Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 1.7e-111 406.0 206 100.0
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 7.6e-75 284.3 212 70.3
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 2.5e-73 279.3 204 72.1
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 1.8e-63 246.5 172 73.3
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 1.8e-63 246.5 152 80.9
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 3.9e-63 245.4 166 71.7
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 3.9e-63 245.4 166 71.7
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 3.9e-63 245.4 152 79.6
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 1.5e-62 243.4 202 60.9
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 2.0e-62 243.0 154 77.9
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 2.0e-62 243.0 172 70.9
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 2.6e-62 242.7 176 67.6
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 2.6e-62 242.7 160 71.9
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 3.3e-62 242.3 162 73.5
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 4.4e-62 241.9 178 66.9
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 7.4e-62 241.1 149 79.9
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 1.3e-61 240.4 160 71.2
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 1.7e-61 240.0 165 72.1
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 2.2e-61 239.6 154 72.7
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 2.2e-61 239.6 166 70.5
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 3.7e-61 238.8 203 64.5
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 4.8e-61 238.4 177 66.1
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 4.8e-61 238.4 204 63.7
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 6.3e-61 238.0 149 79.2
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 8.2e-61 237.7 152 75.7
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 1.1e-60 237.3 193 66.3
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 1.1e-60 237.3 181 65.7
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 1.4e-60 236.9 193 65.8
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 1.8e-60 236.5 168 69.6
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 1.8e-60 236.5 155 74.2
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 4.1e-60 235.3 190 63.2
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 5.3e-60 235.0 158 72.8
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 6.9e-60 234.6 193 64.2
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 1.5e-59 233.4 179 68.2
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 1.5e-59 233.4 182 67.0
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 1.5e-59 233.4 198 61.1
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 1.5e-59 233.4 190 62.6
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 2.0e-59 233.0 184 63.6
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 3.4e-59 232.3 190 62.1
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 5.9e-59 231.5 153 73.2
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 2.9e-58 229.2 171 64.9
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 6.5e-58 228.0 174 66.1
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 6.5e-58 228.0 174 66.1
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 1.1e-57 227.3 155 71.6
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 1.1e-57 227.3 185 66.5
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 1.4e-57 226.9 194 61.3
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 2.5e-57 226.1 152 70.4
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 2.5e-57 226.1 152 70.4
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 3.2e-57 225.7 164 68.9
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 5.5e-57 224.9 171 64.9
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 7.2e-57 224.6 152 69.7
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 9.4e-57 224.2 193 59.1
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 9.4e-57 224.2 165 66.1
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 1.2e-56 223.8 204 58.8
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 1.2e-56 223.8 142 74.6
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 2.1e-56 223.0 167 68.3
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 2.7e-56 222.6 155 69.0
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 3.6e-56 222.2 183 62.8
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 3.6e-56 222.2 190 61.1
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 4.7e-56 221.9 155 68.4
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 4.7e-56 221.9 193 59.6
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 6.1e-56 221.5 153 69.3
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 6.1e-56 221.5 198 59.1
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 7.9e-56 221.1 150 73.3
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.0e-55 220.7 176 62.5
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 1.8e-55 219.9 198 58.1
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 1.8e-55 219.9 198 57.1
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 1.8e-55 219.9 161 67.1
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 3.9e-55 218.8 176 60.8
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 6.7e-55 218.0 195 59.5
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 6.7e-55 218.0 195 58.5
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 8.8e-55 217.6 186 59.1
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 1.1e-54 217.2 163 66.3
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.3e-53 213.8 173 61.8
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.3e-53 213.8 173 61.8
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 1.7e-53 213.4 129 80.6
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.8e-53 212.6 173 61.3
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 3.1e-52 209.1 181 60.8
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 2.2e-50 203.0 136 69.1
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 8.5e-50 201.1 210 55.2
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 2.1e-48 196.4 145 64.8
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 5.2e-47 191.8 141 69.5
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 2.0e-46 189.9 175 58.9
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 2.6e-46 189.5 154 61.7
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 5.7e-46 188.3 121 71.1
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 1.3e-45 187.2 152 65.1
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 3.7e-45 185.7 198 53.0
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 1.7e-42 176.8 116 70.7
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 3.8e-42 175.6 142 64.8
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 1.2e-40 170.6 147 56.5
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 1.2e-40 170.6 147 56.5
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 4.7e-40 168.7 137 64.2
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 6.8e-39 164.9 152 58.6
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 7.5e-38 161.4 154 51.9
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 2.5e-33 146.4 90 78.9
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 3.6e-32 142.5 187 40.1
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 2.2e-29 133.3 152 44.1
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 3.6e-24 115.9 113 52.2
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 1.4e-23 114.0 113 52.2
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 6.8e-23 111.7 181 37.0
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 3.5e-19 99.4 62 79.0
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 3.6e-16 89.4 141 31.2
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 5.8e-14 82.0 141 34.0
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.9e-12 77.0 81 50.6
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.9e-12 77.0 175 37.7
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 3.2e-12 76.3 204 29.9
Oeu034116.1 Olea europaea HOM05D007188 ORTHO05D009102 9.2e-12 74.7 51 76.5
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 3.5e-11 72.8 122 29.5
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 3.9e-10 69.3 44 77.3
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 2.1e-08 63.5 72 51.4
vmacro04837 Vaccinium macrocarpon HOM05D000026 ORTHO05D000094 6.2e-08 62.0 43 69.8
Lalb_Chr21g0313491 Lupinus albus HOM05D007188 ORTHO05D009102 1.4e-07 60.8 71 47.9
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 5.2e-07 58.9 44 54.5


User provided reference genes

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