Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21353 Striga asiatica HOM05D058974 ORTHO05D402092 6.0e-135 484.2 245 100.0
SGA_v2.0_scaffold20G08979 Striga asiatica HOM05D058974 ORTHO05D404989 1.0e-89 334.0 210 84.3
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 4.4e-13 79.3 56 76.8
Oeu054695.1 Olea europaea HOM05D000443 ORTHO05D001066 2.4e-11 73.6 65 53.8
SalBow7G1967 Salvia bowleyana HOM05D000443 ORTHO05D001066 2.7e-10 70.1 65 52.3
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 3.0e-09 66.6 34 91.2
Migut.C00832 Erythranthe guttata HOM05D000443 ORTHO05D001066 3.9e-09 66.2 59 54.2
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 8.7e-09 65.1 37 81.1
unitig_749.g13893 Utricularia gibba HOM05D000443 ORTHO05D001066 7.3e-08 62.0 59 54.2
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 1.6e-07 60.8 35 80.0
SGA_v2.0_scaffold92G28231 Striga asiatica HOM05D000443 ORTHO05D001066 2.1e-07 60.5 49 61.2
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 2.8e-07 60.1 48 64.6
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 4.8e-07 59.3 33 81.8
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 4.8e-07 59.3 33 81.8
Actinidia16988 Actinidia chinensis HOM05D000443 ORTHO05D001066 6.2e-07 58.9 53 60.4
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 6.2e-07 58.9 33 78.8
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 6.2e-07 58.9 33 78.8
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 1.1e-06 58.2 34 79.4
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 1.1e-06 58.2 32 81.2
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 1.1e-06 58.2 33 78.8
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 1.4e-06 57.8 33 78.8
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 1.8e-06 57.4 31 87.1
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 1.8e-06 57.4 32 78.1
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 1.8e-06 57.4 33 81.8
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 2.4e-06 57.0 32 81.2
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 2.4e-06 57.0 33 75.8
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 4.0e-06 56.2 73 49.3
Eucgr.G01751 Eucalyptus grandis HOM05D000443 ORTHO05D001066 4.0e-06 56.2 62 43.5
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 5.3e-06 55.8 32 75.0
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 5.3e-06 55.8 32 78.1
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 6.9e-06 55.5 32 78.1
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 6.9e-06 55.5 32 81.2
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 6.9e-06 55.5 33 78.8
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 6.9e-06 55.5 33 78.8
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 9.0e-06 55.1 32 78.1
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 9.0e-06 55.1 32 78.1
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 9.0e-06 55.1 32 78.1
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 9.0e-06 55.1 34 73.5
HanXRQChr17g0567461 Helianthus annuus HOM05D000443 ORTHO05D001066 9.0e-06 55.1 55 58.2
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 9.0e-06 55.1 33 72.7


User provided reference genes

Program Settings