Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21430 Striga asiatica HOM05D008287 ORTHO05D010110 1.4e-45 186.0 103 100.0
MSTRG.9186 Avicennia marina HOM05D008287 ORTHO05D010110 2.7e-12 75.5 75 52.0
Migut.F02005 Erythranthe guttata HOM05D008287 ORTHO05D010110 3.9e-11 71.6 75 50.7
Atru.chr12.751 Acer truncatum HOM05D008287 ORTHO05D010110 2.1e-09 65.9 84 40.5
Lalb_Chr19g0129701 Lupinus albus HOM05D008287 ORTHO05D010110 3.6e-09 65.1 76 44.7
Ciclev10033160m.g Citrus clementina HOM05D008287 ORTHO05D010110 1.4e-08 63.2 83 54.2
Gohir.D13G023100 Gossypium hirsutum HOM05D008287 ORTHO05D010110 1.8e-08 62.8 62 51.6
Solyc04g049407.1 Solanum lycopersicum HOM05D008287 ORTHO05D010110 3.1e-08 62.0 75 41.3
Sabra10G0172000 Salix brachista HOM05D008287 ORTHO05D010110 4.0e-08 61.6 61 47.5
Nn2g10792 Nelumbo nucifera HOM05D008287 ORTHO05D010110 5.3e-08 61.2 57 50.9
Sopen04g019400 Solanum pennellii HOM05D008287 ORTHO05D010110 6.9e-08 60.8 75 40.0
Atru.chr12.776 Acer truncatum HOM05D008287 ORTHO05D010110 1.2e-07 60.1 84 38.1
Aqoxy1G01238 Aquilegia oxysepala HOM05D008287 ORTHO05D010110 1.2e-07 60.1 60 48.3
PGSC0003DMG400012876 Solanum tuberosum HOM05D008287 ORTHO05D010110 1.2e-07 60.1 75 40.0
CiPaw.01G272900 Carya illinoinensis HOM05D008287 ORTHO05D010110 1.5e-07 59.7 59 49.2
MD01G1108600 Malus domestica HOM05D008287 ORTHO05D010110 1.5e-07 59.7 83 39.8
Gohir.A13G024200 Gossypium hirsutum HOM05D008287 ORTHO05D010110 2.0e-07 59.3 55 50.9
Gorai.013G025800 Gossypium raimondii HOM05D008287 ORTHO05D010110 2.0e-07 59.3 62 48.4
FAN01G1692 Fragaria x ananassa HOM05D008287 ORTHO05D010110 3.4e-07 58.5 32 68.8
FAN10G2561 Fragaria x ananassa HOM05D008287 ORTHO05D010110 3.4e-07 58.5 32 68.8
Hma1.2p1_0063F.1_g034480 Hydrangea macrophylla HOM05D008287 ORTHO05D010110 4.5e-07 58.2 32 71.9
Manes.10G045900 Manihot esculenta HOM05D008287 ORTHO05D010110 4.5e-07 58.2 32 75.0
Phvul.004G082500 Phaseolus vulgaris HOM05D008287 ORTHO05D010110 4.5e-07 58.2 83 39.8
TAR629G1172 Trochodendron aralioides HOM05D008287 ORTHO05D010110 4.5e-07 58.2 32 75.0
FvH4_7g19600 Fragaria vesca HOM05D008287 ORTHO05D010110 5.8e-07 57.8 32 68.8
FAN06G2349 Fragaria x ananassa HOM05D000286 ORTHO05D009721 5.8e-07 57.8 32 68.8
Thecc.10G073600 Theobroma cacao HOM05D008287 ORTHO05D010110 5.8e-07 57.8 79 39.2
Duzib114G0252 Durio zibethinus HOM05D008287 ORTHO05D010110 7.6e-07 57.4 32 71.9
RcHm_v2.0_Chr1g0363411 Rosa chinensis HOM05D008287 ORTHO05D010110 7.6e-07 57.4 32 68.8
HanXRQChr01g0011461 Helianthus annuus HOM05D008287 ORTHO05D010110 9.9e-07 57.0 56 46.4
Potri.010G222400 Populus trichocarpa HOM05D008287 ORTHO05D010110 9.9e-07 57.0 32 71.9
unitig_899.g14438 Utricularia gibba HOM05D008287 ORTHO05D010110 9.9e-07 57.0 75 38.7
Cc06_g14360 Coffea canephora HOM05D008287 ORTHO05D010110 1.7e-06 56.2 87 54.0
Nitab4.5_0000575g0160 Nicotiana tabacum HOM05D008287 ORTHO05D010110 1.7e-06 56.2 32 68.8
Nitab4.5_0010206g0030 Nicotiana tabacum HOM05D008287 ORTHO05D010110 1.7e-06 56.2 32 68.8
Sabra08G0027300 Salix brachista HOM05D008287 ORTHO05D010110 1.7e-06 56.2 32 68.8
ClCG05G021010 Citrullus lanatus HOM05D008287 ORTHO05D010110 2.2e-06 55.8 65 44.6
CsaV3_5G036300 Cucumis sativus L. HOM05D008287 ORTHO05D010110 3.8e-06 55.1 32 68.8
Potri.008G039901 Populus trichocarpa HOM05D008287 ORTHO05D010110 4.9e-06 54.7 32 65.6
Sc09g0006380 Simmondsia chinensis HOM05D008287 ORTHO05D010110 4.9e-06 54.7 32 68.8
TPR.G822 Trifolium pratense HOM05D008287 ORTHO05D010110 4.9e-06 54.7 83 38.6
Prupe.2G213800 Prunus persica HOM05D008287 ORTHO05D010110 6.4e-06 54.3 32 68.8


User provided reference genes

Program Settings