1.7e-87 326.6 259 65.6
A09p48020 Brassica napus HOM05D003984 ORTHO05D004740 1.6e-85 320.1 259 64.9
C08p30240 Brassica napus HOM05D003984 ORTHO05D004740 1.0e-84 317.4 260 64.6
BcaNung04652 Brassica carinata HOM05D003984 ORTHO05D004740 2.2e-82 309.7 260 63.5
Thhalv10010676m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 3.7e-82 308.9 241 69.3
BcaB01g00136 Brassica carinata HOM05D003984 ORTHO05D004740 3.1e-81 305.8 260 63.1
BolC8t50631H Brassica oleracea HOM05D003984 ORTHO05D004740 3.5e-80 302.4 259 61.4
Sc20g0002230 Simmondsia chinensis HOM05D003984 ORTHO05D004740 6.7e-76 288.1 191 77.0
FAN01G2342 Fragaria x ananassa HOM05D003984 ORTHO05D004740 2.2e-71 273.1 144 91.7
FAN06G1180 Fragaria x ananassa HOM05D003984 ORTHO05D004740 4.7e-69 265.4 168 78.0
AagrBONN_evm.TU.Sc2ySwM_344.1695 Anthoceros agrestis HOM05D003984 ORTHO05D004740 9.8e-43 177.9 213 51.2
SEGI_35779 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 2.9e-42 176.4 240 45.8
Mapoly0066s0078 Marchantia polymorpha HOM05D003984 ORTHO05D004740 6.0e-40 168.7 148 58.8
Pp3c14_5580 Physcomitrium patens HOM05D003984 ORTHO05D004740 6.0e-40 168.7 264 40.9
Actinidia29191 Actinidia chinensis HOM05D003984 ORTHO05D004740 1.0e-39 167.9 115 73.9
Cpa.g.sc1.281 Carica papaya HOM05D003984 ORTHO05D004740 1.9e-38 163.7 107 74.8
FAN06G2469 Fragaria x ananassa HOM05D003984 ORTHO05D004740 2.5e-30 136.7 74 93.2
TAR624G0784 Trochodendron aralioides HOM05D003984 ORTHO05D004740 5.6e-30 135.6 93 72.0
CBR_g37750 Chara braunii HOM05D000019 ORTHO05D000002 3.4e-27 126.3 226 40.3
SEGI_13922 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 1.4e-25 120.9 76 78.9
SMO356G0399 Selaginella moellendorffii HOM05D003984 ORTHO05D004740 2.0e-19 100.5 185 36.8
CBR_g10977 Chara braunii HOM05D003984 ORTHO05D004740 2.1e-16 90.5 182 34.6
AUR62035988 Chenopodium quinoa HOM05D003984 ORTHO05D004740 2.1e-16 90.5 93 52.7
SHI42769 Sapria himalayana HOM05D003984 ORTHO05D004740 3.1e-12 76.6 123 44.7
CSS0046661 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 6.9e-12 75.5 40 85.0
HanXRQChr17g0557371 Helianthus annuus HOM05D000549 ORTHO05D004740 1.2e-11 74.7 40 77.5
Nn6g33815 Nelumbo nucifera HOM05D003984 ORTHO05D004740 1.3e-10 71.2 40 77.5
RcHm_v2.0_Chr2g0140211 Rosa chinensis HOM05D003984 ORTHO05D004740 2.9e-10 70.1 43 69.8
PRCOL_00000040 Prasinoderma coloniale HOM05D003984 ORTHO05D004740 1.6e-08 64.3 136 33.8
MCO05G642 Micromonas commoda HOM05D003984 ORTHO05D004740 1.3e-07 61.2 86 34.9
Sabra18G0026300 Salix brachista HOM05D002732 ORTHO05D002955 6.6e-07 58.9 32 90.6


User provided reference genes

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