Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 4.3e-147 524.6 261 100.0
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 3.3e-115 418.7 252 79.4
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 7.6e-112 407.5 260 75.4
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 2.9e-111 405.6 243 80.7
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 5.4e-110 401.4 236 80.5
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 1.3e-108 396.7 259 74.1
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 1.5e-107 393.3 260 72.3
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 5.6e-107 391.3 243 76.1
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 1.1e-105 387.1 257 71.6
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 6.9e-105 384.4 260 72.7
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 6.9e-105 384.4 256 71.9
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 9.0e-105 384.0 260 72.7
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 9.9e-104 380.6 260 71.9
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 2.9e-103 379.0 240 74.6
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 2.9e-103 379.0 303 63.7
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 4.9e-103 378.3 260 71.2
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 2.4e-102 375.9 260 71.2
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 3.2e-102 375.6 239 73.6
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 4.2e-102 375.2 242 74.0
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 5.5e-102 374.8 238 72.7
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.6e-101 373.2 252 71.0
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 6.0e-101 371.3 236 73.7
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 7.9e-101 370.9 240 72.5
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 1.8e-100 369.8 259 68.3
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 3.0e-100 369.0 242 72.7
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 1.9e-99 366.3 260 65.4
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 1.9e-99 366.3 240 72.9
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 5.6e-99 364.8 251 69.3
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 1.6e-98 363.2 259 68.3
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 2.8e-98 362.5 238 71.0
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 8.1e-98 360.9 239 71.5
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 1.4e-97 360.1 260 66.5
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 2.4e-97 359.4 241 71.0
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 2.4e-97 359.4 242 71.9
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 4.0e-97 358.6 241 71.0
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 7.6e-96 354.4 241 72.2
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 1.7e-95 353.2 247 69.6
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 1.7e-95 353.2 240 70.4
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 2.2e-95 352.8 260 65.4
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 6.5e-95 351.3 241 68.0
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 8.4e-95 350.9 242 69.8
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.9e-94 349.7 258 67.4
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 3.2e-94 349.0 258 66.7
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 3.2e-94 349.0 241 69.3
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 5.5e-94 348.2 260 65.4
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 9.3e-94 347.4 240 69.6
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 9.3e-94 347.4 239 69.0
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 1.6e-93 346.7 242 68.6
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 3.5e-93 345.5 240 67.5
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 1.8e-92 343.2 241 71.4
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 2.3e-92 342.8 238 69.3
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 3.0e-92 342.4 252 65.5
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 3.9e-92 342.0 241 67.6
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 6.7e-92 341.3 240 67.5
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.9e-91 339.7 272 63.6
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 1.9e-91 339.7 256 65.2
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 7.4e-91 337.8 260 62.3
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 7.4e-91 337.8 241 66.4
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 9.6e-91 337.4 260 62.3
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 1.3e-90 337.0 254 63.8
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 2.8e-90 335.9 238 63.4
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 3.7e-90 335.5 247 65.6
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 8.2e-90 334.3 260 61.5
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.4e-89 333.6 260 60.8
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 1.8e-89 333.2 260 64.2
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 5.3e-89 331.6 255 64.3
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 9.0e-89 330.9 257 61.9
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 9.0e-89 330.9 260 61.2
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 2.6e-88 329.3 250 66.4
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.7e-87 326.6 257 60.7
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 2.2e-87 326.2 246 63.8
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 3.8e-87 325.5 243 64.2
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 5.0e-87 325.1 244 66.0
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 2.5e-86 322.8 260 63.5
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 2.5e-86 322.8 244 63.9
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 3.2e-86 322.4 255 62.4
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 4.2e-86 322.0 241 62.7
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 5.5e-86 321.6 257 61.9
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 3.5e-85 318.9 258 59.3
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 1.0e-84 317.4 290 57.9
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 3.0e-84 315.8 258 59.7
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 3.9e-84 315.5 258 58.9
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 1.1e-78 297.4 189 69.3
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 3.2e-78 295.8 182 75.3
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 2.1e-77 293.1 236 59.3
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 7.9e-77 291.2 182 74.2
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 1.8e-76 290.0 232 58.6
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 8.8e-76 287.7 232 58.2
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 6.9e-73 278.1 183 72.1
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 1.7e-71 273.5 186 68.8
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 1.2e-69 267.3 237 59.1
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 6.1e-69 265.0 182 67.0
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 3.3e-67 259.2 182 67.0
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.3e-66 257.3 209 62.2
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 6.3e-66 255.0 181 65.2
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 5.3e-65 251.9 235 49.4
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 2.6e-64 249.6 236 49.2
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 8.5e-63 244.6 180 66.1
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 1.9e-62 243.4 235 48.1
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 3.0e-60 236.1 178 65.7
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 5.7e-59 231.9 205 53.2
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 7.5e-59 231.5 230 47.8
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 1.0e-55 221.1 250 46.8
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 2.9e-55 219.5 215 49.3
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 1.9e-54 216.9 232 46.1
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 6.8e-52 208.4 147 60.5
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 5.9e-48 195.3 109 74.3
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 2.6e-43 179.9 179 43.6
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 8.0e-37 158.3 183 47.0
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 3.4e-35 152.9 240 42.1
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 3.2e-33 146.4 207 35.3
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 3.4e-27 126.3 106 60.4
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 1.7e-23 114.0 241 29.0


User provided reference genes

Program Settings