Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 2.2e-73 278.9 139 100.0
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 4.4e-34 148.3 145 55.9
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 6.0e-31 137.9 148 54.7
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 4.7e-28 128.3 141 47.5
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 2.9e-25 119.0 144 46.5
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 4.6e-23 111.7 140 47.9
unitig_746.g26629 Utricularia gibba HOM05D007333 ORTHO05D008874 4.7e-20 101.7 131 43.5
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 1.8e-19 99.8 132 44.7
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 4.0e-19 98.6 132 46.2
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 1.2e-18 97.1 128 46.1
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 1.5e-18 96.7 127 46.5
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 3.4e-18 95.5 128 46.1
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 4.6e-15 85.1 128 36.7
vmacro10268 Vaccinium macrocarpon HOM05D007333 ORTHO05D008874 3.9e-14 82.0 141 34.8
MSTRG.8114 Avicennia marina HOM05D007333 ORTHO05D008874 8.7e-14 80.9 112 47.3
HanXRQChr14g0456271 Helianthus annuus HOM05D007333 ORTHO05D008874 8.7e-14 80.9 130 40.8
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 1.5e-13 80.1 132 41.7
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 1.5e-13 80.1 130 36.2
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 2.5e-13 79.3 135 38.5
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 9.6e-13 77.4 91 45.1
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 9.6e-13 77.4 129 36.4
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 1.3e-12 77.0 134 32.1
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 4.8e-12 75.1 112 39.3
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 6.2e-12 74.7 87 41.4
ECA238G3189 Erigeron canadensis HOM05D007333 ORTHO05D008874 8.1e-12 74.3 70 48.6
Actinidia34782 Actinidia chinensis HOM05D007333 ORTHO05D008874 1.1e-11 73.9 80 48.8
Lsat_1_v5_gn_2_102881 Lactuca sativa HOM05D007333 ORTHO05D008874 1.1e-11 73.9 71 53.5
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 1.1e-11 73.9 139 36.7
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 1.4e-11 73.6 133 31.6
Aqoxy2G01500 Aquilegia oxysepala HOM05D007333 ORTHO05D008874 2.4e-11 72.8 139 33.1
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 2.4e-11 72.8 67 49.3
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 2.4e-11 72.8 133 36.1
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 4.0e-11 72.0 131 32.8
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 4.0e-11 72.0 113 38.1
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 4.0e-11 72.0 144 36.1
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 5.3e-11 71.6 113 38.1
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 9.0e-11 70.9 120 32.5
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 1.2e-10 70.5 131 38.2
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 1.2e-10 70.5 144 38.2
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 1.2e-10 70.5 138 34.8
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 1.5e-10 70.1 83 48.2
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 2.6e-10 69.3 137 36.5
Actinidia38900 Actinidia chinensis HOM05D007333 ORTHO05D008874 3.4e-10 68.9 124 38.7
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 3.4e-10 68.9 143 34.3
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 4.4e-10 68.6 129 30.2
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 4.4e-10 68.6 117 38.5
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 5.8e-10 68.2 156 35.9
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 7.6e-10 67.8 92 43.5
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 2.9e-09 65.9 94 43.6
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 2.9e-09 65.9 94 43.6
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 4.9e-09 65.1 121 33.9
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 4.9e-09 65.1 129 30.2
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 4.9e-09 65.1 84 41.7
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 4.9e-09 65.1 145 34.5
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 6.4e-09 64.7 124 36.3
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 6.4e-09 64.7 130 34.6
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 6.4e-09 64.7 131 33.6
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 6.4e-09 64.7 131 33.6
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.1e-08 63.9 131 33.6
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 1.1e-08 63.9 81 39.5
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 1.4e-08 63.5 65 46.2
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 1.4e-08 63.5 141 31.2
AL5G32820 Arabidopsis lyrata HOM05D007333 ORTHO05D008874 1.9e-08 63.2 63 49.2
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 1.9e-08 63.2 122 30.3
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 2.4e-08 62.8 125 33.6
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 2.4e-08 62.8 95 38.9
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 4.2e-08 62.0 124 34.7
ECA233G0976 Erigeron canadensis HOM05D007333 ORTHO05D008874 4.2e-08 62.0 84 39.3
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 5.4e-08 61.6 147 32.0
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 7.1e-08 61.2 136 33.8
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 7.1e-08 61.2 139 34.5
BraA09t39992Z Brassica rapa HOM05D007333 ORTHO05D008874 7.1e-08 61.2 74 44.6
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 9.3e-08 60.8 145 33.8
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 9.3e-08 60.8 94 42.6
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 9.3e-08 60.8 129 31.8
AT3G52230 Arabidopsis thaliana HOM05D007333 ORTHO05D008874 1.2e-07 60.5 69 46.4
Phvul.007G105600 Phaseolus vulgaris HOM05D007333 ORTHO05D008874 1.2e-07 60.5 79 40.5
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 1.2e-07 60.5 129 31.0
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 1.6e-07 60.1 120 36.7
Glyma.10G201500 Glycine max HOM05D007333 ORTHO05D008874 1.6e-07 60.1 85 37.6
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 1.6e-07 60.1 111 35.1
A09p45290 Brassica napus HOM05D007333 ORTHO05D008874 2.1e-07 59.7 95 40.0
PSO339G5821 Papaver somniferum HOM05D007333 ORTHO05D008874 2.7e-07 59.3 60 43.3
VMungo0720G1448 Vigna mungo HOM05D007333 ORTHO05D008874 2.7e-07 59.3 96 34.4
Aa31LG10G7320 Aethionema arabicum HOM05D007333 ORTHO05D008874 3.5e-07 58.9 84 44.0
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 3.5e-07 58.9 42 50.0
CSS0002382 Camellia sinensis var. sinensis HOM05D007333 ORTHO05D008874 4.6e-07 58.5 106 35.8
CARHR162000 Cardamine hirsuta HOM05D007333 ORTHO05D008874 6.0e-07 58.2 78 42.3
Thhalv10010807m.g Eutrema salsugineum HOM05D007333 ORTHO05D008874 7.9e-07 57.8 39 61.5
Glyma.20G188900 Glycine max HOM05D007333 ORTHO05D008874 7.9e-07 57.8 68 41.2
TPR.G2540 Trifolium pratense HOM05D007333 ORTHO05D008874 7.9e-07 57.8 140 28.6
HPP92_009761 Vanilla planifolia HOM05D065211 ORTHO05D008874 1.3e-06 57.0 91 35.2
SEGI_06473 Sequoiadendron giganteum HOM05D007333 ORTHO05D008874 1.7e-06 56.6 80 40.0
A04p07130 Brassica napus HOM05D007333 ORTHO05D008874 3.9e-06 55.5 49 53.1
Nn2g13958 Nelumbo nucifera HOM05D007333 ORTHO05D008874 6.6e-06 54.7 38 55.3


User provided reference genes

Program Settings